Sliding clamps of DNA polymerases

scientific article published on December 1993

Sliding clamps of DNA polymerases is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1006/JMBI.1993.1644
P698PubMed publication ID7903401

P2093author name stringKuriyan J
O'Donnell M
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectDNA polymerase processivity factor activityQ14902234
P304page(s)915-925
P577publication date1993-12-01
P1433published inJournal of Molecular BiologyQ925779
P1476titleSliding clamps of DNA polymerases
P478volume234

Reverse relations

cites work (P2860)
Q44655898A Positive Role for the Ku Complex in DNA Replication Following Strand Break Damage in Mammals
Q28244105A complex consisting of human replication factor C p40, p37, and p36 subunits is a DNA-dependent ATPase and an intermediate in the assembly of the holoenzyme
Q28610350A conserved region in the amino terminus of DNA polymerase delta is involved in proliferating cell nuclear antigen binding
Q36656088A model for targeted substitution mutagenesis during SOS replication of double-stranded DNA containing cis-syn cyclobutane thymine dimers
Q28082955A proposal: Evolution of PCNA's role as a marker of newly replicated DNA
Q28217331A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein
Q44117714AP endonuclease 1 coordinates flap endonuclease 1 and DNA ligase I activity in long patch base excision repair
Q38333538ATP binding to the Escherichia coli clamp loader powers opening of the ring-shaped clamp of DNA polymerase III holoenzyme
Q35835905ATP-dependent structural change of the eukaryotic clamp-loader protein, replication factor C.
Q49320874Accessory proteins function as matchmakers in the assembly of the T4 DNA polymerase holoenzyme
Q54569313Amino acid changes in a unique sequence of bacteriophage T7 DNA polymerase alter the processivity of nucleotide polymerization.
Q38304440An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps.
Q33894188Archaeal dUTPase enhances PCR amplifications with archaeal DNA polymerases by preventing dUTP incorporation
Q77955219Architecture of the active DNA polymerase delta.proliferating cell nuclear antigen.template-primer complex
Q47352288Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. III. Interface between two polymerases and the clamp loader
Q24806674Biochemical characterization of DNA damage checkpoint complexes: clamp loader and clamp complexes with specificity for 5' recessed DNA
Q78591262Biochemical characterization of interactions between DNA polymerase and single-stranded DNA-binding protein in bacteriophage RB69
Q35834562Bipartite DNA-binding region of the Epstein-Barr virus BMRF1 product essential for DNA polymerase accessory function
Q43706808Building a replisome solution structure by elucidation of protein-protein interactions in the bacteriophage T4 DNA polymerase holoenzyme
Q33336898Characterization of plant proliferating cell nuclear antigen (PCNA) and flap endonuclease-1 (FEN-1), and their distribution in mitotic and meiotic cell cycles.
Q35832831Characterization of proliferating cell nuclear antigen (PCNA) from pathogenic yeast Candida albicans and its functional analyses in S. cerevisiae
Q34177114Clamped-filament elongation model for actin-based motors
Q37481755Comparative analysis of proteomes and functionomes provides insights into origins of cellular diversification
Q37536008Copy-choice recombination mediated by DNA polymerase III holoenzyme from Escherichia coli
Q42639942Core-sigma interaction: probing the interaction of the bacteriophage T4 gene 55 promoter recognition protein with E.coli RNA polymerase core
Q37097624Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer
Q58580556DNA Sliding Clamps as Therapeutic Targets
Q36590553DNA polymerase delta isolated from Schizosaccharomyces pombe contains five subunits
Q24548224DNA recognition properties of the N-terminal DNA binding domain within the large subunit of replication factor C
Q33860535DNA replication at high resolution.
Q40672390DNA replication: enzymology and mechanisms
Q37638382Detecting the ability of viral, bacterial and eukaryotic replication proteins to track along DNA.
Q57753687Diffusion of ring-shaped proteins along DNA: case study of sliding clamps
Q36631795Direct molecular level measurements of the electrostatic properties of a protein surface
Q38970740Disentangling polydispersity in the PCNA-p15PAF complex, a disordered, transient and multivalent macromolecular assembly.
Q95802252DnaX complex of Escherichia coli DNA polymerase III holoenzyme. Physical characterization of the DnaX subunits and complexes
Q34057692DnaX complex of Escherichia coli DNA polymerase III holoenzyme. The chi psi complex functions by increasing the affinity of tau and gamma for delta.delta' to a physiologically relevant range
Q34365405Dynamic protein interactions in the bacteriophage T4 replisome.
