Molecular architecture of tailed double-stranded DNA phages

scientific article published on January 2014

Molecular architecture of tailed double-stranded DNA phages is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.4161/BACT.28281
P932PMC publication ID3940491
P698PubMed publication ID24616838
P5875ResearchGate publication ID260684508

P50authorMichael RossmannQ101728
Andrei FokineQ115165013
P2860cites workStructure and assembly of bacteriophage T4 headQ21245107
Common ancestry of herpesviruses and tailed DNA bacteriophagesQ24538828
Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1Q24561843
Structure of lactococcal phage p2 baseplate and its mechanism of activationQ24613264
A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatusQ24651984
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatusQ24678411
Structure, assembly, and DNA packaging of the bacteriophage T4 headQ26822645
Principles of virus structural organizationQ27021684
Novel fold and capsid-binding properties of the lambda-phage display platform protein gpDQ27621635
Structure of the coat protein-binding domain of the scaffolding protein from a double-stranded DNA virusQ27622217
Structure of the bacteriophage phi29 DNA packaging motorQ27629039
The solution structure of bacteriophage lambda protein W, a small morphogenetic protein possessing a novel foldQ27631197
Structure of the cell-puncturing device of bacteriophage T4Q27637576
The solution structure of the bacteriophage lambda head-tail joining protein, gpFIIQ27639251
Bacteriophage phi29 scaffolding protein gp7 before and after prohead assemblyQ27641365
Three-dimensional structure of bacteriophage T4 baseplateQ27641848
The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolutionQ27642647
Structural framework for DNA translocation via the viral portal proteinQ27644088
Restriction Endonuclease Inhibitor IPI* of Bacteriophage T4: A Novel Structure for a Dedicated TargetQ27649138
Structure of phage P22 cell envelope–penetrating needleQ27649215
Crystal structure of Escherichia coli phage HK620 tailspike: podoviral tailspike endoglycosidase modules are evolutionarily relatedQ27650795
Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage  29 tailQ27651052
The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forcesQ27653281
Structural basis of enzyme encapsulation into a bacterial nanocompartmentQ27653528
An unexpected twist in viral capsid maturationQ27653708
The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteriaQ27653859
Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary originQ27653977
The phage   major tail protein structure reveals a common evolution for long-tailed phages and the type VI bacterial secretion systemQ27653979
The X-ray crystal structure of the phage lambda tail terminator protein reveals the biologically relevant hexameric ring structure and demonstrates a conserved mechanism of tail termination among diverse long-tailed phagesQ27655425
Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gatingQ27655446
Structural basis for the nuclease activity of a bacteriophage large terminaseQ27655480
Crystallographic Insights into the Autocatalytic Assembly Mechanism of a Bacteriophage Tail SpikeQ27655503
Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like PhagesQ27657805
The crystal structure of bacteriophage HK97 gp6: defining a large family of head-tail connector proteinsQ27658088
Structural basis for the recognition and cleavage of polysialic acid by the bacteriophage K1F tailspike protein EndoNFQ27659132
Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machineQ27659594
P22 Coat Protein Structures Reveal a Novel Mechanism for Capsid Maturation: Stability without Auxiliary Proteins or Chemical CrosslinksQ27660199
Structural changes in a marine podovirus associated with release of its genome into ProchlorococcusQ27662199
Phages have adapted the same protein fold to fulfill multiple functions in virion assemblyQ27663613
The solution structure of the C-terminal Ig-like domain of the bacteriophage λ tail tube proteinQ27664357
Crystal Structure of Bacteriophage SPP1 Distal Tail Protein (gp19.1): A BASEPLATE HUB PARADIGM IN GRAM-POSITIVE INFECTING PHAGESQ27664509
Structure of the bacteriophage T4 long tail fiber receptor-binding tipQ27665551
Defining molecular and domain boundaries in the bacteriophage phi29 DNA packaging motorQ41622435
Cryo-EM study of the Pseudomonas bacteriophage phiKZ.Q41624135
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificitiesQ41624385
Evolution of bacteriophage tails: Structure of T4 gene product 10.Q41626215
Cryo-EM structure of a bacteriophage T4 gp24 bypass mutant: the evolution of pentameric vertex proteins in icosahedral virusesQ41626276
Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29.Q41627345
Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its hostQ41628166
Assembly of a tailed bacterial virus and its genome release studied in three dimensionsQ41633153
