Microarray identification of novel genes downstream of Six1, a critical factor in cranial placode, somite, and kidney development

scientific article published on 16 December 2014

Microarray identification of novel genes downstream of Six1, a critical factor in cranial placode, somite, and kidney development is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/DVDY.24229
P932PMC publication ID4428348
P698PubMed publication ID25403746
P5875ResearchGate publication ID268528163

P50authorThomas M. MaynardQ37369807
Andrea StreitQ38803999
Sally A MoodyQ43142574
Ramya RanganathanQ57741877
P2093author name stringBo Yan
Karen M Neilson
P2860cites workCombined Whole-Mount in Situ Hybridization and Immunohistochemistry in Avian EmbryosQ59971442
Molecular cloning and embryonic expression of Xenopus Six homeobox genesQ73568844
Thymus, kidney and craniofacial abnormalities in Six 1 deficient miceQ73593261
Branchio-oto-renal syndromeQ75210297
Competence of cranial ectoderm to respond to Fgf signaling suggests a two-step model of otic placode inductionQ82444181
Identification of a novel EYA1 mutation presenting in a newborn with laryngomalacia, glossoptosis, retrognathia, and pectus excavatumQ83324749
How old genes make a new head: redeployment of Six and Eya genes during the evolution of vertebrate cranial placodesQ84359707
SIX1 mutations cause branchio-oto-renal syndrome by disruption of EYA1-SIX1-DNA complexesQ24292967
Biochemical and functional characterization of six SIX1 Branchio-oto-renal syndrome mutationsQ24317065
A human homologue of the Drosophila eyes absent gene underlies branchio-oto-renal (BOR) syndrome and identifies a novel gene familyQ24318377
Structure, function and expression of a murine homeobox protein AREC3, a homologue of Drosophila sine oculis gene product, and implication in developmentQ24545877
Cooperation of six and eya in activation of their target genes through nuclear translocation of EyaQ24554423
The Six1 homeoprotein stimulates tumorigenesis by reactivation of cyclin A1Q24564859
Abrogation of the G2 cell cycle checkpoint associated with overexpression of HSIX1: a possible mechanism of breast carcinogenesisQ24644884
The origin and evolution of the ectodermal placodesQ27012962
Identification of early requirements for preplacodal ectoderm and sensory organ developmentQ27345912
Structure-function analyses of the human SIX1–EYA2 complex reveal insights into metastasis and BOR syndromeQ27676610
Primer3 on the WWW for general users and for biologist programmersQ27861030
Branchio-oto-renal syndrome: identification of novel mutations, molecular characterization, mutation distribution, and prospects for genetic testingQ28143175
The role of Six1 in mammalian auditory system developmentQ28188638
Impaired interactions between mouse Eyal harboring mutations found in patients with branchio-oto-renal syndrome and Six, Dach, and G proteinsQ28214522
Six and Eya expression during human somitogenesis and MyoD gene family activationQ28219080
SIX1 mutation associated with enlargement of the vestibular aqueduct in a patient with branchio-oto syndromeQ28237702
Catweasel mice: a novel role for Six1 in sensory patch development and a model for branchio-oto-renal syndromeQ28506861
Eya1 and Six1 are essential for early steps of sensory neurogenesis in mammalian cranial placodesQ28508554
Six1 is required for the early organogenesis of mammalian kidneyQ28510085
Initiation of olfactory placode development and neurogenesis is blocked in mice lacking both Six1 and Six4Q28585270
Patterning of the third pharyngeal pouch into thymus/parathyroid by Six and Eya1Q28586633
Six1 controls patterning of the mouse otic vesicleQ28589213
A Tbx1-Six1/Eya1-Fgf8 genetic pathway controls mammalian cardiovascular and craniofacial morphogenesisQ28589314
Expression of myogenin during embryogenesis is controlled by Six/sine oculis homeoproteins through a conserved MEF3 binding siteQ28589912
Neuropilin 1 and 2 control cranial gangliogenesis and axon guidance through neural crest cellsQ28590138
Six1 and Six4 promote survival of sensory neurons during early trigeminal gangliogenesisQ28592504
Six1 and Six4 homeoproteins are required for Pax3 and Mrf expression during myogenesis in the mouse embryoQ28593548
