Development of PCR assays targeting genes in O-antigen gene clusters for detection and identification of Escherichia coli O45 and O55 serogroups

scientific article published on August 2005

Development of PCR assays targeting genes in O-antigen gene clusters for detection and identification of Escherichia coli O45 and O55 serogroups is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/AEM.71.8.4919-4924.2005
P8608Fatcat IDrelease_pynsh36gtrfltbzhzhm6g6smga
P932PMC publication ID1183307
P698PubMed publication ID16085897

P2093author name stringYanhong Liu
Michael A Davis
Chitrita DebRoy
Pina M Fratamico
Elisabeth Roberts
P2860cites workThe O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase geneQ39679036
Bacterial polysaccharide synthesis and gene nomenclatureQ41326294
Sequence of the E. coli O104 antigen gene cluster and identification of O104 specific genesQ43638491
A novel method for real time quantitative RT-PCR.Q46544663
The JUMPstart sequence: a 39 bp element common to several polysaccharide gene clustersQ48082065
Repeat unit polysaccharides of bacteria: a model for polymerization resembling that of ribosomes and fatty acid synthetase, with a novel mechanism for determining chain lengthQ48131853
Examination of verocytotoxin producing capacity and determination of the presence of Shiga-like toxin genes in human Escherichia coli isolatesQ54646143
Prevalence and characteristics of necrotoxigenic Escherichia coli (NTEC) strains isolated from diarrhoeic dairy calvesQ64449796
Escherichia coli O:H serotypes isolated from human blood. Prevalence of the K1 antigen with technical details of O and H antigenic determinationQ66904087
Detection and characterization of Shiga toxin-producing Escherichia coli in feral pigeonsQ74257622
Serology, chemistry, and genetics of O and K antigens of Escherichia coliQ24564133
Artemis: sequence visualization and annotationQ27861024
The HMMTOP transmembrane topology prediction serverQ28190632
Principles governing amino acid composition of integral membrane proteins: application to topology predictionQ28285162
Clonal relationships among Escherichia coli strains that cause hemorrhagic colitis and infantile diarrheaQ33489210
Sequencing of Escherichia coli O111 O-antigen gene cluster and identification of O111-specific genes.Q33687710
Organization of Escherichia coli O157 O antigen gene cluster and identification of its specific genesQ33757263
Identification and characterization of integron-mediated antibiotic resistance among Shiga toxin-producing Escherichia coli isolatesQ33989244
Acquisition of the rfb-gnd cluster in evolution of Escherichia coli O55 and O157.Q33994832
Sequence of the Escherichia coli O121 O-antigen gene cluster and detection of enterohemorrhagic E. coli O121 by PCR amplification of the wzx and wzy genesQ35155474
Characterization of the novel factor paa involved in the early steps of the adhesion mechanism of attaching and effacing Escherichia coliQ35165430
Nucleotide sequences of the genes regulating O-polysaccharide antigen chain length (rol) from Escherichia coli and Salmonella typhimurium: protein homology and functional complementationQ36116843
Enterotoxins, colonization factors and serotypes of enterotoxigenic Escherichia coli from humans and animalsQ36538874
Detection of Escherichia coli serogroups O26 and O113 by PCR amplification of the wzx and wzy genesQ36930269
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)4919-4924
P577publication date2005-08-01
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titleDevelopment of PCR assays targeting genes in O-antigen gene clusters for detection and identification of Escherichia coli O45 and O55 serogroups
P478volume71

