Aligning coding sequences with frameshift extension penalties.

scientific article

Aligning coding sequences with frameshift extension penalties. is …
instance of (P31):
scholarly articleQ13442814

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P818arXiv ID1610.08809
P8978DBLP publication IDjournals/almob/JammaliKRBSO17
P6179Dimensions Publication ID1084251768
P356DOI10.1186/S13015-017-0101-4
P8608Fatcat IDrelease_l34gxtbv7vftjkrxjsgrutspju
P724Internet Archive IDarxiv-1610.08809
P932PMC publication ID5374649
P698PubMed publication ID28373895

P50authorSafa JammaliQ87744388
P2093author name stringMichelle Scott
François Bélanger
Aïda Ouangraoua
Esaie Kuitche
Ayoub Rachati
P2860cites workTranslatorX: multiple alignment of nucleotide sequences guided by amino acid translationsQ41862274
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Optimal sequence alignment using affine gap costsQ56456148
The evolutionary landscape of alternative splicing in vertebrate speciesQ56894874
Aligning coding DNA in the presence of frame-shift errorsQ58210960
Back-translation for discovering distant protein homologies in the presence of frameshift mutationsQ21203110
A frameshift mutation in NOD2 associated with susceptibility to Crohn's diseaseQ22251291
Pancreatic agenesis attributable to a single nucleotide deletion in the human IPF1 gene coding sequenceQ24311830
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomesQ24655027
A general method applicable to the search for similarities in the amino acid sequence of two proteinsQ27860563
MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codonsQ28334425
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree buildingQ29547665
NCBI BLAST: a better web interfaceQ29614461
Ensembl 2015Q29615570
A genomic view of alternative splicingQ29615892
Splign: algorithms for computing spliced alignments with identification of paralogsQ33336883
Assessment of orthologous splicing isoforms in human and mouse orthologous genesQ33710087
Nucleotide deletion resulting in frameshift as a possible cause of complete thyroxine-binding globulin deficiency in six Japanese familiesQ34015125
An out-of-frame overlapping reading frame in the ataxin-1 coding sequence encodes a novel ataxin-1 interacting proteinQ34037160
Frequent appearance of novel protein-coding sequences by frameshift translationQ34569658
Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA.Q36690550
DIALIGN: multiple DNA and protein sequence alignment at BiBiServQ41010601
On programmed ribosomal frameshifting: the alternative proteomesQ41454507
P921main subjectsequence alignmentQ827246
P304page(s)10
P577publication date2017-03-31
P1433published inAlgorithms for Molecular BiologyQ15749320
P1476titleAligning coding sequences with frameshift extension penalties
P478volume12

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