Phylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes.

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Phylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes. is …
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P356DOI10.1016/J.YDBIO.2005.02.014
P698PubMed publication ID15893974
P5875ResearchGate publication ID7847375

P2093author name stringQiandong Zeng
Ken W Y Cho
Souichi Ogata
Tadayoshi Hayata
Daniel A Peiffer
Andreas von Bubnoff
Ira L Blitz
Matthew Trunnell
P2860cites workA Dominant Negative Bone Morphogenetic Protein 4 Receptor Causes Neuralization in Xenopus EctodermQ71880118
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A simple molecular complex mediates widespread BMP-induced repression during Drosophila development.Q40528171
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A BMP-inducible gene, dlx5, regulates osteoblast differentiation and mesoderm inductionQ42818472
Bone morphogenetic protein-2 promotes osteoblast apoptosis through a Smad-independent, protein kinase C-dependent signaling pathwayQ43632099
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Disruption of BMP signals in embryonic Xenopus ectoderm leads to direct neural inductionQ44507413
Twisted gastrulation loss-of-function analyses support its role as a BMP inhibitor during early Xenopus embryogenesisQ44571640
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A Xenopus DNA microarray approach to identify novel direct BMP target genes involved in early embryonic developmentQ45198335
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Mef2c is a direct transcriptional target of ISL1 and GATA factors in the anterior heart field during mouse embryonic developmentQ46350581
Cardiac-specific activity of an Nkx2-5 enhancer requires an evolutionarily conserved Smad binding siteQ47616447
Xenopus Xsal-1, a vertebrate homolog of the region specific homeotic gene spalt of DrosophilaQ48065869
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Functional analysis of chicken Sox2 enhancers highlights an array of diverse regulatory elements that are conserved in mammalsQ48251434
Id gene activity during Xenopus embryogenesisQ49059565
XSIP1 is essential for early neural gene expression and neural differentiation by suppression of BMP signaling.Q52087092
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The dorsalizing and neural inducing gene follistatin is an antagonist of BMP-4.Q52195355
Direct and long-range action of a DPP morphogen gradient.Q52201537
Induction of epidermis and inhibition of neural fate by Bmp-4Q52508863
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OAZ uses distinct DNA- and protein-binding zinc fingers in separate BMP-Smad and Olf signaling pathwaysQ22011195
Initial sequencing and comparative analysis of the mouse genomeQ22122521
DACH1 inhibits transforming growth factor-beta signaling through binding Smad4Q24296908
Smad3 and Smad4 cooperate with c-Jun/c-Fos to mediate TGF-beta-induced transcriptionQ24311810
Specificity in transforming growth factor beta-induced transcription of the plasminogen activator inhibitor-1 gene: interactions of promoter DNA, transcription factor muE3, and Smad proteinsQ24652300
Crystal structure of a Smad MH1 domain bound to DNA: insights on DNA binding in TGF-beta signalingQ27765346
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Mechanisms of TGF-beta signaling from cell membrane to the nucleusQ27860785
Negative regulation of BMP/Smad signaling by Tob in osteoblastsQ28143428
Analysis of vertebrate SCL loci identifies conserved enhancersQ28143951
Identification and functional characterization of distinct critically important bone morphogenetic protein-specific response elements in the Id1 promoterQ28208212
Scanning Human Gene Deserts for Long-Range EnhancersQ28210571
Ventral mesodermal patterning in Xenopus embryos: expression patterns and activities of BMP-2 and BMP-4Q28288976
The role of a Williams-Beuren syndrome-associated helix-loop-helix domain-containing transcription factor in activin/nodal signalingQ28508789
Id genes are direct targets of bone morphogenetic protein induction in embryonic stem cellsQ28587724
VISTA : visualizing global DNA sequence alignments of arbitrary lengthQ29614270
Firefly luciferase gene: structure and expression in mammalian cellsQ29616519
Appendix G: In Situ Hybridization: An Improved Whole-Mount Method for Xenopus EmbryosQ29620084
A transcriptional partner for MAD proteins in TGF-beta signallingQ29622823
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectphylogeneticsQ171184
P304page(s)210-226
P577publication date2005-05-01
P1433published inDevelopmental BiologyQ3025402
P1476titlePhylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes.
P478volume281