Can simple codon pair usage predict protein-protein interaction?

scientific article published on 5 March 2012

Can simple codon pair usage predict protein-protein interaction? is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1039/C2MB05427B
P698PubMed publication ID22392100
P5875ResearchGate publication ID221889707

P50authorZiding ZhangQ37381054
Fei HeQ41046282
P2093author name stringYuan Zhou
Jiangning Song
Ying-Si Zhou
P2860cites workCentral Dogma of Molecular BiologyQ22122430
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Deciphering the Arabidopsis floral transition process by integrating a protein-protein interaction network and gene expression dataQ30000964
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Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotationsQ33241224
The prediction of protein-protein interaction networks in rice blast fungusQ33381886
A top-down approach to infer and compare domain-domain interactions across eight model organismsQ33424520
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iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutionsQ33844563
Nonrandom utilization of codon pairs in Escherichia coliQ33857615
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Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".Q35037874
Coevolution of gene expression among interacting proteinsQ35323681
Predicting protein-protein interactions based only on sequences informationQ35721356
A map of human protein interactions derived from co-expression of human mRNAs and their orthologsQ36663512
Using support vector machine combined with auto covariance to predict protein-protein interactions from protein sequencesQ36676452
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Silent mutations affect in vivo protein folding in Escherichia coliQ38288412
Sequence-based prediction of protein-protein interactions by means of codon usage.Q39625557
Critical assessment of sequence-based protein-protein interaction prediction methods that do not require homologous protein sequencesQ39920083
Selection of aminoacyl-tRNAs at sense codons: the size of the tRNA variable loop determines whether the immediate 3' nucleotide to the codon has a context effectQ40396315
Codon catalog usage is a genome strategy modulated for gene expressivityQ40495447
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Coevolution of codon usage and transfer RNA abundanceQ43851327
Simple sequence-based kernels do not predict protein-protein interactionsQ44130078
Codon pair utilization biases influence translational elongation step timesQ46515085
Predicting protein-protein interactions from sequence using correlation coefficient and high-quality interaction datasetQ47958786
Refined phylogenetic profiles method for predicting protein-protein interactionsQ48485695
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The "+70 pause": hypothesis of a translational control of membrane protein assembly.Q54580621
Probabilistic model of the human protein-protein interaction networkQ58482561
P433issue5
P921main subjectprotein-protein interactionQ896177
P304page(s)1396-1404
P577publication date2012-03-05
P1433published inMolecular BioSystemsQ3319467
P1476titleCan simple codon pair usage predict protein-protein interaction?
P478volume8

Reverse relations

cites work (P2860)
Q47186560Accurate discrimination of outer membrane proteins using secondary structure element alignment and support vector machine
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