Reverse relations

cites work (P2860)
Q36315394A new O-antigen gene cluster has a key role in the virulence of the Escherichia coli meningitis clone O45:K1:H7
Q92650710A sensitive method for the recovery of Escherichia coli serogroup O55 including Shiga toxin-producing variants for potential use in outbreaks
Q64055558Application of lab-on-a-chip multiplex cassette PCR for the detection of enterohemorrhagic Escherichia coli
Q34338238Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes
Q33928020Characterization of Escherichia coli virulence genes, pathotypes and antibiotic resistance properties in diarrheic calves in Iran
Q44172452Chromogenic agar medium for detection and isolation of Escherichia coli serogroups O26, O45, O103, O111, O121, and O145 from fresh beef and cattle feces
Q35913112DNA microarray-based identification of serogroups and virulence gene patterns of Escherichia coli isolates associated with porcine postweaning diarrhea and edema disease
Q37966070Detection of O antigens in Escherichia coli
Q92292598Detection of pathogenic Escherichia coli on potentially contaminated beef carcasses using cassette PCR and conventional PCR
Q42272958Determination of glycosyltransferase specificities for the Escherichia coli O111 O antigen by a generic approach
Q33536166Development of O-antigen gene cluster-specific PCRs for rapid typing six epidemic serogroups of Leptospira in China
Q54394857Development of a serogroup-specific DNA microarray for identification of Escherichia coli strains associated with bovine septicemia and diarrhea.
Q35221012Development of a serotype-specific DNA microarray for identification of some Shigella and pathogenic Escherichia coli strains
Q35164545Development of an allele-specific PCR assay for simultaneous sero-typing of avian pathogenic Escherichia coli predominant O1, O2, O18 and O78 strains
Q49966801Effect of Exposure Time and Organic Matter on Efficacy of Antimicrobial Compounds against Shiga Toxin-Producing Escherichia coli and Salmonella
Q42659928Escherichia coli serogroup O2 and O28ac O-antigen gene cluster sequences and detection of pathogenic E. coli O2 and O28ac by PCR.
Q54327956Evaluation of commonly used antimicrobial interventions for fresh beef inoculated with Shiga toxin-producing Escherichia coli serotypes O26, O45, O103, O111, O121, O145, and O157:H7.
Q50889023Evaluation of pathogenic Escherichia coli occurrence in vegetable samples from district bazaars in Istanbul using real-time PCR.
Q34925036Isolation of a bacteriophage specific for a new capsular type of Klebsiella pneumoniae and characterization of its polysaccharide depolymerase
Q28546827Molecular Characterization of Enterotoxin-Producing Escherichia coli Collected in 2011-2012, Russia
Q39753264Molecular analysis of the Enterobacter sakazakii O-antigen gene locus
Q54295364Molecular characterization of Shiga toxin-producing Escherichia coli isolated from ruminant and donkey raw milk samples and traditional dairy products in Iran.
Q53082234Molecular serogrouping of Escherichia coli.
Q54293897Polyester cloth-based hybridization array system for identification of enterohemorrhagic Escherichia coli serogroups O26, O45, O103, O111, O121, O145, and O157.
Q42688528Predicting the presence of non-O157 Shiga toxin-producing Escherichia coli in ground beef by using molecular tests for Shiga toxins, intimin, and O serogroups
Q42062054Prevalence and characterization of non-O157 shiga toxin-producing Escherichia coli isolates from commercial ground beef in the United States
Q39428229Progress in our understanding of Wzx flippase for translocation of bacterial membrane lipid-linked oligosaccharide
Q35868384Rapid and specific detection of escherichia coli serogroups O26, O45, O103, O111, O121, O145, and O157 in ground beef, beef trim, and produce by loop-mediated isothermal amplification.
Q33910238Sequence-based typing of genetic targets encoded outside of the O-antigen gene cluster is indicative of Shiga toxin-producing Escherichia coli serogroup lineages
Q42131410Serogroups, virulence genes and antibiotic resistance in Shiga toxin-producing Escherichia coli isolated from diarrheic and non-diarrheic pediatric patients in Iran.
Q54321748Shiga toxin-producing Escherichia coli isolated from bovine mastitic milk: serogroups, virulence factors, and antibiotic resistance properties.
Q37142131Structure and genetics of Shigella O antigens
Q54336965Validation of pepperoni process for control of Shiga toxin-producing Escherichia coli.
Q90420325Variability in Characterizing Escherichia coli from Cattle Feces: A Cautionary Tale
Q35141096Virulence factors, serogroups and antimicrobial resistance properties of Escherichia coli strains in fermented dairy products

Search more.