Balancing cell numbers during organogenesis: Six1a differentially affects neurons and sensory hair cells in the inner ear.Q30425138
Isthmin is a novel secreted protein expressed as part of the Fgf-8 synexpression group in the Xenopus midbrain-hindbrain organizerQ30705224
Xpbx1b and Xmeis1b play a collaborative role in hindbrain and neural crest gene expression in Xenopus embryosQ31048761
Analysis of Spemann organizer formation in Xenopus embryos by cDNA macroarraysQ33202352
Early development of the central and peripheral nervous systems is coordinated by Wnt and BMP signalsQ33320527
Remembrance of things PAS: regulation of development by bHLH-PAS proteinsQ33745070
Six1 is a key regulator of the developmental and evolutionary architecture of sensory neurons in craniatesQ33855467
Xenopus NF-Y pre-sets chromatin to potentiate p300 and acetylation-responsive transcription from the Xenopus hsp70 promoter in vivoQ33889834
Six family genes--structure and function as transcription factors and their roles in developmentQ33957333
Vertebrate GLD2 poly(A) polymerases in the germline and the brainQ34366483
Six1 promotes proliferation of pancreatic cancer cells via upregulation of cyclin D1 expressionQ34634833
Regulation of Drosophila eye development by the transcription factor Sine oculis.Q35107917
Dual transcriptional activities of SIX proteins define their roles in normal and ectopic eye developmentQ35741929
The activity of Pax3 and Zic1 regulates three distinct cell fates at the neural plate borderQ35810702
Early development of the cranial sensory nervous system: from a common field to individual placodesQ35942303
Induction and specification of the vertebrate ectodermal placodes: precursors of the cranial sensory organsQ36100723
Sensory organs: making and breaking the pre-placodal regionQ36431499
The preplacodal region: an ectodermal domain with multipotential progenitors that contribute to sense organs and cranial sensory ganglia.Q36950092
Hindbrain-derived Wnt and Fgf signals cooperate to specify the otic placode in XenopusQ37021446
From shared lineage to distinct functions: the development of the inner ear and epibranchial placodes.Q37749102
Making senses development of vertebrate cranial placodesQ37783809
The peripheral sensory nervous system in the vertebrate head: a gene regulatory perspectiveQ38025839
The aryl hydrocarbon receptor nuclear translocator (ARNT) family of proteins: transcriptional modifiers with multi-functional protein interfacesQ38056974
Human HOX gene disorders.Q38163195
Establishing the pre-placodal region and breaking it into placodes with distinct identitiesQ38191727
Eya1 and Six1 promote neurogenesis in the cranial placodes in a SoxB1-dependent fashionQ38289851
Activation of Six1 target genes is required for sensory placode formationQ39944176
A balance of FGF, BMP and WNT signalling positions the future placode territory in the headQ40398079
Cell lineage analysis in Xenopus embryosQ40882843
Tissue and developmental distribution of Six family gene products.Q41049478
Xema, a foxi-class gene expressed in the gastrula stage Xenopus ectoderm, is required for the suppression of mesendoderm.Q41868105
Xiro, a Xenopus homolog of the Drosophila Iroquois complex genes, controls development at the neural plateQ41976395
Six1 is indispensable for production of functional progenitor cells during olfactory epithelial developmentQ42483671
Six1 is essential for early neurogenesis in the development of olfactory epitheliumQ42519074
Microarray identification of novel downstream targets of FoxD4L1/D5, a critical component of the neural ectodermal transcriptional networkQ42690246
dlx3b/4b are required for the formation of the preplacodal region and otic placode through local modulation of BMP activityQ43138530
foxD5 plays a critical upstream role in regulating neural ectodermal fate and the onset of neural differentiationQ43142498
Zebrafish fgf3 and fgf8 encode redundant functions required for otic placode inductionQ43661877
Retinoic acid perturbs the expression of Xhox.lab genes and alters mesodermal determination in Xenopus laevisQ43719396
