| scholarly article | Q13442814 |
| P50 | author | David Mindell | Q28153987 |
| P2860 | cites work | Darwin's Theory of Descent with Modification, versus the Biblical Tree of Life | Q21092715 |
| Viruses take center stage in cellular evolution | Q21184144 | ||
| Trees and networks before and after Darwin | Q21203754 | ||
| Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation | Q21203782 | ||
| Do orthologous gene phylogenies really support tree-thinking? | Q21283968 | ||
| On universal common ancestry, sequence similarity, and phylogenetic structure: the sins of P-values and the virtues of Bayesian evidence | Q22065293 | ||
| Massive Horizontal Gene Transfer in Bdelloid Rotifers | Q22065861 | ||
| Pattern pluralism and the Tree of Life hypothesis | Q22066333 | ||
| Horizontal gene transfer in eukaryotic evolution | Q22122009 | ||
| Was the universal common ancestry proved? | Q22122188 | ||
| A formal test of the theory of universal common ancestry | Q22122190 | ||
| Defining life: the virus viewpoint | Q22240835 | ||
| Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus | Q24535805 | ||
| Hybridization, ecological races and the nature of species: empirical evidence for the ease of speciation | Q24642021 | ||
| The universal ancestor | Q24655363 | ||
| Dating of the human-ape splitting by a molecular clock of mitochondrial DNA | Q27860908 | ||
| Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation | Q28269158 | ||
| Supertrees disentangle the chimerical origin of eukaryotic genomes | Q28302466 | ||
| Recombination and the nature of bacterial speciation | Q36719090 | ||
| Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution | Q36775488 | ||
| The prokaryotic tree of life: past, present... and future? | Q37119483 | ||
| Phylogenetic inference using whole genomes | Q37259665 | ||
| Prokaryotic evolution and the tree of life are two different things | Q37385941 | ||
| Viruses are essential agents within the roots and stem of the tree of life | Q37615579 | ||
| Evolutionary implications of horizontal gene transfer | Q38039144 | ||
| Proving universal common ancestry with similar sequences | Q38118318 | ||
| HYBRIDS AND PHYLOGENETIC SYSTEMATICS II. THE IMPACT OF HYBRIDS ON CLADISTIC ANALYSIS. | Q38751641 | ||
| HYBRIDS AND PHYLOGENETIC SYSTEMATICS I. PATTERNS OF CHARACTER EXPRESSION IN HYBRIDS AND THEIR IMPLICATIONS FOR CLADISTIC ANALYSIS. | Q38753576 | ||
| Towards an accurate identification of mosaic genes and partial horizontal gene transfers | Q39889130 | ||
| Species trees from highly incongruent gene trees in rice. | Q51629189 | ||
| Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: a model. | Q51862106 | ||
| Bayesian estimation of concordance among gene trees. | Q51929061 | ||
| Homology evolving | Q54186019 | ||
| Revisiting the concept of lineage in prokaryotes: a phylogenetic perspective. | Q54307798 | ||
| Which is the most conserved group of proteins? Homology-orthology, paralogy, xenology, and the fusion of independent lineages. | Q54625126 | ||
| Phylogenetic Species, Nested Hierarchies, and Character Fixation | Q54801232 | ||
| Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms. | Q55042455 | ||
| How stands the Tree of Life a century and a half after The Origin? | Q28741299 | ||
| The common ancestry of life | Q28744591 | ||
| The network of life: genome beginnings and evolution. Introduction | Q28752004 | ||
| The Apicomplexan whole-genome phylogeny: an analysis of incongruence among gene trees | Q28756552 | ||
| Augustin Augier's "Arbre Botanique" (1801), a Remarkable Early Botanical Representation of the Natural System | Q28955479 | ||
| Widespread Discordance of Gene Trees with Species Tree in Drosophila: Evidence for Incomplete Lineage Sorting | Q29037546 | ||
| Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods | Q29547744 | ||
| Phylogenetic classification and the universal tree | Q29547749 | ||
| Gene tree discordance, phylogenetic inference and the multispecies coalescent | Q29614318 | ||
| Is a new and general theory of molecular systematics emerging? | Q29614319 | ||
| Stalking the fourth domain in metagenomic data: searching for, discovering, and interpreting novel, deep branches in marker gene phylogenetic trees | Q30000954 | ||
| Homology a personal view on some of the problems | Q30011139 | ||
| Origin and evolution of the mitochondrial proteome | Q30975353 | ||
| Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment | Q33233710 | ||
| The role of laterally transferred genes in adaptive evolution | Q33272853 | ||
| Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study | Q33304438 | ||
| Coalescent methods for estimating phylogenetic trees | Q33462194 | ||
| Gene transfer and diversification of microbial eukaryotes | Q33477944 | ||
| The role of hybridization in plant speciation | Q33477947 | ||
| Search for a 'Tree of Life' in the thicket of the phylogenetic forest | Q33481340 | ||
| Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant viruses | Q33769577 | ||
| Rapid evolutionary innovation during an Archaean genetic expansion. | Q33775414 | ||
| Informational gene phylogenies do not support a fourth domain of life for nucleocytoplasmic large DNA viruses | Q33940838 | ||
| Edward Hitchcock's pre-Darwinian (1840) "tree of life". | Q34089439 | ||
| Inferring and validating horizontal gene transfer events using bipartition dissimilarity | Q34119199 | ||
| Why do RNA viruses recombine? | Q34197204 | ||
| More barrels from the viral tree of life | Q34248362 | ||
| Phylogenetic consequences of symbioses: Eukarya and Eubacteria are not monophyletic taxa | Q34252706 | ||
| Genome mosaicism and organismal lineages. | Q34316533 | ||
| Stochastic models for horizontal gene transfer: taking a random walk through tree space | Q34573331 | ||
| Confounding factors in HGT detection: statistical error, coalescent effects, and multiple solutions | Q34637934 | ||
| A model of horizontal gene transfer and the bacterial phylogeny problem | Q34657250 | ||
| Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata). | Q34742810 | ||
| Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sorting | Q35198574 | ||
| A rooted net of life. | Q35290567 | ||
| P433 | issue | 3 | |
| P304 | page(s) | 479-489 | |
| P577 | publication date | 2013-01-03 | |
| P1433 | published in | Systematic Biology | Q7663761 |
| P1476 | title | The tree of life: metaphor, model, and heuristic device | |
| P478 | volume | 62 |
| Q89995041 | A User's Guide to Metaphors In Ecology and Evolution |
| Q26849279 | Evolutionary change and phylogenetic relationships in light of horizontal gene transfer |
| Q36238766 | Horizontal gene transfer drives the evolution of Rh50 permeases in prokaryotes |
| Q36744616 | How reticulated are species? |
| Q28276251 | Impact of genomics on the understanding of microbial evolution and classification: the importance of Darwin's views on classification |
| Q39790156 | Inconsistency of Species Tree Methods under Gene Flow. |
| Q96175634 | Life and works of Augustin Augier de Favas (1758–1825), author of “Arbre botanique” (1801) |
| Q42696708 | PhyloNetworks: a package for phylogenetic networks |
| Q36183621 | Phylogeny mandalas for illustrating the Tree of Life |
| Q52327438 | Speciation in the presence of gene flow: population genomics of closely related and diverging Eucalyptus species. |
| Q92921538 | The Potyviruses: An Evolutionary Synthesis Is Emerging |
| Q26748233 | What Is the Tree of Life? |
| Q39080836 | Xenolog classification |
Search more.