Crosstalk and the Dynamical Modularity of Feed-Forward Loops in Transcriptional Regulatory Networks.

scientific article published on April 2017

Crosstalk and the Dynamical Modularity of Feed-Forward Loops in Transcriptional Regulatory Networks. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.BPJ.2017.02.044
P932PMC publication ID5406374
P698PubMed publication ID28445746

P50authorPreetam GhoshQ61146527
P2093author name stringMichael A Rowland
Michael L Mayo
Ahmed Abdelzaher
P2860cites workThe evolution of genome-scale models of cancer metabolismQ21129241
When less is more: gene loss as an engine of evolutionary changeQ24539958
Gene regulatory networksQ24555729
The incoherent feed-forward loop can generate non-monotonic input functions for genesQ24644242
Survival of the sparsest: robust gene networks are parsimoniousQ24649377
Structure and function of the feed-forward loop network motifQ24683513
Aggregation of topological motifs in the Escherichia coli transcriptional regulatory networkQ24799473
Generation of uncorrelated random scale-free networksQ27349150
Analysis of optimality in natural and perturbed metabolic networksQ28213254
Network motifs: simple building blocks of complex networksQ29547340
Network motifs in the transcriptional regulation network of Escherichia coliQ29547342
Network motifs: theory and experimental approachesQ29615325
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA ToolboxQ29615372
Biological robustnessQ29617468
The evolution of gene regulation by transcription factors and microRNAsQ29617552
Modularity and dynamics of cellular networksQ33267898
Evolutionary microbial genomics: insights into bacterial host adaptationQ33592109
On schemes of combinatorial transcription logicQ33711386
The role of incoherent microRNA-mediated feedforward loops in noise bufferingQ33851558
GeneNetWeaver:in silicobenchmark generation and performance profiling of network inference methodsQ33940337
Spontaneous evolution of modularity and network motifsQ34048031
The incoherent feedforward loop can provide fold-change detection in gene regulationQ34087717
Bacterial adaptation through distributed sensing of metabolic fluxesQ34102801
Theory on the Dynamics of Feedforward Loops in the Transcription Factor NetworksQ34387610
Crosstalk and the evolution of specificity in two-component signalingQ34413937
The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coliQ34483407
Phosphatase specificity and pathway insulation in signaling networksQ35107334
Detailed map of a cis-regulatory input functionQ35146579
The evolution of genetic regulatory systems in bacteriaQ35670177
Kinetic insulation as an effective mechanism for achieving pathway specificity in intracellular signaling networksQ36092552
Evolution by leaps: gene duplication in bacteriaQ37454911
Adaptive mutations that prevent crosstalk enable the expansion of paralogous signaling protein familiesQ42141200
Crosstalk and Competition in Signaling NetworksQ42265191
Understanding modularity in molecular networks requires dynamicsQ43030828
Computational discovery of gene modules and regulatory networksQ44615395
Generating realistic in silico gene networks for performance assessment of reverse engineering methodsQ45719256
Cross talking of network motifs in gene regulation that generates temporal pulses and spatial stripesQ52036513
Multistability and oscillations in genetic control of metabolismQ82789006
P433issue8
P407language of work or nameEnglishQ1860
P304page(s)1539-1550
P577publication date2017-04-01
P1433published inBiophysical JournalQ2032955
P1476titleCrosstalk and the Dynamical Modularity of Feed-Forward Loops in Transcriptional Regulatory Networks
P478volume112

Reverse relations

cites work (P2860)
Q62489667Evolutionary design principles in metabolism
Q92358717Transcriptome analyses of cells carrying the Type II Csp231I restriction-modification system reveal cross-talk between two unrelated transcription factors: C protein and the Rac prophage repressor
Q92311763Using digital organisms to study the evolutionary consequences of whole genome duplication and polyploidy

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