Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry

scientific article published in September 2002

Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1021/AC0256991
P698PubMed publication ID12349978

P2093author name stringThomas A Shaler
Dirk Chelius
Pavel V Bondarenko
P433issue18
P407language of work or nameEnglishQ1860
P921main subjectliquid chromatography-tandem mass spectrometryQ117788892
liquidQ11435
P304page(s)4741-4749
P577publication date2002-09-01
P1433published inAnalytical ChemistryQ485223
P1476titleIdentification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry
P478volume74

Reverse relations

cites work (P2860)
Q64102059A Review on Quantitative Multiplexed Proteomics
Q34473671A label-free differential quantitative mass spectrometry method for the characterization and identification of protein changes during citrus fruit development.
Q37013235A label-free mass spectrometry method for the quantification of protein isotypes.
Q39859325A label-free quantitative proteomics strategy to identify E3 ubiquitin ligase substrates targeted to proteasome degradation.
Q33888463A posteriori quality control for the curation and reuse of public proteomics data
Q33685804A proteomic study of microgravity cardiac effects: feature maps of label-free LC-MALDI data for differential expression analysis
Q36828359A proteomics view of the molecular mechanisms and biomarkers of glaucomatous neurodegeneration
Q38102548A review on recent developments in mass spectrometry instrumentation and quantitative tools advancing bacterial proteomics
Q30996936A software suite for the generation and comparison of peptide arrays from sets of data collected by liquid chromatography-mass spectrometry
Q36168431Absolute quantification strategies in proteomics based on mass spectrometry.
Q43097813Accurate protein complex retrieval by affinity enrichment mass spectrometry (AE-MS) rather than affinity purification mass spectrometry (AP-MS).
Q31030306Advances in proteomics data analysis and display using an accurate mass and time tag approach.
Q41773275Advantageous uses of mass spectrometry for the quantification of proteins
Q37157865Analysis of organelles within the nervous system: impact on brain and organelle functions
Q35027054Analyzing LC-MS/MS data by spectral count and ion abundance: two case studies
Q35587480Application for proteomic techniques in studying osteoarthritis: a review
Q38056688Application of quantitative proteomics technologies to the biomarker discovery pipeline for multiple sclerosis
Q37015350Biochemical individuality reflected in chromatographic, electrophoretic and mass-spectrometric profiles
Q30950348Bioinformatics meets proteomics--bridging the gap between mass spectrometry data analysis and cell biology
Q33338835Biomarker discovery in psychiatric disorders
Q39032610Building proteomic tool boxes to monitor MHC class I and class II peptides
Q39061545Cell line profiling to improve monoclonal antibody production.
Q57976227Chapter 12 Phosphoproteomics
Q46095722Chapter 8. Proteomic mapping of the vascular endothelium in vivo for vascular targeting
Q37234005Chemical and pathway proteomics: powerful tools for oncology drug discovery and personalized health care.
Q37636378Comparative and Quantitative Global Proteomics Approaches: An Overview
Q37171039Comparative glycoproteomics: approaches and applications
Q46568113Comparison of label-free methods for quantifying human proteins by shotgun proteomics.
Q39494662Comparison of stable-isotope labeling with amino acids in cell culture and spectral counting for relative quantification of protein expression.
Q35180200Comparison of the membrane proteome of virulent Mycobacterium tuberculosis and the attenuated Mycobacterium bovis BCG vaccine strain by label-free quantitative proteomics
Q34145620Computational and statistical analysis of protein mass spectrometry data
Q35009100Correlation of mRNA and protein in complex biological samples.
Q27469058Decoding protein networks during virus entry by quantitative proteomics
Q42729455Deglycosylation and label-free quantitative LC-MALDI MS applied to efficient serum biomarker discovery of lung cancer
Q35098547Development of glycoprotein capture-based label-free method for the high-throughput screening of differential glycoproteins in hepatocellular carcinoma
Q58068992Differential Label-free Quantitative Proteomic Analysis ofShewanella oneidensisCultured under Aerobic and Suboxic Conditions by Accurate Mass and Time Tag Approach
Q38484213Differential label-free quantitative proteomic analysis of avian eggshell matrix and uterine fluid proteins associated with eggshell mechanical property
Q37118484Differential protein expression by Porphyromonas gingivalis in response to secreted epithelial cell components
Q33340658Direct tissue proteomics in human diseases: potential applications to melanoma research
Q37623616Discovery of novel disease-specific and membrane-associated candidate markers in a mouse model of multiple sclerosis
