| scholarly article | Q13442814 |
| P356 | DOI | 10.1016/J.YMPEV.2017.07.009 |
| P698 | PubMed publication ID | 28716741 |
| P50 | author | Bayram Göçmen | Q12808766 |
| Miguel Vences | Q96032 | ||
| Sebastian Steinfartz | Q15434764 | ||
| Leon Blaustein | Q21395654 | ||
| Irisarri, Iker | Q54638668 | ||
| Denis Baurain | Q56376511 | ||
| Kathryn R Elmer | Q57901696 | ||
| Barbara K Mable | Q57910273 | ||
| James D Burgon | Q88540271 | ||
| Arne W Nolte | Q90297779 | ||
| Michael Veith | Q93186338 | ||
| Sven Künzel | Q114777421 | ||
| Ariel Rodríguez | Q22106768 | ||
| Hervé Philippe | Q28334656 | ||
| Mariana Lúcio Lyra | Q42302360 | ||
| P2860 | cites work | Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species | Q21090909 |
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| Phylogenomics resolves the timing and pattern of insect evolution | Q29038108 | ||
| PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses | Q29546512 | ||
| An improved general amino acid replacement matrix | Q29547248 | ||
| Trimmomatic: a flexible trimmer for Illumina sequence data | Q29547278 | ||
| Search and clustering orders of magnitude faster than BLAST | Q29547431 | ||
| Bayesian inference of species trees from multilocus data | Q29547649 | ||
| Gene tree discordance, phylogenetic inference and the multispecies coalescent | Q29614318 | ||
| De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis | Q29615950 | ||
| Inferring phylogenies from RAD sequence data | Q30000854 | ||
| Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences | Q30835203 | ||
| Inconsistency of phylogenetic estimates from concatenated data under coalescence | Q31105795 | ||
| Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae). | Q31146473 | ||
| SCaFoS: a tool for selection, concatenation and fusion of sequences for phylogenomics | Q33272845 | ||
| PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas | Q33314681 | ||
| Coalescent methods for estimating phylogenetic trees | Q33462194 | ||
| Resolving postglacial phylogeography using high-throughput sequencing. | Q34136350 | ||
| Anchored hybrid enrichment for massively high-throughput phylogenomics | Q34273260 | ||
| A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing | Q34497199 | ||
| RAD sequencing enables unprecedented phylogenetic resolution and objective species delimitation in recalcitrant divergent taxa. | Q34518965 | ||
| A molecular assessment of phylogenetic relationships and lineage accumulation rates within the family Salamandridae (Amphibia, Caudata). | Q34543696 | ||
| Nuclear and mitochondrial multilocus phylogeny and survey of alkaloid content in true salamanders of the genus Salamandra (Salamandridae). | Q34658818 | ||
| Phylogeny and biogeography of the family Salamandridae (Amphibia: Caudata) inferred from complete mitochondrial genomes | Q34830757 | ||
| Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates | Q35047548 | ||
| PyRAD: assembly of de novo RADseq loci for phylogenetic analyses | Q35113428 | ||
| Biogeographic analysis reveals ancient continental vicariance and recent oceanic dispersal in amphibians. | Q35192537 | ||
| Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms. | Q35586748 | ||
| Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards | Q35604185 | ||
| Mitogenome assembly from genomic multiplex libraries: comparison of strategies and novel mitogenomes for five species of frogs. | Q35852843 | ||
| Next-generation biology: Sequencing and data analysis approaches for non-model organisms | Q36019215 | ||
| Methodological congruence in phylogenomic analyses with morphological support for teiid lizards (Sauria: Teiidae). | Q36072198 | ||
| Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis. | Q36126712 | ||
| ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes | Q36614037 | ||
| Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization | Q36781111 | ||
| Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies | Q37025084 | ||
| tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes | Q37182153 | ||
| The gene tree delusion | Q38978053 | ||
| Molecular phylogenetics and historical biogeography among salamandrids of the "true" salamander clade: rapid branching of numerous highly divergent lineages in Mertensiella luschani associated with the rise of Anatolia | Q39585492 | ||
| The Identification of the Closest Living Relative(s) of Tetrapods: Phylogenomic Lessons for Resolving Short Ancient Internodes | Q39593552 | ||
| Stacks: an analysis tool set for population genomics | Q41982872 | ||
| RADSeq: next-generation population genetics | Q42720622 | ||
| MITOS: improved de novo metazoan mitochondrial genome annotation | Q43905968 | ||
| Phylogenetic analysis at deep timescales: unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum | Q44161169 | ||
| The accuracy of species tree estimation under simulation: a comparison of methods | Q46202339 | ||
| Selecting Question-Specific Genes to Reduce Incongruence in Phylogenomics: A Case Study of Jawed Vertebrate Backbone Phylogeny | Q46214761 | ||
| Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting | Q46846521 | ||
| Application of RAD-based phylogenetics to complex relationships among variously related taxa in a species flock | Q46854481 | ||
| The more the better - polyandry and genetic similarity are positively linked to reproductive success in a natural population of terrestrial salamanders (Salamandra salamandra). | Q46977481 | ||
| A Bayesian approach on molecules and behavior: reconsidering phylogenetic and evolutionary patterns of the Salamandridae with emphasis on Triturus newts | Q47186567 | ||
| Heterochrony, cannibalism, and the evolution of viviparity in Salamandra salamandra | Q47844690 | ||
| Phylotranscriptomic consolidation of the jawed vertebrate timetree. | Q54354777 | ||
| P921 | main subject | phylogenomics | Q3381973 |
| phylogenetics | Q171184 | ||
| P1104 | number of pages | 11 | |
| P304 | page(s) | 16-26 | |
| P577 | publication date | 2017-07-14 | |
| P1433 | published in | Molecular Phylogenetics and Evolution | Q4248868 |
| P1476 | title | Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches | |
| P478 | volume | 115 |
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| Q70103213 | Call a spade a spade: taxonomy and distribution of Pelobates, with description of a new Balkan endemic |
| Q107009243 | Climatic refugia boosted allopatric diversification in Western Mediterranean vipers |
| Q64025146 | Common lizards break Dollo’s law of irreversibility: Genome-wide phylogenomics support a single origin of viviparity and re-evolution of oviparity |
| Q64106704 | Geographic separation and genetic differentiation of populations are not coupled with niche differentiation in threatened Kaiser's spotted newt (Neurergus kaiseri) |
| Q110697296 | Independent evolutionary transitions to pueriparity across multiple timescales in the viviparous genus Salamandra |
| Q96762027 | Larger, unfiltered datasets are more effective at resolving phylogenetic conflict: Introns, exons, and UCEs resolve ambiguities in Golden-backed frogs (Anura: Ranidae; genus Hylarana) |
| Q110697308 | Next-generation phylogeography of the banded newts (Ommatotriton): A phylogenetic hypothesis for three ancient species with geographically restricted interspecific gene flow and deep intraspecific genetic structure |
| Q91120943 | Phylogeny and species delimitation of near Eastern Neurergus newts (Salamandridae) based on genome-wide RADseq data analysis |
| Q90689625 | The changing views on the evolutionary relationships of extant Salamandridae (Amphibia: Urodela) |
| Q114765281 | Ventral and lateral spot patterns differentiation between three smooth newt species (Amphibia: Salamandridae: Lissotriton) |
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