| P50 | author | Bilal A Padder | Q59707469 |
| P2093 | author name string | James D Kelly | |
| | Kelvin Kamfwa | |
| | Halima E Awale | |
| P2860 | cites work | TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions | Q21999527 |
| | Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks | Q24633890 |
| | The Sequence Alignment/Map format and SAMtools | Q27860966 |
| | The Gene Ontology (GO) database and informatics resource | Q27860988 |
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| | Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 | Q29547403 |
| | HTSeq--a Python framework to work with high-throughput sequencing data | Q29614489 |
| | The hemibiotrophic lifestyle of Colletotrichum species | Q30319765 |
| | Structural Modifications and Programmed Cell Death of Chili Pepper Fruit Related to Resistance Responses to Colletotrichum gloeosporioides Infection | Q30849759 |
| | The PERIANTHIA gene encodes a bZIP protein involved in the determination of floral organ number in Arabidopsis thaliana | Q33369041 |
| | Colletotrichum: A model genus for studies on pathology and fungal-plant interactions | Q33707641 |
| | The OXI1 kinase pathway mediates Piriformospora indica-induced growth promotion in Arabidopsis | Q33916524 |
| | A global view of transcriptome dynamics during Sporisorium scitamineum challenge in sugarcane by RNA-Seq | Q34110656 |
| | Changes in spatial and temporal gene expression during incompatible interaction between common bean and anthracnose pathogen. | Q34266649 |
| | Dual-level regulation of ACC synthase activity by MPK3/MPK6 cascade and its downstream WRKY transcription factor during ethylene induction in Arabidopsis | Q34325545 |
| | The small heat shock protein 20 RSI2 interacts with and is required for stability and function of tomato resistance protein I-2. | Q34333943 |
| | Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4. | Q34366055 |
| | Dissecting Phaseolus vulgaris innate immune system against Colletotrichum lindemuthianum infection | Q34389372 |
| | Simultaneous RNA-seq analysis of a mixed transcriptome of rice and blast fungus interaction | Q34472215 |
| | Identification of differentially expressed genes in a resistant versus a susceptible blueberry cultivar after infection by Colletotrichum acutatum. | Q54375213 |
| | Cutadapt removes adapter sequences from high-throughput sequencing reads | Q55953584 |
| | Production of a cell wall-associated endopolygalacturonase by Colletotrichum lindemuthianum and pectin degradation during bean infection | Q57450744 |
| | Fine mapping of the Co-4 locus of common bean reveals a resistance gene candidate, COK-4 , that encodes for a protein kinase | Q58619737 |
| | Arabidopsis WRKY33 is a key transcriptional regulator of hormonal and metabolic responses toward Botrytis cinerea infection | Q60017750 |
| | Resistance to Colletotrichum lindemuthianum in Phaseolus vulgaris: a case study for mapping two independent genes | Q80149217 |
| | Pathogen-induced Arabidopsis WRKY7 is a transcriptional repressor and enhances plant susceptibility to Pseudomonas syringae | Q80236909 |
| | Heterogeneous inbred populations are useful as sources of near-isogenic lines for RAPD marker localization | Q86637823 |
| | Fine mapping of Co-x, an anthracnose resistance gene to a highly virulent strain of Colletotrichum lindemuthianum in common bean | Q87946127 |
| | Rapid transcriptome characterization and parsing of sequences in a non-model host-pathogen interaction; pea-Sclerotinia sclerotiorum | Q34488679 |
| | bZIP transcription factors in Arabidopsis | Q34572869 |
| | Transcription factors in plant defense and stress responses | Q34787026 |
| | Hexose transporters of a hemibiotrophic plant pathogen: functional variations and regulatory differences at different stages of infection | Q35063501 |
| | Candidate Gene Identification with SNP Marker-Based Fine Mapping of Anthracnose Resistance Gene Co-4 in Common Bean | Q35796831 |
| | Genome-Wide Association Study of Anthracnose Resistance in Andean Beans (Phaseolus vulgaris). | Q36043216 |
| | A rice bZIP protein, designated OSBZ8, is rapidly induced by abscisic acid | Q36821384 |
| | Disease resistance or growth: the role of plant hormones in balancing immune responses and fitness costs | Q36871832 |
| | The role of WRKY transcription factors in plant immunity | Q37472672 |
| | NLR sensors meet at the SGT1-HSP90 crossroad | Q37680184 |
| | Role of AGC kinases in plant growth and stress responses | Q38030851 |
