Characterization of histone-related chemical modifications in formalin-fixed paraffin-embedded and fresh-frozen human pancreatic cancer xenografts using LC-MS/MS.

scientific article published on 12 December 2016

Characterization of histone-related chemical modifications in formalin-fixed paraffin-embedded and fresh-frozen human pancreatic cancer xenografts using LC-MS/MS. is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1036049852
P356DOI10.1038/LABINVEST.2016.134
P698PubMed publication ID27941757

P50authorGyörgy Marko-VargaQ66147172
P2093author name stringDaniel Ansari
Roland Andersson
Monika Bauden
Theresa Kristl
P2860cites workImplication of epigenetics in pancreas development and diseaseQ38676917
Formaldehyde fixationQ39825113
Acetylation of histones in neocortex and hippocampus of rats exposed to different modes of hypobaric hypoxia: Implications for brain hypoxic injury and tolerance.Q40236744
Tumor hypoxia correlates with metastatic tumor growth of pancreatic cancer in an orthotopic murine modelQ40539159
A dual role of linker histone H1.4 Lys 34 acetylation in transcriptional activationQ42136897
Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteomeQ43256762
Identification of formaldehyde-induced modifications in proteins: reactions with model peptidesQ44669066
Altered primary chromatin structures and their implications in cancer development.Q52878923
The Action of Formaldehyde on Amines and Amino Acids1Q61012839
Identification of formaldehyde-induced modifications in proteins: reactions with insulinQ83354869
H4K12 and H3K18 Acetylation Associates With Poor Prognosis in Pancreatic CancerQ85360599
Translating the Histone CodeQ22065840
Regulation of chromatin by histone modificationsQ24635070
H1 histones: current perspectives and challengesQ27023358
Chemical derivatization of histones for facilitated analysis by mass spectrometry.Q30370270
Quantitative proteomic analysis of histone modificationsQ30375585
A molecular mechanism of formalin fixation and antigen retrievalQ31050594
Unravelling the proteome of formalin-fixed paraffin-embedded tissueQ33246711
Heat-induced antigen retrieval: mechanisms and application to histochemistryQ33267965
Cellular histone modification patterns predict prognosis and treatment response in resectable pancreatic adenocarcinoma: results from RTOG 9704.Q33711106
Determinants of nucleosome organization in primary human cellsQ34027018
Accessing microenvironment compartments in formalin-fixed paraffin-embedded tissues by protein expression analysisQ35030311
Circulating tumor-derived DNA is shorter than somatic DNA in plasma.Q35212453
Proteomic developments in the analysis of formalin-fixed tissueQ35332357
Unrestricted modification search reveals lysine methylation as major modification induced by tissue formalin fixation and paraffin embedding.Q35590688
Release and activity of histone in diseasesQ35679542
Pathology Tissue-quantitative Mass Spectrometry Analysis to Profile Histone Post-translational Modification Patterns in Patient SamplesQ35805423
Circulating nucleosomes as epigenetic biomarkers in pancreatic cancerQ36135041
Toward deciphering proteomes of formalin-fixed paraffin-embedded (FFPE) tissues.Q36580016
Proteomic characterization of novel histone post-translational modificationsQ37079424
A novel, enigmatic histone modification: biotinylation of histones by holocarboxylase synthetaseQ37329414
Efficient extraction of proteins from formalin-fixed paraffin-embedded tissues requires higher concentration of tris(hydroxymethyl)aminomethane.Q37581305
Histone onco-modificationsQ37868421
The contribution of mass spectrometry-based proteomics to understanding epigeneticsQ38647501
P4510describes a project that usesliquid chromatography–mass spectrometryQ873864
liquid chromatography-tandem mass spectrometryQ117788892
P433issue3
P921main subjectpancreatic cancerQ212961
xenograftQ64148587
P304page(s)279-288
P577publication date2016-12-12
P1433published inLaboratory InvestigationQ6467260
P1476titleCharacterization of histone-related chemical modifications in formalin-fixed paraffin-embedded and fresh-frozen human pancreatic cancer xenografts using LC-MS/MS.
P478volume97

Reverse relations

cites work (P2860)
Q90668047Enrichment of histones from patient samples for mass spectrometry-based analysis of post-translational modifications
Q47119059Histone profiling reveals the H1.3 histone variant as a prognostic biomarker for pancreatic ductal adenocarcinoma
Q100737058Large scale, robust, and accurate whole transcriptome profiling from clinical formalin-fixed paraffin-embedded samples
Q92210288Omics Approaches in Pancreatic Adenocarcinoma
Q93081040Quantitative proteomics identifies brain acid soluble protein 1 (BASP1) as a prognostic biomarker candidate in pancreatic cancer tissue

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