scholarly article | Q13442814 |
P50 | author | Karel Berka | Q43370830 |
Markéta Paloncýová | Q61467084 | ||
Michal Otyepka | Q37368799 | ||
P2860 | cites work | NMR-based molecular ruler for determining the depth of intercalants within the lipid bilayer Part II. The preparation of a molecular ruler | Q43526822 |
Superoxide organic chemistry within the liposomal bilayer, part II: a correlation between location and chemistry | Q43928149 | ||
Permeation of membranes by ribose and its diastereomers. | Q45923991 | ||
NMR-based molecular ruler for determining the depth of intercalants within the lipid bilayer Part I. Discovering the guidelines | Q46449436 | ||
Behaviour of small solutes and large drugs in a lipid bilayer from computer simulations | Q46830635 | ||
Computer simulation of the distribution of hexane in a lipid bilayer: spatially resolved free energy, entropy, and enthalpy profiles | Q46877088 | ||
Permeability of small molecules through a lipid bilayer: a multiscale simulation study. | Q51803743 | ||
Biomolecular simulations of membranes: Physical properties from different force fields | Q59706326 | ||
A comparison of methods to compute the potential of mean force | Q79387967 | ||
Functional group dependence of solute partitioning to various locations within a DOPC bilayer: a comparison of molecular dynamics simulations with experiment | Q83859436 | ||
The Influence of Cholesterol on the Properties and Permeability of Hypericin Derivatives in Lipid Membranes | Q86769387 | ||
Membrane position of ibuprofen agrees with suggested access path entrance to cytochrome P450 2C9 active site | Q24609983 | ||
Membrane lipids: where they are and how they behave | Q24653084 | ||
VMD: visual molecular dynamics | Q27860554 | ||
PRODRG: a tool for high-throughput crystallography of protein-ligand complexes | Q27860633 | ||
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation | Q27860944 | ||
GROMACS: fast, flexible, and free | Q27860998 | ||
CYP2A6: a human coumarin 7-hydroxylase | Q28142938 | ||
Canonical sampling through velocity rescaling | Q29616131 | ||
Validation of the 53A6 GROMOS force field | Q30986204 | ||
Partitioning of nonsteroidal antiinflammatory drugs in lipid membranes: a molecular dynamics simulation study. | Q33647834 | ||
A Combined Metadynamics and Umbrella Sampling Method for the Calculation of Ion Permeation Free Energy Profiles | Q33998198 | ||
Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane | Q34047271 | ||
Escaping free-energy minima | Q34151010 | ||
Cytochromes P450 and metabolism of xenobiotics | Q34298980 | ||
Conformational sampling for the impatient | Q35669059 | ||
Membrane topology of the mammalian P450 cytochromes. | Q35890621 | ||
Distribution of amino acids in a lipid bilayer from computer simulations. | Q36538236 | ||
Liposomal drug transport: a molecular perspective from molecular dynamics simulations in lipid bilayers | Q36648264 | ||
Setting up and running molecular dynamics simulations of membrane proteins | Q36762780 | ||
Vertebrate membrane proteins: structure, function, and insights from biophysical approaches | Q36922687 | ||
Modeling kinetics of subcellular disposition of chemicals. | Q37194304 | ||
Modulation of UDP-glucuronosyltransferase activity by protein-protein association | Q37611865 | ||
Lipidbook: a public repository for force-field parameters used in membrane simulations. | Q38371294 | ||
Statistical Convergence of Equilibrium Properties in Simulations of Molecular Solutes Embedded in Lipid Bilayers. | Q39678323 | ||
Computer simulation of small molecule permeation across a lipid bilayer: dependence on bilayer properties and solute volume, size, and cross-sectional area | Q40287104 | ||
Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature | Q41775672 | ||
Practical considerations for building GROMOS-compatible small-molecule topologies | Q42789945 | ||
P433 | issue | 4 | |
P304 | page(s) | 1200-1211 | |
P577 | publication date | 2012-02-24 | |
P1433 | published in | Journal of Chemical Theory and Computation | Q1768377 |
P1476 | title | Convergence of Free Energy Profile of Coumarin in Lipid Bilayer | |
P478 | volume | 8 |
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