Encapsidated conformation of bacteriophage T7 DNA.Q41633537
Structure of bacteriophage SPP1 tail reveals trigger for DNA ejectionQ41807263
Mutational analysis of the Pseudomonas aeruginosa myovirus KZ morphogenetic protease gp175.Q41853361
Role of φ29 connector channel loops in late-stage DNA packaging.Q42015252
Determining DNA packaging strategy by analysis of the termini of the chromosomes in tailed-bacteriophage virionsQ42132042
DNA poised for release in bacteriophage phi29.Q43010634
Mechanochemistry of a viral DNA packaging motorQ43069220
Crystal structure of the polysialic acid-degrading endosialidase of bacteriophage K1F.Q43408014
Portal fusion protein constraints on function in DNA packaging of bacteriophage T4.Q43432636
The NMR structure of the gpU tail-terminator protein from bacteriophage lambda: identification of sites contributing to Mg(II)-mediated oligomerization and biological functionQ43464206
Ig-like domains on bacteriophages: a tale of promiscuity and deceitQ43836417
The portal protein plays essential roles at different steps of the SPP1 DNA packaging processQ44419313
Tail length determination in bacteriophage T4.Q46097153
The mono-ADP-ribosyltransferases Alt and ModB of bacteriophage T4: target proteins identifiedQ46660849
The tail structure of bacteriophage T4 and its mechanism of contraction.Q51367938
DNA packaging of bacteriophage T4 proheads in vitro. Evidence that prohead expansion is not coupled to DNA packaging.Q53767594
A member of the immunoglobulin superfamily in bacteriophage T4Q55122145
The Structure of an Infectious P22 Virion Shows the Signal for Headful DNA PackagingQ63258825
Packaging of coliphage lambda DNA. II. The role of the gene D proteinQ67065423
Locations and amounts of major structural proteins in bacteriophage lambdaQ68934857
Length determination in bacteriophage lambda tailsQ72405349
DNA requirements in vivo for phage T4 packagingQ74311277
On the structure of the glucosylated hydroxymethylcytosine nucleotides of coliphages T2, T4, and T6Q79056865
Structural rearrangements between portal protein subunits are essential for viral DNA translocationQ80186443
Modulation of the viral ATPase activity by the portal protein correlates with DNA packaging efficiencyQ83877207
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virusQ27666541
The Prohead-I Structure of Bacteriophage HK97: Implications for Scaffold-Mediated Control of Particle Assembly and MaturationQ27666752
Structure of bacteriophage  29 head fibers has a supercoiled triple repeating helix-turn-helix motifQ27667204
Three-dimensional structure of a viral genome-delivery portal vertexQ27667540
Structure of the Three N-Terminal Immunoglobulin Domains of the Highly Immunogenic Outer Capsid Protein from a T4-Like BacteriophageQ27668127
Small Terminase Couples Viral DNA Binding to Genome-Packaging ATPase ActivityQ27670661
Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural PlasticityQ27671091
Structural investigations of a Podoviridae streptococcus phage C1, implications for the mechanism of viral entryQ27671524
Structural Conservation of the Myoviridae Phage Tail Sheath Protein FoldQ27676049
Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophagesQ27676489
Structural basis for DNA recognition and loading into a viral packaging motorQ27676491
The Molecular Architecture of the Bacteriophage T4 NeckQ27676589
Phage pierces the host cell membrane with the iron-loaded spikeQ27677208
Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavageQ27677862
Capsid Structure and Its Stability at the Late Stages of Bacteriophage SPP1 AssemblyQ27678606
Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modelingQ27679009
Structural Characterization of the Bacteriophage T7 Tail MachineryQ27679194
Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanismQ27679210
Structure of the receptor-binding carboxy-terminal domain of bacteriophage T7 tail fibersQ27679354
PAAR-repeat proteins sharpen and diversify the type VI secretion system spikeQ27679451
Crystal Structure of pb9, the Distal Tail Protein of Bacteriophage T5: a Conserved Structural Motif among All SiphophagesQ27680450
Structure of P22 Headful Packaging NucleaseQ27681251
Crystal structure of P22 tailspike protein: interdigitated subunits in a thermostable trimerQ27730816
Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptorsQ27733696
Physical Principles in the Construction of Regular VirusesQ28190647
The bacteriophage straight phi29 portal motor can package DNA against a large internal forceQ28199328
Chemical and biological evolution of nucleotide-binding proteinQ28240624
Bacteriophage HK97 capsid assembly and maturationQ28258663
Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopyQ28270483
Genetic basis of bacteriophage HK97 prohead assemblyQ28300227
Experimental test of connector rotation during DNA packaging into bacteriophage phi29 capsidsQ28469140
Bacteriophages and their genomesQ28743530