Q28551073Dynamic Proteomic Characteristics and Network Integration Revealing Key Proteins for Two Kernel Tissue Developments in Popcorn
Q36926304Enrichment of distinct microfilament-associated and GTP-binding-proteins in membrane/microvilli fractions from lymphoid cells
Q81698986Evaluation of confidence and reproducibility in quantitative proteomics performed by a capillary isoelectric focusing-based proteomic platform coupled with a spectral counting approach
Q34033015Evaluation of normalization methods on GeLC-MS/MS label-free spectral counting data to correct for variation during proteomic workflows
Q40861137Experimental Null Method to Guide the Development of Technical Procedures and to Control False-Positive Discovery in Quantitative Proteomics
Q37943426From "clinical proteomics" to "clinical chemistry proteomics": considerations using quantitative mass-spectrometry as a model approach
Q36429606Gel-based and gel-free quantitative proteomics approaches at a glance.
Q42226771Generalized Linear and Mixed Models for Label-Free Shotgun Proteomics
Q92631456Global extracellular vesicle proteomic signature defines U87-MG glioma cell hypoxic status with potential implications for non-invasive diagnostics
Q30606993ICan: an optimized ion-current-based quantification procedure with enhanced quantitative accuracy and sensitivity in biomarker discovery
Q33502940IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation
Q46668286Identification of Cultured and Natural Astragalus Root Based on Monosaccharide Mapping.
Q42128121Identification of psoriatic arthritis mediators in synovial fluid by quantitative mass spectrometry
Q37719739Identifying potential therapeutic targets of methicillin-resistant Staphylococcus aureus through in vivo proteomic analysis
Q35477041Impact of data-dependent exclusion list based mass spectrometry on label-free proteomic quantification
Q36022179Improving the TFold test for differential shotgun proteomics.
Q37072898In silico instrumental response correction improves precision of label-free proteomics and accuracy of proteomics-based predictive models.
Q51993191Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry.
Q51073279Integrative quantitation enables a comprehensive proteome comparison of two Mycoplasma pneumoniae genetic perturbations.
Q36594542Keck Foundation Biotechnology Resource Laboratory, Yale University
Q33726556Label-free mass spectrometry-based relative quantification of proteins separated by one-dimensional gel electrophoresis
Q31049038Label-free quantification using MALDI mass spectrometry: considerations and perspectives
Q45876632Label-free quantitative analysis for studying the interactions between nanoparticles and plasma proteins
Q28573249Label-free quantitative analysis of one-dimensional PAGE LC/MS/MS proteome: application on angiotensin II-stimulated smooth muscle cells secretome
Q37829699Less label, more free: approaches in label-free quantitative mass spectrometry.
Q34983181Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects
Q47344805MS Western, a method of multiplexed absolute protein quantification is a practical alternative to Western blotting.
Q39983550Making connections for life: an in vivo map of the yeast interactome
Q37552845Mass Spectrometry-based Proteomics and Peptidomics for Systems Biology and Biomarker Discovery
Q34454989Mass spectrometry based glycoproteomics--from a proteomics perspective
Q37487626Mass spectrometry-based approaches toward absolute quantitative proteomics.
Q37416474Mass spectrometry-based label-free quantitative proteomics
Q36974613Mass spectrometry-based proteomics and peptidomics for biomarker discovery in neurodegenerative diseases
Q64814709Mass spectrometry: A platform for biomarker discovery and validation for Alzheimer's and Parkinson's diseases
Q35118218Measuring the intra-individual variability of the plasma proteome in the chicken model of spontaneous ovarian adenocarcinoma.
Q33260636Merger of laser capture microdissection and mass spectrometry: a window into the amyloid plaque proteome
Q24645983Methods and approaches for the comprehensive characterization and quantification of cellular proteomes using mass spectrometry
Q37727186Mitochondrial proteomics as a selective tool for unraveling Parkinson's disease pathogenesis
Q93111203More than a Toxin: Protein Inventory of Clostridium tetani Toxoid Vaccines
Q36881534Multiple-reaction monitoring-mass spectrometric assays can accurately measure the relative protein abundance in complex mixtures
Q36991397Multiplex proteomics analysis of gender-associated proteins in Brugia malayi
Q34551892Overcoming key technological challenges in using mass spectrometry for mapping cell surfaces in tissues
Q33562617PepC: proteomics software for identifying differentially expressed proteins based on spectral counting
Q34600986Protein analysis by shotgun/bottom-up proteomics
