| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Robert Landick | Q88156402 |
| Alex Harwig | Q42431799 | ||
| P2093 | author name string | Ben Berkhout | |
| P2860 | cites work | The basal initiation machinery: beyond the general transcription factors | Q37467909 |
| Genetic conflicts: the usual suspects and beyond | Q37612803 | ||
| Identification of novel, highly expressed retroviral microRNAs in cells infected by bovine foamy virus | Q37713953 | ||
| Conventional and unconventional mechanisms for capping viral mRNA. | Q37964471 | ||
| Sensing of RNA viruses: a review of innate immune receptors involved in recognizing RNA virus invasion | Q37976964 | ||
| Regulation of flavivirus RNA synthesis and capping | Q38127643 | ||
| Cytoplasmic RNA: a case of the tail wagging the dog. | Q38132667 | ||
| Flavivirus RNA methylation | Q38184248 | ||
| Poly(A)-binding proteins: structure, domain organization, and activity regulation | Q38184594 | ||
| Retroviral microRNAs | Q38207408 | ||
| Regulation of Flavivirus RNA synthesis and replication | Q38280934 | ||
| The HIV-1 Tat protein has a versatile role in activating viral transcription | Q38286131 | ||
| HIV-1 core promoter lacks a simple initiator element but contains a bipartite activator at the transcription start site. | Q38317454 | ||
| Structural basis of transcription initiation by RNA polymerase II. | Q38360498 | ||
| Deep sequencing reveals the eight facets of the influenza A/HongKong/1/1968 (H3N2) virus cap-snatching process | Q38473543 | ||
| Mechanisms of HIV-1 Control | Q38688274 | ||
| Viral Nucleases Induce an mRNA Degradation-Transcription Feedback Loop in Mammalian Cells | Q38849238 | ||
| Sequencing the cap-snatching repertoire of H1N1 influenza provides insight into the mechanism of viral transcription initiation. | Q38883679 | ||
| Function and control of RNA polymerase II C-terminal domain phosphorylation in vertebrate transcription and RNA processing | Q39002232 | ||
| Paleovirology--modern consequences of ancient viruses | Q21092724 | ||
| Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNA | Q21266670 | ||
| Long noncoding RNA as modular scaffold of histone modification complexes | Q22065890 | ||
| Functional RNA elements in the dengue virus genome | Q22336970 | ||
| Structure and function of a human transcription factor TFIIIB subunit that is evolutionarily conserved and contains both TFIIB- and high-mobility-group protein 2-related domains | Q24320187 | ||
| A human immunodeficiency virus type 1 Tat-like arginine-rich RNA-binding domain is essential for HEXIM1 to inhibit RNA polymerase II transcription through 7SK snRNA-mediated inactivation of P-TEFb | Q24561968 | ||
| An atlas of the Epstein-Barr virus transcriptome and epigenome reveals host-virus regulatory interactions | Q24614360 | ||
| Specific NF-kappa B subunits act in concert with Tat to stimulate human immunodeficiency virus type 1 transcription | Q24645001 | ||
| Functional roles for the TATA promoter and enhancers in basal and Tat-induced expression of the human immunodeficiency virus type 1 long terminal repeat | Q24655684 | ||
| MAQ1 and 7SK RNA interact with CDK9/cyclin T complexes in a transcription-dependent manner | Q24679741 | ||
| A reevaluation of the higher taxonomy of viruses based on RNA polymerases | Q24681318 | ||
| The yin and yang of hepatitis C: synthesis and decay of hepatitis C virus RNA | Q26800446 | ||
| Initiation and regulation of paramyxovirus transcription and replication | Q26851684 | ||
| Promoter clearance by RNA polymerase II | Q27012720 | ||
| Virus meets host microRNA: the destroyer, the booster, the hijacker | Q27028188 | ||
| Crystal structure of the RNA-dependent RNA polymerase from influenza C virus | Q27315161 | ||
| Template/primer requirements and single nucleotide incorporation by hepatitis C virus nonstructural protein 5B polymerase | Q27469313 | ||
| Essential role of cyclization sequences in flavivirus RNA replication | Q27469848 | ||
| West Nile Virus 5'-Cap Structure Is Formed by Sequential Guanine N-7 and Ribose 2'-O Methylations by Nonstructural Protein 5 | Q27477465 | ||
| Crystal Structure of the Dengue Virus RNA-Dependent RNA Polymerase Catalytic Domain at 1.85-Angstrom Resolution | Q27480349 | ||
