Very short patch repair of T:G mismatches in vivo: importance of context and accessory proteins

scientific article

Very short patch repair of T:G mismatches in vivo: importance of context and accessory proteins is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.177.3.660-666.1995
P932PMC publication ID176641
P698PubMed publication ID7836300

P2093author name stringM Lieb
S Rehmat
P2860cites workAnalysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutesQ54060980
A DNA repair process in Escherichia coli corrects U:G and T:G mismatches to C:G at sites of cytosine methylation.Q54635965
Isolation and characterization of the Escherichia coli mutL gene product.Q54734906
Mismatch repair and recombination in E. coli.Q54762491
Mismatch repair of deaminated 5-methyl-cytosine.Q54766647
DNA sequences required to induce localized conversion in Streptococcus pneumoniae transformationQ58197696
The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonucleaseQ59087847
Mapping missense and nonsense mutation in gene cI of bacteriophage lambda: marker effectsQ67499055
Location of DNA methylation genes on the Escherichia coli K-12 genetic mapQ69313428
Conservation of Chi cutting activity in terrestrial and marine enteric bacteriaQ69666883
Recombination in the lambda repressor gene: evidence that very short patch (VSP) mismatch correction restores a specific sequenceQ70098082
Specific mismatch correction in bacteriophage lambda crosses by very short patch repairQ72793019
Some mismatch repair activities in Escherichia coliQ24642459
Repetitive extragenic palindromic sequences: a major component of the bacterial genomeQ28267206
Escherichia coli mutS-encoded protein binds to mismatched DNA base pairsQ28287503
DNA gyrase binds to the family of prokaryotic repetitive extragenic palindromic sequencesQ33676488
Escherichia coli mutY gene product is required for specific A-G----C.G mismatch correctionQ33680797
Pedigrees of some mutant strains of Escherichia coli K-12Q33851231
Very short patch mismatch repair in phage lambda: repair sites and length of repair tracts.Q33952578
Repair of a mismatch is influenced by the base composition of the surrounding nucleotide sequenceQ33952892
Spontaneous mutation at a 5-methylcytosine hotspot is prevented by very short patch (VSP) mismatch repairQ33957852
Molecular basis of base substitution hotspots in Escherichia coliQ34183770
DNA Sequence and Analysis of 136 Kilobases of the Escherichia coli Genome: Organizational Symmetry around the Origin of ReplicationQ34306353
DNA mismatch correction by Very Short Patch repair may have altered the abundance of oligonucleotides in the E. coli genomeQ35066166
Systematic sequencing of theEscherichia coligenome: analysis of the 0 – 2.4 min regionQ35072782
Physical mapping of repetitive extragenic palindromic sequences in Escherichia coli and phylogenetic distribution among Escherichia coli strains and other enteric bacteriaQ36114018
A gene required for very short patch repair in Escherichia coli is adjacent to the DNA cytosine methylase geneQ36254421
Bacterial genes mutL, mutS, and dcm participate in repair of mismatches at 5-methylcytosine sitesQ36272166
Deoxyribonucleic acid-cytosine methylation by host- and plasmid-controlled enzymesQ36604638
Over- and under-representation of short oligonucleotides in DNA sequencesQ36835268
Mechanisms and biological effects of mismatch repairQ37041860
Homologous recombination in procaryotes.Q37054728
Hyperrecombination at a specific DNA sequence in pneumococcal transformationQ37563787
Special sites in generalized recombinationQ39854468
Statistical evaluation and biological interpretation of non-random abundance in the E. coli K-12 genome of tetra- and pentanucleotide sequences related to VSP DNA mismatch repairQ40421606
Characterization of DNA adenine methylation mutants of Escherichia coli K12Q41039288
DNA mismatch-repair in Escherichia coli counteracting the hydrolytic deamination of 5-methyl-cytosine residuesQ41342744
Heteroduplex DNA formation is associated with replication and recombination in poxvirus-infected cellsQ41833539
Genetic studies of the lac repressor. III. Additional correlation of mutational sites with specific amino acid residuesQ42028460
Some features of base pair mismatch and heterology repair in Escherichia coliQ42083526
Repair of single base-pair transversion mismatches of Escherichia coli in vitro: correction of certain A/G mismatches is independent of dam methylation and host mutHLS gene functionsQ42960484
Marker-dependent recombination in T4 bacteriophage. III. Structural prerequisites for marker discriminationQ42962420
Genetic requirements for hyper-recombination by very short patch mismatch repair: involvement of Escherichia coli DNA polymerase I.Q44658321
Recombinational hotspot activity of chi-like sequencesQ44665383
Significant dispersed recurrent DNA sequences in the Escherichia coli genome. Several new groups.Q52400704
P433issue3
P304page(s)660-666
P577publication date1995-02-01
P1433published inJournal of BacteriologyQ478419
P1476titleVery short patch repair of T:G mismatches in vivo: importance of context and accessory proteins
P478volume177

Reverse relations

cites work (P2860)
Q359666435-Methylcytosine is not a mutation hot spot in nondividing Escherichia coli
Q39741220A DNA methyltransferase can protect the genome from postdisturbance attack by a restriction-modification gene complex.
Q36849562Codon bias in Escherichia coli: the influence of codon context on mutation and selection.
Q34617418Conjugational Hyperrecombination Achieved by Derepressing the LexA Regulon, Altering the Properties of RecA Protein and Inactivating Mismatch Repair in Escherichia coli K-12
Q34133630Cooperation and competition in mismatch repair: very short-patch repair and methyl-directed mismatch repair in Escherichia coli
Q34509028DNA Mismatch Repair
Q39841075Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cells
Q33555210Interaction of MutS and Vsr: some dominant-negative mutS mutations that disable methyladenine-directed mismatch repair are active in very-short-patch repair
Q33750656Mismatch repair in Escherichia coli enhances instability of (CTG)n triplet repeats from human hereditary diseases
Q35190848Mismatch repair protein MutL becomes limiting during stationary-phase mutation
Q24605441Mismatch repair proteins collaborate with methyltransferases in the repair of O(6)-methylguanine
Q35633546Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.
Q34045547Neisseria gonorrhoeae FA1090 carries genes encoding two classes of Vsr endonucleases
Q35609925Overexpression of vsr in Escherichia coli is mutagenic
Q37127818Properties of HflX, an enigmatic protein from Escherichia coli.
Q36294768Reconstitution of the very short patch repair pathway from Escherichia coli
Q34934889Repair of deaminated bases in DNA.
Q39744405Repair of hydrolytic DNA deamination damage in thermophilic bacteria: cloning and characterization of a Vsr endonuclease homolog from Bacillus stearothermophilus
Q34657088The Escherichia coli MutL protein stimulates binding of Vsr and MutS to heteroduplex DNA.
Q33941852The structural basis of damaged DNA recognition and endonucleolytic cleavage for very short patch repair endonuclease
Q35614147Transcription of the mutL repair, miaA tRNA modification, hfq pleiotropic regulator, and hflA region protease genes of Escherichia coli K-12 from clustered Esigma32-specific promoters during heat shock
Q34603730Transient and heritable mutators in adaptive evolution in the lab and in nature
Q37776339Wot the ‘L—Does MutL do?

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