A complementary bioinformatics approach to identify potential plant cell wall glycosyltransferase-encoding genes

scientific article

A complementary bioinformatics approach to identify potential plant cell wall glycosyltransferase-encoding genes is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1104/PP.104.042978
P932PMC publication ID523326
P698PubMed publication ID15333752
P5875ResearchGate publication ID8378137

P50authorPeter UlvskovQ37624323
Bent Larsen PetersenQ44582697
P2093author name stringMichael Skjøt
Jack Egelund
Naomi Geshi
P2860cites workThe CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis toolsQ24248165
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Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogsQ27629547
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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomesQ27860838
Activity of the yeast MNN1 alpha-1,3-mannosyltransferase requires a motif conserved in many other families of glycosyltransferasesQ27935328
The components of the Saccharomyces cerevisiae mannosyltransferase complex M-Pol I have distinct functions in mannan synthesisQ27939308
Identification and characterization of large galactosyltransferase gene families: galactosyltransferases for all functionsQ28139075
An evolving hierarchical family classification for glycosyltransferasesQ28190475
SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignmentsQ28212954
The catalytic site of the pectin biosynthetic enzyme alpha-1,4-galacturonosyltransferase is located in the lumen of the GolgiQ28351757
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structureQ29547343
Enhanced genome annotation using structural profiles in the program 3D-PSSMQ29547847
GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequencesQ29620735
Combining fold recognition and exploratory data analysis for searching for glycosyltransferases in the genome of Mycobacterium tuberculosisQ30880887
Characterization of a gene which encodes a mannosyltransferase homolog of Paracoccidioides brasiliensisQ33184177
A pectin glucuronyltransferase gene is essential for intercellular attachment in the plant meristemQ33337909
Machine learning approaches for the prediction of signal peptides and other protein sorting signalsQ33538324
Modifications of cellulose synthase confer resistance to isoxaben and thiazolidinone herbicides in Arabidopsis Ixr1 mutantsQ33942953
An Arabidopsis gene encoding an alpha-xylosyltransferase involved in xyloglucan biosynthesisQ34065678
A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana.Q34091034
Pectins: structure, biosynthesis, and oligogalacturonide-related signalingQ34291904
Structural and functional features of glycosyltransferasesQ34351314
Biosynthesis of the arabinogalactan-peptidoglycan complex of Mycobacterium tuberculosisQ34368680
Glycoside hydrolases and glycosyltransferases: families and functional modulesQ34489525
Remarkable structural similarities between diverse glycosyltransferasesQ35033333
STRUCTURE AND BIOGENESIS OF THE CELL WALLS OF GRASSES.Q35687284
A cytoplasmic protein, NfrC, is required for bacteriophage N4 adsorptionQ36123543
Relaxation in a high-stress environment: the molecular bases of extensible cell walls and cell enlargementQ41560532
Arabinan synthase and xylan synthase activities of Phaseolus vulgaris. Subcellular localization and possible mechanism of actionQ41829070
Predicting the topology of transmembrane helical proteins using mean burial propensity and a hidden-Markov-model-based methodQ43152756
QUASIMODO1 encodes a putative membrane-bound glycosyltransferase required for normal pectin synthesis and cell adhesion in ArabidopsisQ44170759
Biosynthesis of UDP-xylose. Cloning and characterization of a novel Arabidopsis gene family, UXS, encoding soluble and putative membrane-bound UDP-glucuronic acid decarboxylase isoformsQ44248376
The MUR3 gene of Arabidopsis encodes a xyloglucan galactosyltransferase that is evolutionarily related to animal exostosins.Q44499540
Subcellular localization and topology of beta(1-->4)galactosyltransferase that elongates beta(1-->4)galactan side chains in rhamnogalacturonan I in potatoQ44678018
Improvement of the GenTHREADER method for genomic fold recognitionQ45145874
ARAMEMNON, a novel database for Arabidopsis integral membrane proteinsQ45339655
Molecular characterisation of a membrane-bound galactosyltransferase of plant cell wall matrix polysaccharide biosynthesisQ47907693
Adaptation and growth of tomato cells on the herbicide 2,6-dichlorobenzonitrile leads to production of unique cell walls virtually lacking a cellulose-xyloglucan networkQ47920770
Xyloglucan fucosyltransferase, an enzyme involved in plant cell wall biosynthesisQ47955365
Sequence-function relationships of prokaryotic and eukaryotic galactosyltransferasesQ48034312
Functional compartmentation of the Golgi apparatus of plant cells : immunocytochemical analysis of high-pressure frozen- and freeze-substituted sycamore maple suspension culture cells.Q52230719
Molecular biology of the plant cell wall: searching for the genes that define structure, architecture and dynamicsQ74506437
Phase Separation of Plant Cell Wall Polysaccharides and Its Implications for Cell Wall AssemblyQ74770491
Cell wall modifications of bean (Phaseolus vulgaris) cell suspensions during habituation and dehabituation to dichlobenilQ77793289
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectbioinformaticsQ128570
cell wallQ128700
P304page(s)2609-2620
P577publication date2004-08-27
P1433published inPlant PhysiologyQ3906288
P1476titleA complementary bioinformatics approach to identify potential plant cell wall glycosyltransferase-encoding genes
P478volume136

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