| The flavivirus NS5 protein is a true RNA guanylyltransferase that catalyzes a two-step reaction to form the RNA cap structure | Q27490412 | ||
| Crystal structure of a nucleocapsid-like nucleoprotein-RNA complex of respiratory syncytial virus | Q27658455 | ||
| Crystal structure of a KSHV-SOX-DNA complex: insights into the molecular mechanisms underlying DNase activity and host shutoff | Q27667301 | ||
| Structure and Functional Analysis of the RNA- and Viral Phosphoprotein-Binding Domain of Respiratory Syncytial Virus M2-1 Protein | Q27679531 | ||
| Structural insight into cap-snatching and RNA synthesis by influenza polymerase | Q27696194 | ||
| Transcription initiation complex structures elucidate DNA opening | Q27704895 | ||
| 7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes | Q28116607 | ||
| DSIF and NELF interact with RNA polymerase II elongation complex and HIV-1 Tat stimulates P-TEFb-mediated phosphorylation of RNA polymerase II and DSIF during transcription elongation | Q28139929 | ||
| RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA. | Q54564102 | ||
| The biochemistry of polyadenylation | Q71392048 | ||
| DNA melting on yeast RNA polymerase II promoters | Q72858710 | ||
| Transcriptional activities of reovirus RNA polymerase in recoated cores. Initiation and elongation are regulated by separate mechanisms | Q73010776 | ||
| Single-molecule FRET reveals the pre-initiation and initiation conformations of influenza virus promoter RNA. | Q39330639 | ||
| Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G. | Q39590547 | ||
| Polyadenylation of influenza virus mRNA transcribed in vitro from model virion RNA templates: requirement for 5' conserved sequences | Q39642306 | ||
| Tat-dependent production of an HIV-1 TAR-encoded miRNA-like small RNA. | Q39914513 | ||
| Mammalian NET-Seq Reveals Genome-wide Nascent Transcription Coupled to RNA Processing | Q39983735 | ||
| Architecture of an RNA polymerase II transcription pre-initiation complex | Q40082603 | ||
| Co-option of an endogenous retrovirus envelope for host defense in hominid ancestors. | Q40248585 | ||
| An in vitro fluorescence based study of initiation of RNA synthesis by influenza B polymerase | Q40362747 | ||
| Unconventional mechanism of mRNA capping by the RNA-dependent RNA polymerase of vesicular stomatitis virus. | Q40460335 | ||
| Expression, purification, and characterization of the RNA 5'-triphosphatase activity of dengue virus type 2 nonstructural protein 3. | Q40577122 | ||
| Lytic KSHV infection inhibits host gene expression by accelerating global mRNA turnover | Q40578287 | ||
| RNA-Free and Ribonucleoprotein-Associated Influenza Virus Polymerases Directly Bind the Serine-5-Phosphorylated Carboxyl-Terminal Domain of Host RNA Polymerase II. | Q40705551 | ||
| Sequence comparison of five polymerases (L proteins) of unsegmented negative-strand RNA viruses: theoretical assignment of functional domains | Q41193373 | ||
| The novel influenza A virus protein PA-X and its naturally deleted variant show different enzymatic properties in comparison to the viral endonuclease PA. | Q41347441 | ||
| The respiratory syncytial virus M2-1 protein forms tetramers and interacts with RNA and P in a competitive manner | Q41361265 | ||
| EBV noncoding RNA binds nascent RNA to drive host PAX5 to viral DNA. | Q41464136 | ||
| RNA-mediated displacement of an inhibitory snRNP complex activates transcription elongation | Q42027880 | ||
| Elongation-Competent Pauses Govern the Fidelity of a Viral RNA-Dependent RNA Polymerase | Q42164522 | ||
| Structure of influenza A polymerase bound to the viral RNA promoter | Q42181164 | ||
| A common strategy for host RNA degradation by divergent viruses | Q42270342 | ||
| The TAR hairpin of human immunodeficiency virus type 1 can be deleted when not required for Tat-mediated activation of transcription | Q42431758 | ||
| Mechanism of RNA synthesis initiation by the vesicular stomatitis virus polymerase | Q42591165 | ||
| The influenza virus NS1 protein binds to a specific region in human U6 snRNA and inhibits U6-U2 and U6-U4 snRNA interactions during splicing | Q43205509 | ||
| Roles of RNA:DNA hybrid stability, RNA structure, and active site conformation in pausing by human RNA polymerase II. | Q44575434 | ||