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| | Plant bZIP transcription factors responsive to pathogens: a review. | Q38098005 |
| | agriGO: a GO analysis toolkit for the agricultural community | Q38373934 |
| | Development of molecular markers linked to disease resistance genes in common bean based on whole genome sequence | Q38632992 |
| | Transcriptome and Small RNAome Dynamics during a Resistant and Susceptible Interaction between Cucumber and Downy Mildew. | Q38789339 |
| | Genetic analysis of the response to eleven Colletotrichum lindemuthianum races in a RIL population of common bean (Phaseolus vulgaris L.). | Q39614904 |
| | Differential expression of four soybean bZIP genes during Phakopsora pachyrhizi infection. | Q41201722 |
| | Simultaneous transcriptome analysis of Colletotrichum gloeosporioides and tomato fruit pathosystem reveals novel fungal pathogenicity and fruit defense strategies | Q41673156 |
| | RF2a, a bZIP transcriptional activator of the phloem-specific rice tungro bacilliform virus promoter, functions in vascular development | Q42009239 |
| | Genomes and transcriptomes of partners in plant-fungal-interactions between canola (Brassica napus) and two Leptosphaeria species | Q42080229 |
| | Uncovering the genetic architecture of Colletotrichum lindemuthianum resistance through QTL mapping and epistatic interaction analysis in common bean | Q42198083 |
| | Adi3 is a Pdk1-interacting AGC kinase that negatively regulates plant cell death | Q42277432 |
| | Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense | Q42441346 |
| | The Co-4 locus on chromosome Pv08 contains a unique cluster of 18 COK-4 genes and is regulated by immune response in common bean | Q42474648 |
| | AGC kinase OsOxi1 positively regulates basal resistance through suppression of OsPti1a-mediated negative regulation | Q42476209 |
| | Low Oleic Acid-Derived Repression of Jasmonic Acid-Inducible Defense Responses Requires the WRKY50 and WRKY51 Proteins | Q42479054 |
| | The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. | Q42504345 |
| | A GAL4-like protein is involved in the switch between biotrophic and necrotrophic phases of the infection process of Colletotrichum lindemuthianum on common bean. . | Q42634727 |
| | A reference genome for common bean and genome-wide analysis of dual domestications | Q42664823 |
| | The tomato Mi-1 gene confers resistance to both root-knot nematodes and potato aphids | Q42688169 |
| | Melanin is not required for turgor generation but enhances cell-wall rigidity in appressoria of the corn pathogen Colletotrichum graminicola | Q42774359 |
| | Virulence and Molecular Diversity in Colletotrichum lindemuthianum from South, Central, and North America | Q43624179 |
| | The promoter of the nematode resistance gene Hs1pro-1 activates a nematode-responsive and feeding site-specific gene expression in sugar beet (Beta vulgaris L.) and Arabidopsis thaliana | Q44574001 |
| | RNAseq-based transcriptome analysis of Lactuca sativa infected by the fungal necrotroph Botrytis cinerea | Q45339691 |
| | Differential protein expression in Colletotrichum acutatum: changes associated with reactive oxygen species and nitrogen starvation implicated in pathogenicity on strawberry | Q46427625 |
| | Repression of shoot growth, a bZIP transcriptional activator, regulates cell elongation by controlling the level of gibberellins | Q47853029 |
| | Beginning to understand the role of sugar carriers in Colletotrichum lindemuthianum: the function of the gene mfs1. | Q48040596 |
| | Positional cloning of a gene for nematode resistance in sugar beet | Q48054013 |
| | The wheat transcriptional activator SPA: a seed-specific bZIP protein that recognizes the GCN4-like motif in the bifactorial endosperm box of prolamin genes. | Q48054354 |
| | The developmentally regulated bZIP factor ROM1 modulates transcription from lectin and storage protein genes in bean embryos | Q48062654 |
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | DESeq2 | Q113018293 |
| P433 | issue | 11 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Phaseolus vulgaris | Q42339 |
| | transcriptome | Q252857 |
| | Colletotrichum lindemuthianum | Q2853020 |
| P304 | page(s) | e0165823 | |
| P577 | publication date | 2016-11-09 | |
| P1433 | published in | PLOS One | Q564954 |
| P1476 | title | Transcriptome Profiling of the Phaseolus vulgaris - Colletotrichum lindemuthianum Pathosystem | |
| P478 | volume | 11 | |