Tumorhead, a Xenopus gene product that inhibits neural differentiation through regulation of proliferationQ43730350
Fgf3 and Fgf8 are required together for formation of the otic placode and vesicleQ43963574
Fgf8 and Fgf3 are required for zebrafish ear placode induction, maintenance and inner ear patterningQ44183757
Regulation of Six1 expression by evolutionarily conserved enhancers in tetrapodsQ45098841
SIX1 mutation screening in 247 branchio-oto-renal syndrome families: a recurrent missense mutation associated with BOR.Q45219645
Essential role for PDGF signaling in ophthalmic trigeminal placode induction.Q45931416
The transcription factor six1 inhibits neuronal and promotes hair cell fate in the developing zebrafish (Danio rerio) inner ear.Q46113804
A novel dominant mutation in SIX1, affecting a highly conserved residue, result in only auditory defects in humansQ46350444
The Drosophila sine oculis locus encodes a homeodomain-containing protein required for the development of the entire visual systemQ46456013
Fgf3 and Fgf8 dependent and independent transcription factors are required for otic placode specificationQ47073913
Combinatorial activity of Six1-2-4 genes in cephalic neural crest cells controls craniofacial and brain developmentQ47717338
Xenopus Six1 gene is expressed in neurogenic cranial placodes and maintained in the differentiating lateral linesQ47834355
Six3, a murine homologue of the sine oculis gene, demarcates the most anterior border of the developing neural plate and is expressed during eye development.Q48068853
Molecular cloning and embryonic expression of the Xenopus Arnt geneQ48340804
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectodermQ48668204
Tissues and signals involved in the induction of placodal Six1 expression in Xenopus laevisQ48705949
Semaphorin and neuropilin expression during early morphogenesis of Xenopus laevisQ48846064
Xotx genes in the developing brain of Xenopus laevisQ49019903
Audiovestibular findings in a branchio-oto syndrome patient with a SIX1 mutationQ50435298
Branchio-oto-renal syndrome: detection of EYA1 and SIX1 mutations in five out of six Danish families by combining linkage, MLPA and sequencing analysesQ50456642
Wnt-regulated temporal control of BMP exposure directs the choice between neural plate border and epidermal fate.Q51945248
Lens specification is the ground state of all sensory placodes, from which FGF promotes olfactory identity.Q52005744
An essential role of Xenopus Foxi1a for ventral specification of the cephalic ectoderm during gastrulation.Q52042524
Expression of Xenopus suppressor of cytokine signaling 3 (xSOCS3) is induced by epithelial wounding.Q52049293
Six1 promotes a placodal fate within the lateral neurogenic ectoderm by functioning as both a transcriptional activator and repressor.Q52085976
Genetic determination of nephrogenesis: the Pax/Eya/Six gene network.Q52096291
Developmental changes in nerve growth factor (NGF) binding and NGF receptor proteins trkA and p75 in the facial nerve.Q52215842
Expression of zebrafish six1 during sensory organ development and myogenesis.Q52649463
Conserved expression of mouse Six1 in the pre-placodal region (PPR) and identification of an enhancer for the rostral PPR.Q53323989
P433issue2
P304page(s)181-210
P577publication date2014-12-16
P1433published inDevelopmental DynamicsQ59752
P1476titleMicroarray identification of novel genes downstream of Six1, a critical factor in cranial placode, somite, and kidney development
P478volume244

Reverse relations

cites work (P2860)
Q46523851A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates
Q37684715An optimized method for cryogenic storage of Xenopus sperm to maximise the effectiveness of research using genetically altered frogs.
Q37280146Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes.
Q64062735Modeling congenital kidney diseases in
Q90356966Six1 and Irx1 have reciprocal interactions during cranial placode and otic vesicle formation
Q92930977Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development
Q28081644Transcriptional regulation of cranial sensory placode development
Q28607001Using Xenopus to discover new genes involved in branchiootorenal spectrum disorders

Search more.