| Transcriptional pausing at +62 of the HIV-1 nascent RNA modulates formation of the TAR RNA structure | Q44786579 | ||
| Effect of actinomycin D on cellular nucleic acid synthesis and virus production | Q45718082 | ||
| Tat trans-activates the human immunodeficiency virus through a nascent RNA target | Q45847022 | ||
| Covalently closed circular duplex DNA of Epstein-Barr virus in a human lymphoid cell line | Q45893613 | ||
| Activation of the AIDS retrovirus promoter by the cellular transcription factor, Sp1. | Q48365300 | ||
| Control of gene expression through regulation of the TATA-binding protein | Q28145475 | ||
| The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription | Q28206012 | ||
| De novo initiation of viral RNA-dependent RNA synthesis | Q28214923 | ||
| Regulation of microRNA biogenesis | Q28243976 | ||
| Identification of a cyclin T-binding domain in Hexim1 and biochemical analysis of its binding competition with HIV-1 Tat | Q28247078 | ||
| Assembly, purification, and pre-steady-state kinetic analysis of active RNA-dependent RNA polymerase elongation complex | Q28258867 | ||
| Tentative identification of RNA-dependent RNA polymerases of dsRNA viruses and their relationship to positive strand RNA viral polymerases | Q28278298 | ||
| Structure of eukaryotic RNA polymerases | Q28284822 | ||
| Host control of HIV-1 parasitism in T cells by the nuclear factor of activated T cells | Q28290885 | ||
| Evolutionary genomics of nucleo-cytoplasmic large DNA viruses | Q28298692 | ||
| Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation | Q28303864 | ||
| The respiratory syncytial virus polymerase has multiple RNA synthesis activities at the promoter | Q28484478 | ||
| DNA-binding specificities of human transcription factors | Q28854562 | ||
| Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans | Q29394946 | ||
| Transcription termination by nuclear RNA polymerases | Q29541446 | ||
| Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome | Q29547359 | ||
| Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product | Q29615049 | ||
| Epstein-Barr virus: 40 years on | Q29617969 | ||
| An inducible transcription factor activates expression of human immunodeficiency virus in T cells | Q29618434 | ||
| Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis | Q29619821 | ||
| Epstein-Barr virus noncoding RNAs are confined to the nucleus, whereas their partner, the human La protein, undergoes nucleocytoplasmic shuttling | Q30444219 | ||
| Structural insights into transcription initiation by RNA polymerase II. | Q30558096 | ||
| Influenza virus RNA polymerase: insights into the mechanisms of viral RNA synthesis | Q30791826 | ||
| Controlling cellular P-TEFb activity by the HIV-1 transcriptional transactivator Tat | Q33728518 | ||
| A pause sequence enriched at translation start sites drives transcription dynamics in vivo | Q33939698 | ||
| Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA. | Q33949741 | ||
| Control of transcriptional elongation | Q34038245 | ||
| Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1. | Q34064226 | ||
| Viral-encoded enzymes that target host chromatin functions | Q34073129 | ||
| A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness | Q34131956 | ||
| Characterization of a vaccinia virus mutant with a deletion of the D10R gene encoding a putative negative regulator of gene expression | Q34301810 | ||
| A four-nucleotide translation enhancer in the 3'-terminal consensus sequence of the nonpolyadenylated mRNAs of rotavirus | Q34362708 | ||
| Human T-Lymphotropic Virus Type 1 Tax Protein Complexes with P-TEFb and Competes for Brd4 and 7SK snRNP/HEXIM1 Binding | Q34416436 | ||
| Molecular basis for nucleotide conservation at the ends of the dengue virus genome. | Q34426452 | ||
| RNA Function. RNA and dynamic nuclear organization | Q34438182 | ||
| Uridylation by TUT4 and TUT7 marks mRNA for degradation | Q34452309 | ||
| The general transcription machinery and general cofactors | Q34549899 | ||
| Herpes simplex virus-infected cells contain a function(s) that destabilizes both host and viral mRNAs | Q34608970 | ||
| Tax interacts with P-TEFb in a novel manner to stimulate human T-lymphotropic virus type 1 transcription | Q34647848 | ||