Q37802876Proteomic analysis of zymogen granules.
Q35917830Proteomic informatics
Q37442587Proteomics analysis reveals novel components in the detergent-insoluble subproteome in Alzheimer's disease
Q38748131Proteomics in the Assessment of the Therapeutic Response of Antineoplastic Drugs: Strategies and Practical Applications.
Q91621205Proteomics of diphtheria toxoid vaccines reveals multiple proteins that are immunogenic and may contribute to protection of humans against Corynebacterium diphtheriae
Q37868750Proteomics of extremophiles.
Q21296824Proteomics of plant pathogenic fungi
Q42587063Proteomics of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates
Q36024256Proteomics strategies for protein identification
Q79310635Quantitative analysis of complex peptide mixtures using FTMS and differential mass spectrometry
Q38101159Quantitative analysis of global phosphorylation changes with high-resolution tandem mass spectrometry and stable isotopic labeling
Q38024637Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present
Q35599113Quantitative mass spectrometry of urinary biomarkers
Q34713930Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC)
Q37721307Quantitative neuroproteomics: classical and novel tools for studying neural differentiation and function
Q34339902Quantitative proteomic analysis of ovarian cancer cells identified mitochondrial proteins associated with Paclitaxel resistance.
Q28235630Quantitative proteomic analysis of post-translational modifications of human histones
Q33749585Quantitative secretome and glycome of primary human adipocytes during insulin resistance
Q37036058RIPPER: a framework for MS1 only metabolomics and proteomics label-free relative quantification
Q47130775Ratiometric Mass Spectrometry for Cell Identification and Quantitation Using Intracellular "Dual-Biomarkers".
Q27000073Recent advances in quantitative neuroproteomics
Q90197115Refinements of LC-MS/MS Spectral Counting Statistics Improve Quantification of Low Abundance Proteins
Q36729362Regulation of lipid metabolism by Dicer revealed through SILAC mice
Q37197388Reversible acetylation regulates acetate and propionate metabolism in Mycobacterium smegmatis
Q37607010SILAC surrogates: rescue of quantitative information for orphan analytes in spike-in SILAC experiments
Q36713554Segmentation of precursor mass range using "tiling" approach increases peptide identifications for MS1-based label-free quantification
Q36370962Serum Carbonic Anhydrase 1 is a Biomarker for Diagnosis of Human Schistosoma mansoni Infection
Q38089202Small-molecule affinity chromatography coupled mass spectrometry for drug target deconvolution
Q37398849Stable isotope labeling and label-free proteomics of Drosophila parkin null mutants
Q33926837Stable isotope-free relative and absolute quantitation of protein phosphorylation stoichiometry by MS
Q37569894Stable, reproducible, and automated capillary zone electrophoresis-tandem mass spectrometry system with an electrokinetically pumped sheath-flow nanospray interface
Q30779337Systematic assessment of survey scan and MS2-based abundance strategies for label-free quantitative proteomics using high-resolution MS data.
Q31036432Systematic evaluation of data-independent acquisition for sensitive and reproducible proteomics-a prototype design for a single injection assay.
Q34109658Systems-based analyses of brain regions functionally impacted in Parkinson's disease reveals underlying causal mechanisms
Q33700805Target profiling of a small library of phosphodiesterase 5 (PDE5) inhibitors using chemical proteomics.
Q37318182Targeting and imaging signature caveolar molecules in lungs
Q38030883The application of quantification techniques in proteomics for biomedical research
Q33745481The host targeting motif in exported Plasmodium proteins is cleaved in the parasite endoplasmic reticulum.
Q84561065The pros and cons of peptide-centric proteomics
Q37720601The role of quantitative mass spectrometry in the discovery of pancreatic cancer biomarkers for translational science
Q37056209The utility of biomarker discovery approaches for the detection of disease mechanisms in psychiatric disorders
Q36279053Tissue proteomics using capillary isoelectric focusing-based multidimensional separations
Q37976002To label or not to label: applications of quantitative proteomics in neuroscience research
Q38022563Tools and challenges for diversity-driven proteomics in Brazil.
Q38537236Translational value of liquid chromatography coupled with tandem mass spectrometry-based quantitative proteomics for in vitro-in vivo extrapolation of drug metabolism and transport and considerations in selecting appropriate techniques
Q37866309Understanding and optimizing electrospray ionization techniques for proteomic analysis
Q38256387Utilising proteomic approaches to understand oncogenic human herpesviruses (Review).
Q30382070multiplierz: an extensible API based desktop environment for proteomics data analysis.

Search more.