The genomic signature of splicing-coupled selection differs between long and short introns.

scientific article published on 30 August 2011

The genomic signature of splicing-coupled selection differs between long and short introns. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/MOLBEV/MSR201
P932PMC publication ID3245539
P698PubMed publication ID21878685
P5875ResearchGate publication ID51606483

P50authorAshley FarlowQ55155194
P2093author name stringChristian Schlötterer
Liushuai Hua
Marlies Dolezal
P2860cites workQuasispecies theory in the context of population geneticsQ21283965
Ubiquitous selective constraints in the Drosophila genome revealed by a genome-wide interspecies comparisonQ24548803
Quasispecies made simpleQ24810300
Patterns of intron sequence evolution in Drosophila are dependent upon length and GC contentQ24811259
Exon recognition in vertebrate splicingQ29615088
Pervasive natural selection in the Drosophila genome?Q33463271
Large introns in relation to alternative splicing and gene evolution: a case study of Drosophila bruno-3Q33511369
Competing upstream 5' splice sites enhance the rate of proximal splicingQ33769266
The organization of nucleosomes around splice sitesQ33871238
On the utility of short intron sequences as a reference for the detection of positive and negative selection in DrosophilaQ33883110
A computational analysis of sequence features involved in recognition of short intronsQ33944374
Multiple splicing defects in an intronic false exonQ33965191
The architecture of pre-mRNAs affects mechanisms of splice-site pairing.Q34132523
A test of Chargaff's second ruleQ34477772
Subdivision of large introns in Drosophila by recursive splicing at nonexonic elementsQ34575531
Combinatorial control of exon recognition.Q34585102
Coevolution of genomic intron number and splice sitesQ36795050
Complex selection on 5' splice sites in intron-rich organismsQ37417338
Intron definition in splicing of small Drosophila intronsQ41469835
High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegansQ41864064
Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competitionQ41984492
Selective constraints on intron evolution in DrosophilaQ42017329
Adaptive evolution of non-coding DNA in DrosophilaQ46601551
Intron size and natural selectionQ47255836
Gene expression, intron density, and splice site strength in Drosophila and Caenorhabditis.Q52683033
The effects of selection against spurious transcription factor binding sites.Q52950810
Translational control of intron splicing in eukaryotesQ58862345
P433issue1
P304page(s)21-24
P577publication date2011-08-30
P1433published inMolecular Biology and EvolutionQ1992656
P1476titleThe genomic signature of splicing-coupled selection differs between long and short introns
P478volume29

Reverse relations

cites work (P2860)
Q33855473A mutation in a splicing factor that causes retinitis pigmentosa has a transcriptome-wide effect on mRNA splicing.
Q45147886A novel splicing silencer generated by DMD exon 45 deletion junction could explain upstream exon 44 skipping that modifies dystrophinopathy
Q64122110A sequence-based, deep learning model accurately predicts RNA splicing branchpoints
Q34660002A simple model to explain evolutionary trends of eukaryotic gene architecture and expression: how competition between splicing and cleavage/polyadenylation factors may affect gene expression and splice-site recognition in eukaryotes
Q46190644Association of intronic repetition of SLC26A4 gene with Hashimoto thyroiditis disease
Q36418605Cotranscriptional splicing efficiency differs dramatically between Drosophila and mouse
Q40954072Exploring the Impact of Cleavage and Polyadenylation Factors on Pre-mRNA Splicing Across Eukaryotes.
Q42710864Expression-Linked Patterns of Codon Usage, Amino Acid Frequency, and Protein Length in the Basally Branching Arthropod Parasteatoda tepidariorum
Q34847677Identification and characterization of a novel promoter for the human ANO1 gene regulated by the transcription factor signal transducer and activator of transcription 6 (STAT6)
Q39327857Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments
Q35682198On the path to genetic novelties: insights from programmed DNA elimination and RNA splicing
Q40051947Rapid Evolution of Ovarian-Biased Genes in the Yellow Fever Mosquito (Aedes aegypti).
Q92772490Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome
Q39388492Selection on Position of Nonsense Codons in Introns
Q41033272The dynamic loss and gain of introns during the evolution of the Brassicaceae
Q47244412The kinetics of pre-mRNA splicing in the Drosophila genome and the influence of gene architecture.
Q47785565Transcription-Associated Compositional Skews in Drosophila Genes
Q36016026mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

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