Whole-genome fetal and maternal DNA methylation analysis using MeDIP-NGS for the identification of differentially methylated regions.

scientific article published on 11 November 2016

Whole-genome fetal and maternal DNA methylation analysis using MeDIP-NGS for the identification of differentially methylated regions. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1017/S0016672316000136
P932PMC publication ID6865150
P698PubMed publication ID27834155

P50authorKyriakos TsangarasQ52769148
P2093author name stringPetros Mina
Achilleas Achilleos
Anna Keravnou
Carolina Sismani
Charalambos Loizides
Elena Kypri
George Koumbaris
Marios Ioannides
Philippos C Patsalis
Pavlos Antoniou
Michael D Hadjidaniel
Skevi Kyriakou
Elisavet A Papageorgiou
Maria Neofytou
P2860cites workSystematic Search for Placental DNA-Methylation Markers on Chromosome 21: Toward a Maternal Plasma-Based Epigenetic Test for Fetal Trisomy 21Q58029321
Methylated DNA immunoprecipitation (MeDIP) from low amounts of cellsQ84830766
Fetal Blood Group Genotyping: Present and FutureQ22241675
IDT SciTools: a suite for analysis and design of nucleic acid oligomersQ24646200
Fast and accurate short read alignment with Burrows-Wheeler transformQ24653853
Methylation-specific oligonucleotide microarray: a new potential for high-throughput methylation analysisQ24673086
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing dataQ27860742
The Sequence Alignment/Map format and SAMtoolsQ27860966
Prenatal Diagnosis of Fetal RhD Status by Molecular Analysis of Maternal PlasmaQ28314918
Illumina sequencing library preparation for highly multiplexed target capture and sequencingQ29614704
Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genomeQ30361602
Microfluidics digital PCR reveals a higher than expected fraction of fetal DNA in maternal plasmaQ33360224
A microarray-based approach for the identification of epigenetic biomarkers for the noninvasive diagnosis of fetal diseaseQ33489738
Multiplexed DNA sequence capture of mitochondrial genomes using PCR productsQ33754699
The Epigenome View: An Effort towards Non-Invasive Prenatal DiagnosisQ33891689
Detection of the placental epigenetic signature of the maspin gene in maternal plasma.Q34078379
Principles and challenges of genomewide DNA methylation analysisQ34096366
Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineageQ34153652
Fetal-specific DNA methylation ratio permits noninvasive prenatal diagnosis of trisomy 21.Q34168875
Non-invasive prenatal measurement of the fetal genomeQ34286073
Screening significantly hypermethylated genes in fetal tissues compared with maternal blood using a methylated-CpG island recovery assay-based microarrayQ34308038
Methylation and colorectal cancerQ34378429
Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencingQ34382581
Quantitative analysis of fetal DNA in maternal plasma and serum: implications for noninvasive prenatal diagnosis.Q34385131
Inter-individual methylation variability in differentially methylated regions between maternal whole blood and first trimester CVS.Q34568851
Discovery of epigenetic biomarkers for the noninvasive diagnosis of fetal diseaseQ35020525
Rapid and simple prenatal diagnosis of common chromosome disorders: advantages and disadvantages of the molecular methods FISH and QF-PCR.Q35216798
Microarray-Based Analysis of Methylation Status of CpGs in Placental DNA and Maternal Blood DNA--Potential New Epigenetic Biomarkers for Cell Free Fetal DNA-Based DiagnosisQ35730355
Noninvasive whole-genome sequencing of a human fetus.Q36048523
DNA methylation and gene silencing in cancerQ36338042
The origin of human aneuploidy: where we have been, where we are goingQ36958145
Noninvasive prenatal diagnosis of fetal chromosomal aneuploidy by massively parallel genomic sequencing of DNA in maternal plasmaQ37010246
Sites of differential DNA methylation between placenta and peripheral blood: molecular markers for noninvasive prenatal diagnosis of aneuploidiesQ37164146
In memoriam of Anna D Polityko (17.12.1959 - 20.04.2013).Q37493671
Noninvasive prenatal detection of trisomy 21 by an epigenetic-genetic chromosome-dosage approach.Q39904859
Noninvasive prenatal methylomic analysis by genomewide bisulfite sequencing of maternal plasma DNA.Q44160249
A method for noninvasive detection of fetal large deletions/duplications by low coverage massively parallel sequencingQ45049473
Isolation of cell-free DNA from maternal plasma using manual and automated systemsQ47761369
DNA methylome profiling of maternal peripheral blood and placentas reveal potential fetal DNA markers for non-invasive prenatal testing.Q50650841
Cell-Free DNA Analysis of Targeted Genomic Regions in Maternal Plasma for Non-Invasive Prenatal Testing of Trisomy 21, Trisomy 18, Trisomy 13, and Fetal Sex.Q50658711
MeDIP real-time qPCR of maternal peripheral blood reliably identifies trisomy 21.Q51340074
Cutadapt removes adapter sequences from high-throughput sequencing readsQ55953584
Optimized Real-Time Quantitative PCR Measurement of Male Fetal DNA in Maternal PlasmaQ56001886
Candidate epigenetic biomarkers for non-invasive prenatal diagnosis of Down syndromeQ56765605
Maternal Plasma DNA Sequencing Reveals the Genome-Wide Genetic and Mutational Profile of the FetusQ56937251
Presence of fetal DNA in maternal plasma and serumQ57075132
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P921main subjectDNA methylationQ874745
whole genome sequencingQ2068526
P304page(s)e15
P577publication date2016-11-11
P1433published inGenetics ResearchQ15758859
P1476titleWhole-genome fetal and maternal DNA methylation analysis using MeDIP-NGS for the identification of differentially methylated regions
P478volume98

Reverse relations

cites work (P2860)
Q89445161Air pollution during pregnancy and placental adaptation in the levels of global DNA methylation
Q91846514Development of a new methylation-based fetal fraction estimation assay using multiplex ddPCR
Q55424345MeDIP combined with in-solution targeted enrichment followed by NGS: Inter-individual methylation variability of fetal-specific biomarkers and their implementation in a proof of concept study for NIPT.

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