Q41076765Dynamics of DNA-tracking by two sliding-clamp proteins.
Q52207061Electrostatic potentials of DNA. Comparative analysis of promoter and nonpromoter nucleotide sequences.
Q34816568Elongation by RNA polymerase II: structure-function relationship
Q52537028Embryonic PCNA: a missing link?
Q33598720Evolution of DNA replication protein complexes in eukaryotes and Archaea
Q38829896Evolution of replication machines
Q44298003Examination of the role of the clamp-loader and ATP hydrolysis in the formation of the bacteriophage T4 polymerase holoenzyme
Q35497978Expression of the p12 subunit of human DNA polymerase δ (Pol δ), CDK inhibitor p21(WAF1), Cdt1, cyclin A, PCNA and Ki-67 in relation to DNA replication in individual cells
Q42060635Functional interactions among the subunits of replication factor C potentiate and modulate its ATPase activity
Q33209669GFP-PCNA as an S-phase marker in embryos during the first and subsequent cell cycles
Q33638763Herpes simplex virus processivity factor UL42 imparts increased DNA-binding specificity to the viral DNA polymerase and decreased dissociation from primer-template without reducing the elongation rate.
Q24545747Identification of DNA replication and cell cycle proteins that interact with PCNA
Q22253483Identification of a fourth subunit of mammalian DNA polymerase delta
Q33351233Identification of polymerase and processivity inhibitors of vaccinia DNA synthesis using a stepwise screening approach
Q33779045Inactivation of Escherichia coli DnaA protein by DNA polymerase III and negative regulations for initiation of chromosomal replication
Q34480026Initiation and termination of DNA replication during S phase in relation to cyclins D1, E and A, p21WAF1, Cdt1 and the p12 subunit of DNA polymerase δ revealed in individual cells by cytometry
Q36624461Interaction of herpes simplex virus type 1 DNA polymerase and the UL42 accessory protein with a model primer template
Q34439756Intricacies in ATP-dependent clamp loading: variations across replication systems
Q38320232Isolation and characterization of a split B-type DNA polymerase from the archaeon Methanobacterium thermoautotrophicum deltaH.
Q24652349Mammalian DNA polymerase auxiliary proteins: analysis of replication factor C-catalyzed proliferating cell nuclear antigen loading onto circular double-stranded DNA
Q38331739Maturation of bacteriophage T4 lagging strand fragments depends on interaction of T4 RNase H with T4 32 protein rather than the T4 gene 45 clamp
Q42646239Mechanism of beta clamp opening by the delta subunit of Escherichia coli DNA polymerase III holoenzyme.
Q47356334Mechanism of formation of a toroid around DNA by the mismatch sensor protein.
Q73086540Mechanism of the E. coli tau processivity switch during lagging-strand synthesis
Q34046401Mechanisms of DNA replication.
Q34484259Membrane topology and DNA-binding ability of the Streptococcal CpsA protein
Q33305049Mismatch Repair proteins are recruited to replicating DNA through interaction with Proliferating Cell Nuclear Antigen (PCNA)
Q34019106Motion and enzymatic degradation of DNA in the atomic force microscope.
Q44259001Mutational and functional analysis of a segment of the sigma family bacteriophage T4 late promoter recognition protein gp55.
Q54615382Nucleotide sequence of the recF gene cluster from Staphylococcus aureus and complementation analysis in Bacillus subtilis recF mutants.
Q54512652On models and methods for studying polymerase translocation.
Q36542013Opening of a monomer-monomer interface of the trimeric bacteriophage T4-coded GP45 sliding clamp is required for clamp loading onto DNA.
Q37587046Overexpression of PCNA Attenuates Oxidative Stress-Caused Delay of Gap-Filling during Repair of UV-Induced DNA Damage
Q30449985POT1-TPP1 enhances telomerase processivity by slowing primer dissociation and aiding translocation
Q36247484Phosphorylation of the PCNA binding domain of the large subunit of replication factor C on Thr506 by cyclin-dependent kinases regulates binding to PCNA
Q33334586Plant homologue of flap endonuclease-1: molecular cloning, characterization, and evidence of expression in meristematic tissues
Q34065994Polymerases and the replisome: machines within machines.
Q40018767Pre-mRNA topology is important for 3'-end formation in Saccharomyces cerevisiae and mammals
Q24647623Processive phosphorylation of alternative splicing factor/splicing factor 2
Q33756104Processivity factor of DNA polymerase and its expanding role in normal and translesion DNA synthesis
Q41728429Processivity of DNA polymerases: two mechanisms, one goal
Q38630603Proliferating Cell Nuclear Antigen Has an Association with Prognosis and Risks Factors of Cancer Patients: a Systematic Review
Q38805962Proliferating cell nuclear antigen restores the enzymatic activity of a DNA ligase I deficient in DNA binding
Q47714565Protein-PCNA interactions: a DNA-scanning mechanism?
