A screening methodology based on Random Forests to improve the detection of gene-gene interactions

scientific article published on 12 May 2010

A screening methodology based on Random Forests to improve the detection of gene-gene interactions is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1037390200
P356DOI10.1038/EJHG.2010.48
P2888exact matchhttps://scigraph.springernature.com/pub.10.1038/ejhg.2010.48
P932PMC publication ID2987456
P698PubMed publication ID20461113
P5875ResearchGate publication ID44590822

P50authorFrancesc Castro-ginerQ42824523
Kristel Van SteenQ55094104
Manolis KogevinasQ28320569
Guy BaeleQ29397325
P2093author name stringPierre Geurts
Lizzy De Lobel
P2860cites workA computationally efficient hypothesis testing method for epistasis analysis using multifactor dimensionality reductionQ34803162
The Ubiquitous Nature of Epistasis in Determining Susceptibility to Common Human DiseasesQ35582337
Time to draw breath: asthma-susceptibility genes are identifiedQ35773264
Neuropeptide S and G protein-coupled receptor 154 modulate macrophage immune responsesQ40294852
Exploring the performance of Multifactor Dimensionality Reduction in large scale SNP studies and in the presence of genetic heterogeneity among epistatic disease modelsQ41972953
The protective effect of farm animal exposure on childhood allergy is modified by NPSR1 polymorphismsQ44093576
TNFA -308G>A in two international population-based cohorts and risk of asthma.Q46667277
Accounting for variability in the use of permutation testing to detect quantitative trait loci.Q47592349
Genome-wide strategies for detecting multiple loci that influence complex diseases.Q53624440
Identifying SNPs predictive of phenotype using random forestsQ57363161
Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival ForestsQ22673963
Cloning and characterization of dipeptidyl peptidase 10, a new member of an emerging subgroup of serine proteasesQ24298613
Expression and function of NPSR1/GPRA in the lung before and after induction of asthma-like diseaseQ28251020
Characterization of a common susceptibility locus for asthma-related traitsQ28255640
Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, missing data, phenocopy, and genetic heterogeneityQ33185819
Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancerQ33951229
Positional cloning of a novel gene influencing asthma from chromosome 2q14.Q34270888
A testing framework for identifying susceptibility genes in the presence of epistasisQ34398730
P433issue10
P921main subjectrandom forestQ245748
P304page(s)1127-1132
P577publication date2010-05-12
P1433published inEuropean Journal of Human GeneticsQ2155433
P1476titleA screening methodology based on Random Forests to improve the detection of gene-gene interactions
P478volume18

Reverse relations

cites work (P2860)
Q34482182A roadmap to multifactor dimensionality reduction methods
Q34269179A two-stage random forest-based pathway analysis method
Q36561182Application of a spatially-weighted Relief algorithm for ranking genetic predictors of disease
Q34113547Comparison of strategies to detect epistasis from eQTL data
Q34333936Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?
Q38247072Detecting epistasis in human complex traits
Q49622066Discovery of cell-type specific DNA motif grammar in cis-regulatory elements using random Forest.
Q38179251Epistatic effects of multiple receptor genes on pathophysiology of asthma - its limits and potential for clinical application
Q38102667Explaining microbial phenotypes on a genomic scale: GWAS for microbes
Q35138479Exploiting SNP correlations within random forest for genome-wide association studies
Q34342451Genetic polymorphisms and associated susceptibility to asthma
Q37685365Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress
Q40095911Identification of immune correlates of protection in Shigella infection by application of machine learning
Q26861541Integrative systems biology approaches in asthma pharmacogenomics
Q55428338Machine Learning and Radiogenomics: Lessons Learned and Future Directions.
Q35158129Random forests for genetic association studies.
Q34252126Random forests for genomic data analysis
Q35101681Random forests on Hadoop for genome-wide association studies of multivariate neuroimaging phenotypes
Q35627374TRM: a powerful two-stage machine learning approach for identifying SNP-SNP interactions
Q27003480Towards the identification of the loci of adaptive evolution
Q36672545Trees Assembling Mann-Whitney approach for detecting genome-wide joint association among low-marginal-effect loci

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