| scholarly article | Q13442814 |
| P50 | author | Silin Zhong | Q58071783 |
| Chuanyou Li | Q64679222 | ||
| Jiuhai Zhao | Q80474963 | ||
| Minmin Du | Q85638918 | ||
| David T W Tzeng | Q86887025 | ||
| Tianxia Yang | Q88579722 | ||
| Qingzhe Zhai | Q88579726 | ||
| Qiaomei Wang | Q88579728 | ||
| Chang-Bao Li | Q88579730 | ||
| P2093 | author name string | Ming Zhou | |
| Lei Deng | |||
| Qian Chen | |||
| Fangming Wu | |||
| Yuanyuan Liu | |||
| Zhuo Huang | |||
| P2860 | cites work | Model-based analysis of ChIP-Seq (MACS) | Q21183902 |
| TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions | Q21999527 | ||
| The tomato genome sequence provides insights into fleshy fruit evolution | Q22122151 | ||
| Jasmonate-inducible plant enzymes degrade essential amino acids in the herbivore midgut | Q24535827 | ||
| Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor | Q24569663 | ||
| Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities | Q24617969 | ||
| Fast gapped-read alignment with Bowtie 2 | Q27860699 | ||
| The Sequence Alignment/Map format and SAMtools | Q27860966 | ||
| The systemin signaling pathway: differential activation of plant defensive genes | Q28138073 | ||
| ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia | Q28274448 | ||
| The BIG Data Center: from deposition to integration to translation | Q28584452 | ||
| Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 | Q29547403 | ||
| Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens | Q29616814 | ||
| Jasmonates: biosynthesis, perception, signal transduction and action in plant stress response, growth and development. An update to the 2007 review in Annals of Botany | Q30317845 | ||
| The jasmonate-insensitive mutant jin1 shows increased resistance to biotrophic as well as necrotrophic pathogens | Q30320458 | ||
| A transcription factor hierarchy defines an environmental stress response network | Q31140817 | ||
| The basic helix-loop-helix transcription factor MYC2 directly represses PLETHORA expression during jasmonate-mediated modulation of the root stem cell niche in Arabidopsis | Q33352224 | ||
| NINJA connects the co-repressor TOPLESS to jasmonate signalling | Q33768114 | ||
| Distinct roles for jasmonate synthesis and action in the systemic wound response of tomato | Q34029515 | ||
| HISAT: a fast spliced aligner with low memory requirements | Q34043398 | ||
| Jasmonate-triggered plant immunity | Q34086685 | ||
| COI1 links jasmonate signalling and fertility to the SCF ubiquitin-ligase complex in Arabidopsis | Q34160199 | ||
| Large-scale gene function analysis with the PANTHER classification system | Q34358449 | ||
| Pivoting the plant immune system from dissection to deployment | Q34364432 | ||
| Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene | Q34443756 | ||
| StringTie enables improved reconstruction of a transcriptome from RNA-seq reads | Q34463372 | ||
| Plant immunity to insect herbivores | Q34585236 | ||
| The Top 10 fungal pathogens in molecular plant pathology | Q34637164 | ||
| The JAZ family of repressors is the missing link in jasmonate signalling. | Q34652938 | ||
| Phosphorylation-coupled proteolysis of the transcription factor MYC2 is important for jasmonate-signaled plant immunity | Q34671973 | ||
| MEME-ChIP: motif analysis of large DNA datasets | Q35019674 | ||
| Differential accumulation of potato tuber mRNAs during the hypersensitive response induced by arachidonic acid elicitor | Q35052850 | ||
| Role of tomato lipoxygenase D in wound-induced jasmonate biosynthesis and plant immunity to insect herbivores | Q35069196 | ||
| Systemic signaling in the wound response | Q36154065 | ||
| GSA: Genome Sequence Archive | Q36339427 | ||
| Making sense of hormone crosstalk during plant immune responses | Q37186947 | ||
| Networking by small-molecule hormones in plant immunity. | Q37450759 | ||
| Recent advances and emerging trends in plant hormone signalling | Q37530438 | ||
| Systemin/Jasmonate-mediated systemic defense signaling in tomato | Q37847784 | ||
| Plant immunity to necrotrophs | Q38020993 | ||
| MYC2: the master in action | Q38059076 | ||
| Plant signalling components EDS1 and SGT1 enhance disease caused by the necrotrophic pathogen Botrytis cinerea. | Q38301129 | ||
| Genome-wide identification of transcription factor-binding sites in plants using chromatin immunoprecipitation followed by microarray (ChIP-chip) or sequencing (ChIP-seq). | Q38325481 | ||
| Functional genomics of tomato for the study of plant immunity | Q38386888 | ||
| Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter | Q39532162 | ||
| A gapless genome sequence of the fungus Botrytis cinerea | Q39970195 | ||
| Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation. | Q40094438 | ||
| Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis | Q41023009 | ||
| Streaming fragment assignment for real-time analysis of sequencing experiments | Q41849422 | ||
| Tomato protein kinase 1b mediates signaling of plant responses to necrotrophic fungi and insect herbivory. | Q42028742 | ||
| Cloning, expression, and sequence conservation of pathogenesis-related gene transcripts of potato | Q42640814 | ||
| COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility | Q42677452 | ||
| The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor. | Q43283579 | ||
| The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis | Q44097478 | ||
| The tomato mutant spr1 is defective in systemin perception and the production of a systemic wound signal for defense gene expression | Q44311772 | ||
| The tomato suppressor of prosystemin-mediated responses2 gene encodes a fatty acid desaturase required for the biosynthesis of jasmonic acid and the production of a systemic wound signal for defense gene expression | Q44499538 | ||
| The BOTRYTIS SUSCEPTIBLE1 gene encodes an R2R3MYB transcription factor protein that is required for biotic and abiotic stress responses in Arabidopsis | Q44615209 | ||
| The tomato homolog of CORONATINE-INSENSITIVE1 is required for the maternal control of seed maturation, jasmonate-signaled defense responses, and glandular trichome development | Q44701468 | ||
| JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis. | Q44945509 | ||
| The Arabidopsis basic/helix-loop-helix transcription factor family. | Q45933175 | ||
| Crosstalk between biotic and abiotic stress responses in tomato is mediated by the AIM1 transcription factor | Q46163176 | ||
| Wounding of Arabidopsis leaves causes a powerful but transient protection against Botrytis infection. | Q46614834 | ||
| Closely related NAC transcription factors of tomato differentially regulate stomatal closure and reopening during pathogen attack. | Q50650081 | ||
| MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis. | Q52681240 | ||
| A downstream mediator in the growth repression limb of the jasmonate pathway | Q57232384 | ||
| JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling | Q58619723 | ||
| Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis | Q73481409 | ||
| The Activation of the Potato PR-10a Gene Requires the Phosphorylation of the Nuclear Factor PBF-1 | Q74813100 | ||
| Systemin: a polypeptide signal for plant defensive genes | Q77803378 | ||
| The Arabidopsis JAZ2 promoter contains a G-Box and thymidine-rich module that are necessary and sufficient for jasmonate-dependent activation by MYC transcription factors and repression by JAZ proteins | Q82979928 | ||
| Botrytis cinerea manipulates the antagonistic effects between immune pathways to promote disease development in tomato | Q84339726 | ||
| P433 | issue | 8 | |
| P921 | main subject | RNA sequencing | Q2542347 |
| P304 | page(s) | 1883-1906 | |
| P577 | publication date | 2017-07-21 | |
| P1433 | published in | The Plant Cell | Q3988745 |
| P1476 | title | MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato | |
| P478 | volume | 29 |
| Q93032889 | Characterization of Jasmonoyl-Isoleucine (JA-Ile) Hormonal Catabolic Pathways in Rice upon Wounding and Salt Stress |
| Q100634578 | CmLOX10 positively regulates drought tolerance through jasmonic acid -mediated stomatal closure in oriental melon (Cucumis melo var. makuwa Makino) |
| Q58736410 | Comparative RNA-Seq analysis reveals a critical role for brassinosteroids in rose (Rosa hybrida) petal defense against Botrytis cinerea infection |
| Q91823779 | Comparative Transcriptome Profiling Reveals Compatible and Incompatible Patterns of Potato Toward Phytophthora infestans |
| Q92707585 | Construction and characterization of a high-quality cDNA library of Cymbidium faberi suitable for yeast one- and two-hybrid assays |
| Q89601187 | IbBBX24 Promotes the Jasmonic Acid Pathway and Enhances Fusarium Wilt Resistance in Sweet Potato |
| Q64229100 | Induction of resistance to diseases in plant by aerial ultrasound irradiation |
| Q90318196 | Integrated multi-omics framework of the plant response to jasmonic acid |
| Q50421274 | Jasmonate negatively regulates stomatal development in Arabidopsis cotyledons. |
| Q92643378 | MED25 connects enhancer-promoter looping and MYC2-dependent activation of jasmonate signalling |
| Q64230270 | MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop |
| Q89509701 | Manipulation of Jasmonate Signaling by Plant Viruses and Their Insect Vectors |
| Q64102738 | Master MYCs: MYC2, the Jasmonate Signaling "Master Switch" |
| Q64059744 | RNA-Seq analysis reveals transcript diversity and active genes after common cutworm (Spodoptera litura Fabricius) attack in resistant and susceptible wild soybean lines |
| Q92282494 | RNA-seq and ChIP-seq as Complementary Approaches for Comprehension of Plant Transcriptional Regulatory Mechanism |
| Q90286990 | SlMYC1 Regulates Type VI Glandular Trichome Formation and Terpene Biosynthesis in Tomato Glandular Cells |
| Q90700584 | Strigolactones positively regulate defense against root-knot nematodes in tomato |
| Q55417988 | TcMYC2a, a Basic Helix–Loop–Helix Transcription Factor, Transduces JA-Signals and Regulates Taxol Biosynthesis in Taxus chinensis. |
| Q92026233 | The plant Mediator complex and its role in jasmonate signaling |
| Q89719339 | Transcriptome Profiling Analysis Reveals Co-regulation of Hormone Pathways in Foxtail Millet during Sclerospora graminicola Infection |
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