DNA methylation patterns and gene expression associated with litter size in Berkshire pig placenta

scientific article published on 7 September 2017

DNA methylation patterns and gene expression associated with litter size in Berkshire pig placenta is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PONE.0184539
P932PMC publication ID5589248
P698PubMed publication ID28880934

P50authorSang Mi AnQ88930192
P2093author name stringIl-Suk Kim
Tae Wan Kim
Chul Wook Kim
Da Hye Park
Deok Gyeong Kang
Hwa Chun Park
Jeongim Ha
Jung Hye Hwang
Go Eun Yu
Seulgi Kwon
P2860cites workDNA methylation patterns associate with genetic and gene expression variation in HapMap cell linesQ21184030
Targeted and genome-scale strategies reveal gene-body methylation signatures in human cellsQ28239651
Factors that control the tissue-specific transcription of the gene for phosphoenolpyruvate carboxykinase-CQ28252951
Endogenous type II cGMP-dependent protein kinase exists as a dimer in membranes and can Be functionally distinguished from the type I isoformsQ28576436
Maternal low protein diet restricted to the preimplantation period induces a gender-specific change on hepatic gene expression in rat fetusesQ28581746
Functions of DNA methylation: islands, start sites, gene bodies and beyondQ29547260
HTSeq--a Python framework to work with high-throughput sequencing dataQ29614489
DNA methylation: roles in mammalian developmentQ29616796
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genomeQ29616819
DNA methylation landscapes: provocative insights from epigenomicsQ29617144
CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing dataQ30560764
TCC: an R package for comparing tag count data with robust normalization strategiesQ30654220
Selection for placental efficiency in swine: genetic parameters and trends.Q51976294
Activity of placental enzymes of carbohydrate and lipid metabolism in normal, toxemic and small-for-date pregnanciesQ67769054
Selection for uterine capacity improves lifetime productivity of sowsQ87275608
Dynamic changes in the human methylome during differentiationQ33736539
Conservation and divergence of methylation patterning in plants and animalsQ33928315
Genome-wide DNA methylation changes in skeletal muscle between young and middle-aged pigsQ34100232
Genome-wide evolutionary analysis of eukaryotic DNA methylation.Q34110385
The imprinted gene DIO3 is a candidate gene for litter size in pigs.Q34185730
Whole-genome bisulfite sequencing of multiple individuals reveals complementary roles of promoter and gene body methylation in transcriptional regulation.Q34304018
Gene body methylation can alter gene expression and is a therapeutic target in cancer.Q34471361
Comparative aspects of placental efficiency.Q34617133
DNA methylation, an epigenetic mode of gene expression regulation in reproductive scienceQ34867496
Altered imprinted gene expression and methylation patterns in mid-gestation aborted cloned porcine fetuses and placentasQ35320849
The porcine chloride channel calcium-activated family member pCLCA4a mirrors lung expression of the human hCLCA4.Q35768133
Identification of Differentially Expressed Genes Associated with Litter Size in Berkshire Pig PlacentaQ35989750
The IGF axis in baboon pregnancy: placental and systemic responses to feeding 70% global ad libitum dietQ36168755
Silence of the genes--mechanisms of long-term repressionQ36191962
Mechanism of the inhibition of Ca2+-activated Cl- currents by phosphorylation in pulmonary arterial smooth muscle cellsQ36295772
Dynamic DNA methylation across diverse human cell lines and tissuesQ36660155
Mechanisms of regulation of litter size in pigs on the genome levelQ36905926
Hypomethylation coordinates antagonistically with hypermethylation in cancer development: a case study of leukemiaQ37137148
Reversible DNA methylation regulates seasonal photoperiodic time measurementQ37236377
Chronic late-gestation hypoglycemia upregulates hepatic PEPCK associated with increased PGC1alpha mRNA and phosphorylated CREB in fetal sheep.Q37378064
DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos.Q37729754
Epigenetics: a possible role in acute and transgenerational regulation of dairy cow milk productionQ37995769
cGMP-dependent protein kinases (cGK).Q38109544
Intragenic DNA methylation in transcriptional regulation, normal differentiation and cancerQ38128454
A diverse epigenetic landscape at human exons with implication for expressionQ38900677
Ca2+ sparks activate K+ and Cl- channels, resulting in spontaneous transient currents in guinea-pig tracheal myocytesQ39480338
Replication timing-related and gene body-specific methylation of active human genes.Q39626565
Gene body-specific methylation on the active X chromosomeQ40166744
Enzymes of glucose and fatty acid metabolism in early and term human placentaQ40307713
Selection of appropriate reference genes for RT-qPCR analysis in Berkshire, Duroc, Landrace, and Yorkshire pigsQ41638239
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.Q41836564
Proteomic analysis of reproduction proteins involved in litter size from porcine placentaQ41955001
Spontaneous Ca2+ activated Cl- currents in isolated urethral smooth muscle cellsQ43699240
Increased homocysteine and S-adenosylhomocysteine concentrations and DNA hypomethylation in vascular diseaseQ44525979
Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cellsQ45092709
Spontaneous transient depolarizations in lymphatic vessels of the guinea pig mesentery: pharmacology and implication for spontaneous contractilityQ46368320
Sperm DNA methylation analysis in swine reveals conserved and species-specific methylation patterns and highlights an altered methylation at the GNAS locus in infertile boarsQ46824742
Correlated response in placental efficiency in swine selected for an index of components of lifter sizeQ47172676
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue9
P407language of work or nameEnglishQ1860
P921main subjectDNA methylationQ874745
P304page(s)e0184539
P577publication date2017-09-07
P1433published inPLOS OneQ564954
P1476titleDNA methylation patterns and gene expression associated with litter size in Berkshire pig placenta
P478volume12