| Characterization of a second vaccinia virus mRNA-decapping enzyme conserved in poxviruses | Q34690881 | ||
| Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation | Q35036515 | ||
| Viral noncoding RNAs: more surprises | Q35228726 | ||
| Vaccinia virus D10 protein has mRNA decapping activity, providing a mechanism for control of host and viral gene expression | Q35628538 | ||
| RNA virus microRNA that mimics a B-cell oncomiR. | Q35779129 | ||
| Tat competes with HEXIM1 to increase the active pool of P-TEFb for HIV-1 transcription. | Q35804608 | ||
| Transcription and replication of nonsegmented negative-strand RNA viruses. | Q35857617 | ||
| Analysis of the gene start and gene end signals of human respiratory syncytial virus: quasi-templated initiation at position 1 of the encoded mRNA. | Q35887622 | ||
| Selective Degradation of Host RNA Polymerase II Transcripts by Influenza A Virus PA-X Host Shutoff Protein. | Q35915706 | ||
| Epstein Barr virus-associated tumours: an update for the attention of the working pathologist | Q36172481 | ||
| Influenza A virus preferentially snatches noncoding RNA caps | Q36286466 | ||
| Evolutionary conservation of the PA-X open reading frame in segment 3 of influenza A virus | Q36363892 | ||
| Ribosomal frameshifting used in influenza A virus expression occurs within the sequence UCC_UUU_CGU and is in the +1 direction | Q36401203 | ||
| Noncoding RNA-guided recruitment of transcription factors: A prevalent but undocumented mechanism? | Q36487117 | ||
| An overlapping protein-coding region in influenza A virus segment 3 modulates the host response | Q36554219 | ||
| Respiratory syncytial virus polymerase can initiate transcription from position 3 of the leader promoter | Q36667810 | ||
| Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII. | Q36679818 | ||
| EBV noncoding RNA EBER2 interacts with host RNA-binding proteins to regulate viral gene expression | Q36742748 | ||
| Herpes simplex virus mutants defective in the virion-associated shutoff of host polypeptide synthesis and exhibiting abnormal synthesis of alpha (immediate early) viral polypeptides | Q36905949 | ||
| Human immunodeficiency virus type 1 subtypes have a distinct long terminal repeat that determines the replication rate in a host-cell-specific manner | Q37011027 | ||
| Negative elongation factor (NELF) coordinates RNA polymerase II pausing, premature termination, and chromatin remodeling to regulate HIV transcription | Q37151045 | ||
| Cracking the RNA polymerase II CTD code | Q37155088 | ||
| Laboratory assays for Epstein-Barr virus-related disease | Q37192117 | ||
| Host shutoff is a conserved phenotype of gammaherpesvirus infection and is orchestrated exclusively from the cytoplasm | Q37333940 | ||
| Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals | Q37352913 | ||
| A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein | Q37442279 | ||
| P275 | copyright license | Creative Commons Attribution | Q6905323 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 10 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | virus | Q808 |
| transcription | Q177900 | ||
| regulation of gene expression | Q411391 | ||
| viral RNA | Q27108123 | ||
| host microbial interaction | Q68260314 | ||
| viral gene expression regulation | Q70682269 | ||
| P577 | publication date | 2017-10-21 | |
| P1433 | published in | Viruses | Q7935305 |
| P1476 | title | The Battle of RNA Synthesis: Virus versus Host | |
| P478 | volume | 9 |
| Q58749402 | Deconvolution of pro- and antiviral genomic responses in Zika virus-infected and bystander macrophages |
| Q54977170 | Role of MAPK/MNK1 signaling in virus replication. |
| Q114370821 | Rotaviral nonstructural protein 5 (NSP5) promotes proteasomal degradation of up-frameshift protein 1 (UPF1), a principal mediator of nonsense-mediated mRNA decay (NMD) pathway, to facilitate infection |
| Q94547327 | SARS-CoV-2 RNA polymerase as target for antiviral therapy |
| Q56556115 | The adaptation of codon usage of +ssRNA viruses to their hosts |
| Q89561652 | Trafficking of siRNA precursors by the dsRBD protein Blanks in Drosophila |
| Q59354894 | Unconventional RNA-binding proteins step into the virus-host battlefront |
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