PROMALS3D web server for accurate multiple protein sequence and structure alignments

scientific article published on 24 May 2008

PROMALS3D web server for accurate multiple protein sequence and structure alignments is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/nar/PeiTG08
P356DOI10.1093/NAR/GKN322
P932PMC publication ID2447800
P698PubMed publication ID18503087
P5875ResearchGate publication ID5347383

P50authorNick GrishinQ21339744
P2093author name stringJimin Pei
Ming Tang
P2860cites workMUMMALS: multiple sequence alignment improved by using hidden Markov models with local structural informationQ33255503
DbClustal: rapid and reliable global multiple alignments of protein sequences detected by database searchesQ33617066
3DCoffee: combining protein sequences and structures within multiple sequence alignmentsQ47333724
SPEM: improving multiple sequence alignment with sequence profiles and predicted secondary structuresQ48481700
SABmark--a benchmark for sequence alignment that covers the entire known fold spaceQ80500501
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
TM-align: a protein structure alignment algorithm based on the TM-scoreQ24522708
The Universal Protein Resource (UniProt): an expanding universe of protein informationQ24538737
A comprehensive comparison of multiple sequence alignment programsQ24548825
MAFFT version 5: improvement in accuracy of multiple sequence alignmentQ24556683
ProbCons: Probabilistic consistency-based multiple sequence alignmentQ24557418
Amino acid substitution matrices from protein blocksQ24563220
The Pfam protein families databaseQ24599089
A tool for multiple sequence alignmentQ24612016
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure informationQ24812359
Protein secondary structure prediction based on position-specific scoring matricesQ27860483
SCOP: a structural classification of proteins database for the investigation of sequences and structuresQ27860689
T-Coffee: A novel method for fast and accurate multiple sequence alignmentQ27860999
Mapping the protein universeQ27861112
PROMALS3D: a tool for multiple protein sequence and structure alignmentsQ29615726
AL2CO: calculation of positional conservation in a protein sequence alignment.Q30328587
The ASTRAL Compendium in 2004Q30336507
FAST: a novel protein structure alignment algorithm.Q30349855
PROMALS: towards accurate multiple sequence alignments of distantly related proteins.Q30359563
P433issueWeb Server issue
P407language of work or nameEnglishQ1860
P921main subjectweb serverQ11288
protein structureQ735188
sequence alignmentQ827246
P304page(s)W30-4
P577publication date2008-05-24
P1433published inNucleic Acids ResearchQ135122
P1476titlePROMALS3D web server for accurate multiple protein sequence and structure alignments
P478volume36

Reverse relations

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