Hmo1 directs pre-initiation complex assembly to an appropriate site on its target gene promoters by masking a nucleosome-free region

scientific article published on 2 February 2011

Hmo1 directs pre-initiation complex assembly to an appropriate site on its target gene promoters by masking a nucleosome-free region is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKQ1334
P724Internet Archive IDpubmed-PMC3105432
P932PMC publication ID3105432
P698PubMed publication ID21288884
P5875ResearchGate publication ID49805532

P2093author name stringTetsuro Kokubo
Yoshifumi Ohyama
Koji Kasahara
P2860cites workActivation of the TFIID-TFIIA complex with HMG-2Q24324542
Global nucleosome occupancy in yeastQ24801575
Evidence that the Tfg1/Tfg2 dimer interface of TFIIF lies near the active center of the RNA polymerase II initiation complexQ24812696
Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometryQ27930175
An HMG protein, Hmo1, associates with promoters of many ribosomal protein genes and throughout the rRNA gene locus in Saccharomyces cerevisiae.Q27930367
Analysis of the yeast transcription factor TFIIA: distinct functional regions and a polymerase II-specific role in basal and activated transcriptionQ27931415
Sfp1 is a stress- and nutrient-sensitive regulator of ribosomal protein gene expressionQ27931583
Identification of the gene (SSU71/TFG1) encoding the largest subunit of transcription factor TFIIF as a suppressor of a TFIIB mutation in Saccharomyces cerevisiaeQ27931755
Position of the general transcription factor TFIIF within the RNA polymerase II transcription preinitiation complexQ27932382
Sfp1 plays a key role in yeast ribosome biogenesisQ27932899
TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiationQ27933367
TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1.Q27933425
Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.Q27933625
Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA associationQ27933908
Yeast RNA Polymerase II Lacking the Rpb9 Subunit Is Impaired for Interaction with Transcription Factor IIFQ38349718
HSM2 (HMO1) gene participates in mutagenesis control in yeast Saccharomyces cerevisiaeQ38359078
Chromatin opening and transactivator potentiation by RAP1 in Saccharomyces cerevisiaeQ39446550
Transcription activation of yeast ribosomal protein genes requires additional elements apart from binding sites for Abf1p or Rap1pQ40393853
Functional interaction between TFIIB and the Rpb2 subunit of RNA polymerase II: implications for the mechanism of transcription initiationQ40763314
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genomeQ41336121
Highly redundant function of multiple AT-rich sequences as core promoter elements in the TATA-less RPS5 promoter of Saccharomyces cerevisiaeQ41954712
Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeastQ43975761
In vivo synthesis of Taf1p lacking the TAF N-terminal domain using alternative transcription or translation initiation sitesQ45009969
The C-terminal domain of yeast high mobility group protein HMO1 mediates lateral protein accretion and in-phase DNA bending.Q45988208
Genome-organizing factors Top2 and Hmo1 prevent chromosome fragility at sites of S phase transcription.Q53372373
Suppression of a DNA polymerase delta mutation by the absence of the high mobility group protein Hmo1 in Saccharomyces cerevisiae.Q54769438
RNA polymerase II subunit RPB9 is required for accurate start site selectionQ72613078
DNA melting on yeast RNA polymerase II promotersQ72858710
The Pol II initiation complex: finding a place to startQ79853370
Quantitative analysis of in vivo initiator selection by yeast RNA polymerase II supports a scanning modelQ83004882
A functional role for the switch 2 region of yeast RNA polymerase II in transcription start site utilization and abortive initiationQ27934932
Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II.Q27935102
Functions of Saccharomyces cerevisiae TFIIF during transcription start site utilizationQ27935933
A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell sizeQ27936478
Hmo1, an HMG-box protein, belongs to the yeast ribosomal DNA transcription systemQ27936987
Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interactionQ27938360
Characterization of a high mobility group 1/2 homolog in yeastQ27938684
Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II.Q27938709
Growth-regulated recruitment of the essential yeast ribosomal protein gene activator Ifh1.Q27938728
Different roles for abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A geneQ27938874
Evidence that Spt2/Sin1, an HMG-like factor, plays roles in transcription elongation, chromatin structure, and genome stability in Saccharomyces cerevisiaeQ27938910
Assembly of regulatory factors on rRNA and ribosomal protein genes in Saccharomyces cerevisiaeQ27938982
Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 geneQ27938987
Amino acid substitutions in yeast TFIIF confer upstream shifts in transcription initiation and altered interaction with RNA polymerase II.Q27939300
Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitroQ27940171
Hmo1 is required for TOR-dependent regulation of ribosomal protein gene transcriptionQ27940174
Central role of Ifh1p-Fhl1p interaction in the synthesis of yeast ribosomal proteinsQ27940360
The economics of ribosome biosynthesis in yeastQ28131645
Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genomeQ28756588
Evolutionary tinkering with conserved components of a transcriptional regulatory networkQ33540999
Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiaeQ33950127
Three genes are required for trans-activation of Ty transcription in yeastQ33952909
Isolation and analysis of a novel class of suppressor of Ty insertion mutations in Saccharomyces cerevisiaeQ33953714
The transcription factor Ifh1 is a key regulator of yeast ribosomal protein genes.Q34379346
Functional interaction between TFIIB and the Rpb9 (Ssu73) subunit of RNA polymerase II in Saccharomyces cerevisiaeQ34602774
The different (sur)faces of Rap1p.Q35091508
Facts about FACT and transcript elongation through chromatinQ35804601
The sua8 suppressors of Saccharomyces cerevisiae encode replacements of conserved residues within the largest subunit of RNA polymerase II and affect transcription start site selection similarly to sua7 (TFIIB) mutationsQ36643168
Nucleosome positioning and gene regulation: advances through genomicsQ36883122
Mechanisms that specify promoter nucleosome location and identityQ37180651
How eukaryotic genes are transcribedQ37514183
Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylaseQ38304511
A high mobility group protein binds to long CAG repeat tracts and establishes their chromatin organization in Saccharomyces cerevisiaeQ38314380
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P433issue10
P407language of work or nameEnglishQ1860
P304page(s)4136-4150
P577publication date2011-02-02
P1433published inNucleic Acids ResearchQ135122
P1476titleHmo1 directs pre-initiation complex assembly to an appropriate site on its target gene promoters by masking a nucleosome-free region
P478volume39

Reverse relations

cites work (P2860)
Q90287090African trypanosomes expressing multiple VSGs are rapidly eliminated by the host immune system
Q47918740Control of RNA polymerase II-transcribed genes by direct binding of TOR kinase
Q88527539HMGB proteins involved in TOR signaling as general regulators of cell growth by controlling ribosome biogenesis
Q36084323Molecular mechanisms of ribosomal protein gene coregulation.
Q91809405NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region
Q42794947Nucleosome remodeling by the SWI/SNF complex is enhanced by yeast high mobility group box (HMGB) proteins
Q51320057Oligomerization of Hmo1 mediated by box A is essential for DNA binding in vitro and in vivo.
Q51189947Role of Nhp6 and Hmo1 in SWI/SNF occupancy and nucleosome landscape at gene regulatory regions.
Q28074220Yeast HMO1: Linker Histone Reinvented

Search more.