Sniper: improved SNP discovery by multiply mapping deep sequenced reads

scientific article published on 20 June 2011

Sniper: improved SNP discovery by multiply mapping deep sequenced reads is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1018738511
P356DOI10.1186/GB-2011-12-6-R55
P932PMC publication ID3218843
P698PubMed publication ID21689413
P5875ResearchGate publication ID51234769

P2093author name stringJunhyong Kim
Daniel F Simola
P2860cites workUltrafast and memory-efficient alignment of short DNA sequences to the human genomeQ21183894
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Domain size distributions can predict domain boundariesQ28141623
Thousands of human mobile element fragments undergo strong purifying selection near developmental genesQ28757667
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Alu repeats and human diseaseQ29618262
Alu repeats and human genomic diversityQ29618341
A probabilistic approach for SNP discovery in high-throughput human resequencing dataQ33482754
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High quality SNP calling using Illumina data at shallow coverage.Q33535175
SNP detection and genotyping from low-coverage sequencing data on multiple diploid samplesQ33730094
SNP detection for massively parallel whole-genome resequencingQ34017409
The uniqueome: a mappability resource for short-tag sequencingQ34480065
Quality scores and SNP detection in sequencing-by-synthesis systemsQ36586616
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Evaluation of next generation sequencing platforms for population targeted sequencing studiesQ37213808
Survey of human and rat microsatellites.Q48178876
P433issue6
P304page(s)R55
P577publication date2011-06-20
P1433published inGenome BiologyQ5533480
P1476titleSniper: improved SNP discovery by multiply mapping deep sequenced reads
P478volume12

Reverse relations

cites work (P2860)
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Q34211322ARYANA: Aligning Reads by Yet Another Approach
Q38600211Achieving crop stress tolerance and improvement--an overview of genomic techniques
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Q30820238Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus
Q100533737Exploration into biomarker potential of region-specific brain gene co-expression networks
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Q51036016SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.
Q41695154STEAK: A specific tool for transposable elements and retrovirus detection in high-throughput sequencing data
Q35007819The repetitive component of the sunflower genome as shown by different procedures for assembling next generation sequencing reads
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