Q41444690RNA polymerase slides home: pause and termination site recognition
Q36021385Recognition of a human arrest site is conserved between RNA polymerase II and prokaryotic RNA polymerases
Q36685363Reconstitution of human replication factor C from its five subunits in baculovirus-infected insect cells
Q38050704Regulation of human DNA polymerase delta in the cellular responses to DNA damage
Q28610371Replication factor C disengages from proliferating cell nuclear antigen (PCNA) upon sliding clamp formation, and PCNA itself tethers DNA polymerase delta to DNA
Q54580631Replisome assembly reveals the basis for asymmetric function in leading and lagging strand replication.
Q33571008Replisome dynamics and use of DNA trombone loops to bypass replication blocks.
Q27630643Restriction enzyme BsoBI-DNA complex: a tunnel for recognition of degenerate DNA sequences and potential histidine catalysis
Q37621526Rules governing the efficiency and polarity of loading a tracking clamp protein onto DNA: determinants of enhancement in bacteriophage T4 late transcription
Q46726294Schizosaccharomyces pombe proliferating cell nuclear antigen mutations affect DNA polymerase delta processivity
Q36838171Single-molecule investigation of the T4 bacteriophage DNA polymerase holoenzyme: multiple pathways of holoenzyme formation
Q33830292Sliding clamps: a (tail)ored fit.
Q57784305Stochastic Processes and Component Plasticity Governing DNA Mismatch Repair
Q34288808Structural and functional similarities of prokaryotic and eukaryotic DNA polymerase sliding clamps
Q38296691Structure and function of the UvrB protein
Q24528489Structure and function of type II DNA topoisomerases
Q28297396Structure-Function Relationship of the Eukaryotic DNA Replication Factor, Proliferating Cell Nuclear Antigen
Q42725742Structure-based characterization of multiprotein complexes
Q27732664The 1.85 A structure of vaccinia protein VP39: a bifunctional enzyme that participates in the modification of both mRNA ends
Q36889863The C-terminal domain of p21 inhibits nucleotide excision repair In vitro and In vivo
Q36422907The C-terminal region of Schizosaccaromyces pombe proliferating cell nuclear antigen is essential for DNA polymerase activity
Q24293607The POT1-TPP1 telomere complex is a telomerase processivity factor
Q26744520The Regulation of DNA Damage Tolerance by Ubiquitin and Ubiquitin-Like Modifiers
Q27625216The crystal structure of an unusual processivity factor, herpes simplex virus UL42, bound to the C terminus of its cognate polymerase
Q74105331The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli
Q46707513The far reaches of enzymology
Q34181411The genetic core of the universal ancestor
Q33885011The human cytomegalovirus UL44 C clamp wraps around DNA.
Q71985237The influence of the proliferating cell nuclear antigen-interacting domain of p21(CIP1) on DNA synthesis catalyzed by the human and Saccharomyces cerevisiae polymerase delta holoenzymes
Q35909239The initiator protein E1 binds to the bovine papillomavirus origin of replication as a trimeric ring-like structure
Q46718937The mechanism of transcriptional activation by the topologically DNA-linked sliding clamp of bacteriophage T4.
Q42719319The ribosome structure controls and directs mRNA entry, translocation and exit dynamics
Q35890006The role of the chromatin assembly complex (CAF-1) and its p60 subunit (CHAF1b) in homeostasis and disease
Q34479902The structure of a ring-opened proliferating cell nuclear antigen-replication factor C complex revealed by fluorescence energy transfer
Q39594606The versatility of paramyxovirus RNA polymerase stuttering
Q73813717Thermus thermophilis dnaX homolog encoding gamma- and tau-like proteins of the chromosomal replicase
Q41690555Toroidal proteins: running rings around DNA.
Q78170535Trading places on DNA--a three-point switch underlies primer handoff from primase to the replicative DNA polymerase
Q35621685Transcription of genes encoding DNA replication proteins is coincident with cell cycle control of DNA replication in Caulobacter crescentus
Q38303427Transcriptional regulation of the Drosophila rfc1 gene by the DRE-DREF pathway
Q35659140Use of a macromolecular crowding agent to dissect interactions and define functions in transcriptional activation by a DNA-tracking protein: bacteriophage T4 gene 45 protein and late transcription
Q27664642Vaccinia Virus D4 Mutants Defective in Processive DNA Synthesis Retain Binding to A20 and DNA
Q64885759Vertical-scanning mutagenesis of a critical tryptophan in the "minor groove binding track" of HIV-1 reverse transcriptase. Major groove DNA adducts identify specific protein interactions in the minor groove.
Q28138775hMSH2-hMSH6 forms a hydrolysis-independent sliding clamp on mismatched DNA
Q24605141p21Cip1/Waf1 disrupts the recruitment of human Fen1 by proliferating-cell nuclear antigen into the DNA replication complex

Search more.