The SSU processome interactome in Saccharomyces cerevisiae reveals novel protein subcomplexes

scientific article

The SSU processome interactome in Saccharomyces cerevisiae reveals novel protein subcomplexes is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1261/RNA.062927.117
P932PMC publication ID5733573
P698PubMed publication ID29054886

P50authorSusan BasergaQ89940640
P2093author name stringJ Michael Charette
Nicholas G Vincent
P2860cites workA common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNPQ24290525
Toward an understanding of the protein interaction network of the human liverQ24292988
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factorsQ24302526
Dynamic protein-protein interaction wiring of the human spliceosomeQ24306136
Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAsQ24317075
The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinasesQ24319848
Cytoscape: a software environment for integrated models of biomolecular interaction networksQ24515682
Ribosomopathies: Global process, tissue specific defectsQ26781112
Ribosomopathies: how a common root can cause a tree of pathologiesQ26781845
Human diseases of the SSU processomeQ26828592
Processing of preribosomal RNA in Saccharomyces cerevisiaeQ26853246
The small subunit processome in ribosome biogenesis—progress and prospectsQ34559435
Systems biology: Untangling the protein web.Q34992536
The initial U3 snoRNA:pre-rRNA base pairing interaction required for pre-18S rRNA folding revealed by in vivo chemical probingQ35087998
A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA.Q35617284
Determinants of mammalian nucleolar architectureQ35946567
Examining protein protein interactions using endogenously tagged yeast arrays: the cross-and-capture systemQ36177398
Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeastQ36715627
Identifying functional modules in the physical interactome of Saccharomyces cerevisiaeQ36763706
Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunitsQ37228881
Ribosome biogenesis in the yeast Saccharomyces cerevisiaeQ37269766
Molecular architecture of the 90S small subunit pre-ribosomeQ37705614
Chromatin states at ribosomal DNA lociQ38071867
Yeast and human RNA helicases involved in ribosome biogenesis: current status and perspectives.Q38077399
The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA.Q38487234
Integrating the genomic architecture of human nucleolar organizer regions with the biophysical properties of nucleoliQ38788231
Architecture of the yeast small subunit processome.Q39097171
Base pairing between U3 small nucleolar RNA and the 5' end of 18S rRNA is required for pre-rRNA processingQ39447158
UtpA and UtpB chaperone nascent pre-ribosomal RNA and U3 snoRNA to initiate eukaryotic ribosome assemblyQ39647144
Mutational analysis of an essential binding site for the U3 snoRNA in the 5' external transcribed spacer of yeast pre-rRNA.Q40232644
Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.Q40417826
Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis.Q40789290
Small epitope-linker modules for PCR-based C-terminal tagging in Saccharomyces cerevisiaeQ42954136
Interaction network of the ribosome assembly machinery from a eukaryotic thermophile.Q43029071
Detection of functional modules from protein interaction networks.Q47285412
Functional base-pairing interaction between highly conserved elements of U3 small nucleolar RNA and the small ribosomal subunit RNAQ56903372
Structure of Utp21 Tandem WD Domain Provides Insight into the Organization of the UTPB Complex Involved in Ribosome SynthesisQ27681469
Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic RibosomeQ27719631
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiaeQ27860636
Gene RRN4 in Saccharomyces cerevisiae encodes the A12.2 subunit of RNA polymerase I and is essential only at high temperaturesQ27930155
A protein interaction map of the LSU processomeQ27930981
Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophileQ27930997
Components of an interdependent unit within the SSU processome regulate and mediate its activity.Q27931944
The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.Q27933023
Comprehensive analysis of diverse ribonucleoprotein complexes.Q27934310
Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes.Q27935682
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesisQ27937306
High-definition macromolecular composition of yeast RNA-processing complexesQ27937860
Global landscape of protein complexes in the yeast Saccharomyces cerevisiaeQ27938796
RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome componentsQ27938887
The DEAD-box RNA helicase-like Utp25 is an SSU processome componentQ27939534
Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeastQ28131604
The tandem affinity purification (TAP) method: a general procedure of protein complex purificationQ28131621
Yeast vectors for the controlled expression of heterologous proteins in different genetic backgroundsQ28131643
The economics of ribosome biosynthesis in yeastQ28131645
Cotranscriptional events in eukaryotic ribosome synthesisQ28247103
In vitro reconstitution of yeast tUTP/UTP A and UTP B subcomplexes provides new insights into their modular architectureQ28542701
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databasesQ28660703
Biochemical and genetic analysis of the yeast proteome with a movable ORF collectionQ29619667
Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiaeQ30435434
A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.Q33289674
Assembling a protein-protein interaction map of the SSU processome from existing datasetsQ33851535
The human plasma membrane peripherome: visualization and analysis of interactions.Q33892957
Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNAQ33937656
Yeast protein-protein interaction assays and screensQ33948138
Interactions of Isw2 chromatin remodeling complex with nucleosomal arrays: analyses using recombinant yeast histones and immobilized templatesQ33967628
clusterMaker: a multi-algorithm clustering plugin for CytoscapeQ34070756
Genetics. Mysterious ribosomopathiesQ34366093
Ribosomopathies: mechanisms of diseaseQ34454066
Nucleolar organizer regions: genomic 'dark matter' requiring illuminationQ34535814
P4510describes a project that usesCytoscapeQ3699942
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectSaccharomyces cerevisiaeQ719725
P304page(s)77-89
P577publication date2017-10-20
P1433published inRNAQ7277164
P1476titleThe SSU processome interactome in Saccharomyces cerevisiae reveals novel protein subcomplexes
P478volume24

Reverse relations

cites work (P2860)
Q50135088Assembly and structure of the SSU processome-a nucleolar precursor of the small ribosomal subunit.
Q93360289Ribosome assembly coming into focus
Q93040786Synergistic defects in pre-rRNA processing from mutations in the U3-specific protein Rrp9 and U3 snoRNA
Q57753194Utp14 interaction with the small subunit processome

Search more.