Topologically linked protein rings in the bacteriophage HK97 capsidQ29615513
Condensed genome structure.Q30412446
Intersubunit coordination in a homomeric ring ATPaseQ30489077
Bacteriophage observations and evolutionQ33187340
5500 Phages examined in the electron microscopeQ33260858
Exclusion of glucosyl-hydroxymethylcytosine DNA containing bacteriophages is overcome by the injected protein inhibitor IPI*.Q33267596
Geometry of phage head constructionQ33755830
Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestryQ33821613
Phi29 family of phagesQ34010356
Functional analysis of the highly antigenic outer capsid protein, Hoc, a virus decoration protein from T4-like bacteriophagesQ34017405
In vitro assembly of the T=13 procapsid of bacteriophage T5 with its scaffolding domain.Q34120093
Genome packaging in virusesQ34167999
Measurements of DNA lengths remaining in a viral capsid after osmotically suppressed partial ejection.Q34188653
The structural organization of DNA packaged within the heads of T4 wild-type, isometric and giant bacteriophagesQ34272616
Bacteriophage adhering to mucus provide a non-host-derived immunity.Q34345695
Comparative genomics and evolution of the tailed-bacteriophages.Q34433982
Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4.Q34765544
Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22Q34785823
Assembly mechanism is the key determinant of the dosage sensitivity of a phage structural proteinQ35064360
Osmotic pressure inhibition of DNA ejection from phage.Q35234453
Bacteriophage assemblyQ35260969
Bacteriophage genomicsQ35565615
Structure and morphogenesis of bacteriophage T4.Q35587956
Nucleic acid packaging in virusesQ35785315
Measurements of single DNA molecule packaging dynamics in bacteriophage lambda reveal high forces, high motor processivity, and capsid transformations.Q35851509
Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability.Q36089343
Cloning and identification of bacteriophage T4 gene 2 product gp2 and action of gp2 on infecting DNA in vivoQ36173291
Possible association between phages, Hoc protein, and the immune systemQ36272976
Bubblegrams reveal the inner body of bacteriophage φKZ.Q36291538
Visualizing a complete Siphoviridae member by single-particle electron microscopy: the structure of lactococcal phage TP901-1.Q36559645
Visualization of uncorrelated, tandem symmetry mismatches in the internal genome packaging apparatus of bacteriophage T7Q36799252
Immunoglobulin-like domains on bacteriophage: weapons of modest damage?Q36926702
Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.Q37037993
A virus DNA gate: zipping and unzipping the packed viral genome.Q37208915
The bacteriophage DNA packaging motorQ37237759
Structure, adsorption to host, and infection mechanism of virulent lactococcal phage p2.Q37254371
The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit.Q37272297
Jumbo bacteriophagesQ37392759
The bacteriophage t7 virion undergoes extensive structural remodeling during infectionQ37416148
Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.Q37547436
Structure-function analysis of the DNA translocating portal of the bacteriophage T4 packaging machineQ37620593
Molecular architecture of the prolate head of bacteriophage T4.Q37646448
Nucleases: diversity of structure, function and mechanism.Q37790458
Morphogenesis of the T4 tail and tail fibersQ37815565
A common evolutionary origin for tailed-bacteriophage functional modules and bacterial machineriesQ37925356
Viral connectors for DNA encapsulationQ37970243
Contractile tail machines of bacteriophagesQ37980623
Long noncontractile tail machines of bacteriophages.Q37980624
Building the machines: scaffolding protein functions during bacteriophage morphogenesisQ37980631
The bacteriophage DNA packaging machine.Q37980637
The dsDNA packaging motor in bacteriophage ø29.Q37980638
Genome gating in tailed bacteriophage capsidsQ37980641
Headful DNA packaging: bacteriophage SPP1 as a model systemQ38082645
Polymorphism of DNA conformation inside the bacteriophage capsid.Q38122097
Structural changes of bacteriophage phi29 upon DNA packaging and releaseQ38977515
Single-molecule studies of viral DNA packagingQ39502768
P15 and P3, the tail completion proteins of bacteriophage T4, both form hexameric rings.Q39726191
Frameshifting in gene 10 of bacteriophage T7.Q39945768
A two-state cooperative expansion converts the procapsid shell of bacteriophage T5 into a highly stable capsid isomorphous to the final virion headQ41611305
The opening of the SPP1 bacteriophage tail, a prevalent mechanism in Gram-positive-infecting siphophagesQ41615629
The bacteriophage genome undergoes a succession of intracapsid phase transitions upon DNA ejectionQ41619936
P433issue1
P304page(s)e28281
P577publication date2014-01-01
P1433published inBacteriophageQ26842056
P1476titleMolecular architecture of tailed double-stranded DNA phages
P478volume4

Reverse relations

cites work (P2860)
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