Impact of Cropping Systems, Soil Inoculum, and Plant Species Identity on Soil Bacterial Community Structure

scientific article published on 27 September 2016

Impact of Cropping Systems, Soil Inoculum, and Plant Species Identity on Soil Bacterial Community Structure is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/S00248-016-0861-2
P698PubMed publication ID27677892

P50authorSuzanne L IshaqQ57021205
Erik A. LehnhoffQ108744419
P2093author name stringCarl J Yeoman
Stephen P Johnson
Fabian D Menalled
Sarah Olivo
Zach J Miller
P2860cites workProfiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNAQ24569526
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communitiesQ24647611
The photorespiratory glycolate metabolism is essential for cyanobacteria and might have been conveyed endosymbiontically to plantsQ28298924
Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genusQ28648133
UniFrac: a new phylogenetic method for comparing microbial communitiesQ29547435
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomyQ29547619
UCHIME improves sensitivity and speed of chimera detectionQ29547664
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sampleQ29614456
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequencesQ29615050
Arthrobacter chlorophenolicus sp. nov., a new species capable of degrading high concentrations of 4-chlorophenolQ30625475
Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.Q30651139
Plant diversity drives soil microbial biomass carbon in grasslands irrespective of global environmental change factorsQ30977165
Direct comparisons of Illumina vs. Roche 454 sequencing technologies on the same microbial community DNA sampleQ31048918
Selective progressive response of soil microbial community to wild oat rootsQ33384110
Ironing out the wrinkles in the rare biosphere through improved OTU clusteringQ33541671
Soil biota community structure and abundance under agricultural intensification and extensificationQ33555530
Agricultural intensification and ecosystem propertiesQ33641853
The quest for a unified view of bacterial land colonizationQ33801680
Soil microbes drive the classic plant diversity-productivity patternQ33913897
Belowground biodiversity effects of plant symbionts support aboveground productivityQ33971947
PANDAseq: paired-end assembler for illumina sequencesQ34158516
The under-recognized dominance of Verrucomicrobia in soil bacterial communitiesQ34248981
Microbial population and community dynamics on plant roots and their feedbacks on plant communitiesQ34314787
Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United StatesQ35030117
STAMP: statistical analysis of taxonomic and functional profiles.Q35212955
Distinct soil microbial diversity under long-term organic and conventional farmingQ35371210
Farm management, not soil microbial diversity, controls nutrient loss from smallholder tropical agricultureQ35409396
Belowground biodiversity and ecosystem functioningQ35453672
Crop rotational diversity enhances belowground communities and functions in an agroecosystemQ35642225
Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive SeasonsQ35737806
Using Sex to Cure the GenomeQ35961270
The mycorrhiza helper bacteria revisitedQ36930993
Phenolic acids act as signaling molecules in plant-microbe symbiosesQ37733222
Integrity of bacterial genomic DNA after autoclaving: possible implications for horizontal gene transfer and clinical waste managementQ39482416
Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.Q39489110
Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop developmentQ39493665
Unravelling the cross-talk between iron starvation and oxidative stress responses highlights the key role of PerR (alr0957) in peroxide signalling in the cyanobacterium Nostoc PCC 7120.Q41487764
Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.).Q41822412
High-pressure-mediated survival of Clostridium botulinum and Bacillus amyloliquefaciens endospores at high temperature.Q42106275
Inhibitory and toxic effects of extracellular self-DNA in litter: a mechanism for negative plant-soil feedbacks?Q46820309
PLANT DIVERSITY, SOIL MICROBIAL COMMUNITIES, AND ECOSYSTEM FUNCTION: ARE THERE ANY LINKS?Q47460554
Agricultural Intensification and Ecosystem PropertiesQ55894313
Soil biodiversity for agricultural sustainabilityQ56038573
Breaking New Ground: Soil Communities and Exotic Plant InvasionQ56619064
An examination of the biodiversity–ecosystem function relationship in arable soil microbial communitiesQ57234799
Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivityQ59059673
Azospirillum strains use phenolic compounds as intermediates for electron transfer under oxygen-limiting conditionsQ86639360
Response of microbial populations to environmental disturbanceQ86652441
Allelopathic potential of wild oat (Avena fatua) on spring wheat (Triticum aestivum) growthQ87064786
Bray-Curtis Ordination: An Effective Strategy for Analysis of Multivariate Ecological DataQ104207846
P433issue2
P921main subjectsoil bacterial communityQ121267935
bacterial communityQ129982151
P304page(s)417-434
P577publication date2016-09-27
P1433published inMicrobial EcologyQ15766091
P1476titleImpact of Cropping Systems, Soil Inoculum, and Plant Species Identity on Soil Bacterial Community Structure
P478volume73

Reverse relations

cites work (P2860)
Q93027363A Review of Characterization Approaches for Smallholder Farmers: Towards Predictive Farm Typologies
Q42654177An Investigation into Rumen Fungal and Protozoal Diversity in Three Rumen Fractions, during High-Fiber or Grain-Induced Sub-Acute Ruminal Acidosis Conditions, with or without Active Dry Yeast Supplementation
Q97568197Dryland Cropping Systems, Weed Communities, and Disease Status Modulate the Effect of Climate Conditions on Wheat Soil Bacterial Communities
Q46267748Ground Juniperus pinchotii and urea in supplements fed to Rambouillet ewe lambs Part 2: Ewe lamb rumen microbial communities
Q58228237Impact of chlorine dioxide disinfection of irrigation water on the epiphytic bacterial community of baby spinach and underlying soil
Q92541206Pelleted-hay alfalfa feed increases sheep wether weight gain and rumen bacterial richness over loose-hay alfalfa feed
Q91787750Plant-microbial interactions in agriculture and the use of farming systems to improve diversity and productivity
Q44370440Previous crop and rotation history effects on maize seedling health and associated rhizosphere microbiome
Q59941705Zinc AA supplementation alters yearling ram rumen bacterial communities but zinc sulfate supplementation does not1

Search more.