Knowledge-based analysis of functional impacts of mutations in microRNA seed regions.

scientific article published on October 2015

Knowledge-based analysis of functional impacts of mutations in microRNA seed regions. is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1015365224
P356DOI10.1007/S12038-015-9560-2
P698PubMed publication ID26564979
P5875ResearchGate publication ID283943935

P50authorYan CuiQ57325600
P2093author name stringAnindya Bhattacharya
P2860cites workdbSNP: the NCBI database of genetic variationQ24608672
PolymiRTS Database: linking polymorphisms in microRNA target sites with complex traitsQ24675631
MicroRNA targets in DrosophilaQ24806738
Common features of microRNA target prediction toolsQ27002723
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targetsQ27860792
MicroRNAs: genomics, biogenesis, mechanism, and functionQ27861070
Posttranscriptional regulation of microRNA biogenesis in animalsQ28282519
miRBase: annotating high confidence microRNAs using deep sequencing dataQ28660701
The UCSC Table Browser data retrieval toolQ29614432
Progressive hearing loss and gradual deterioration of sensory hair bundles in the ears of mice lacking the actin-binding protein Eps8L2.Q30543591
The deep evolution of metazoan microRNAsQ33405970
A single-base substitution in the seed region of miR-184 causes EDICT syndromeQ34087435
Mutations in the seed region of human miR-96 are responsible for nonsyndromic progressive hearing loss.Q34975356
g:Profiler--a web server for functional interpretation of gene lists (2011 update).Q35075627
Functional and evolutionary significance of human microRNA seed region mutationsQ35514457
PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traitsQ35631187
SomamiR: a database for somatic mutations impacting microRNA function in cancer.Q36491386
RamiGO: an R/Bioconductor package providing an AmiGO visualize interfaceQ36638518
g:Profiler--a web-based toolset for functional profiling of gene lists from large-scale experimentsQ38302104
GOSemSim: an R package for measuring semantic similarity among GO terms and gene productsQ38375582
A new method to measure the semantic similarity of GO termsQ38398724
PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological pathwaysQ38493900
Progressive hearing loss in mice carrying a mutation in the p75 gene.Q42492580
Genome-wide in silico screening for microRNA genetic variability in livestock speciesQ87113197
P433issue4
P304page(s)791-798
P577publication date2015-10-01
P1433published inJournal of BiosciencesQ2092222
P1476titleKnowledge-based analysis of functional impacts of mutations in microRNA seed regions
P478volume40

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cites work (P2860)
Q57284007Framework for microRNA variant annotation and prioritization using human population and disease datasets
Q38754660MicroRNAs: effective elements in ear-related diseases and hearing loss
Q40310625SomamiR 2.0: a database of cancer somatic mutations altering microRNA-ceRNA interactions.
Q47139126The Mechanism of Synchronous Precise Regulation of Two Shrimp White Spot Syndrome Virus Targets by a Viral MicroRNA.

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