Establishment of monitoring methods for autophagy in rice reveals autophagic recycling of chloroplasts and root plastids during energy limitation

scientific article published on 25 February 2015

Establishment of monitoring methods for autophagy in rice reveals autophagic recycling of chloroplasts and root plastids during energy limitation is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1104/PP.114.254078
P8608Fatcat IDrelease_zzvwlglma5gdtciq55onfhjggq
P932PMC publication ID4378162
P698PubMed publication ID25717038
P5875ResearchGate publication ID272837535

P50authorMasanori IzumiQ46757193
Kazuyuki KuchitsuQ57560846
Shinya WadaQ57694436
P2093author name stringJun Hidema
Hiroyuki Ishida
Takamitsu Kurusu
Amane Makino
Eri Kondo
P2860cites workAn Arabidopsis homolog of yeast ATG6/VPS30 is essential for pollen germinationQ27931621
Molecular dissection of autophagy: two ubiquitin-like systemsQ28206420
Senescence is induced in individually darkened Arabidopsis leaves, but inhibited in whole darkened plantsQ28363848
Methods in mammalian autophagy researchQ29547276
Autophagosome formation: core machinery and adaptationsQ29547417
Development by self-digestion: molecular mechanisms and biological functions of autophagyQ29547880
COPPER ENZYMES IN ISOLATED CHLOROPLASTS. POLYPHENOLOXIDASE IN BETA VULGARISQ29615362
Dynamics and diversity in autophagy mechanisms: lessons from yeastQ29620685
Autophagy regulated by day length determines the number of fertile florets in wheatQ33345665
Role and regulation of autophagy in heat stress responses of tomato plantsQ33574657
Autophagosome formation in mammalian cellsQ33964242
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thalianaQ34133892
Autophagy: pathways for self-eating in plant cellsQ34246850
Highly oxidized peroxisomes are selectively degraded via autophagy in ArabidopsisQ34394370
The ATG12-conjugating enzyme ATG10 Is essential for autophagic vesicle formation in Arabidopsis thalianaQ36515768
Dynamic morphology of plastids and stromules in angiosperm plantsQ37035349
OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther developmentQ37428811
Autophagy: a multifaceted intracellular system for bulk and selective recyclingQ38018395
Beginning to understand autophagy, an intracellular self-degradation system in plantsQ38024090
Roles of autophagy in chloroplast recycling.Q38165585
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).Q38675598
Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation.Q40094438
Protein aggregates are transported to vacuoles by a macroautophagic mechanism in nutrient-starved plant cellsQ40250446
The dynamics of autophagy visualized in live cells: from autophagosome formation to fusion with endo/lysosomesQ40250494
Autophagy deficiency leads to accumulation of ubiquitinated proteins, ER stress, and cell death in ArabidopsisQ42150787
Biochemical methods to monitor autophagy-related processes in yeastQ42448712
ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B lociQ42466908
The autophagic degradation of chloroplasts via rubisco-containing bodies is specifically linked to leaf carbon status but not nitrogen status in Arabidopsis.Q42920986
Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in ArabidopsisQ43272849
Photosynthesis, leaf resistances, and ribulose-1,5-bisphosphate carboxylase degradation in senescing barley leavesQ43810794
Assessment and optimization of autophagy monitoring methods in Arabidopsis roots indicate direct fusion of autophagosomes with vacuolesQ44111994
AUTOPHAGY-RELATED11 plays a critical role in general autophagy- and senescence-induced mitophagy in Arabidopsis.Q44303969
Autophagy-related proteins are required for degradation of peroxisomes in Arabidopsis hypocotyls during seedling growthQ44360521
Transport of rice cyclobutane pyrimidine dimer photolyase into mitochondria relies on a targeting sequence located in its C-terminal internal regionQ45853890
Autophagy contributes to nighttime energy availability for growth in ArabidopsisQ46302970
AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thalianaQ46462443
The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in ArabidopsisQ46508073
The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availabilityQ48073080
Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathwaysQ48128317
Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy geneQ48293886
Evidence for contribution of autophagy to rubisco degradation during leaf senescence in Arabidopsis thaliana.Q50487104
Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis.Q50501102
The impact of light intensity on shade-induced leaf senescence.Q50520608
Mobilization of rubisco and stroma-localized fluorescent proteins of chloroplasts to the vacuole by an ATG gene-dependent autophagic process.Q50628674
Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice.Q50716074
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy.Q50788960
Autophagy plays a role in chloroplast degradation during senescence in individually darkened leaves.Q52590827
A possible involvement of autophagy in amyloplast degradation in columella cells during hydrotropic response of Arabidopsis rootsQ57745289
The large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is fragmented into 37-kDa and 16-kDa polypeptides by active oxygen in the lysates of chloroplasts from primary leaves of wheatQ73400921
Differences between Maize and Rice in N-use Efficiency for Photosynthesis and Protein AllocationQ79102046
Increased Rubisco content in transgenic rice transformed with the 'sense' rbcS geneQ80018985
Improved Gateway binary vectors: high-performance vectors for creation of fusion constructs in transgenic analysis of plantsQ80776627
Autophagy in tobacco BY-2 cells cultured under sucrose starvation conditions: isolation of the autolysosome and its characterizationQ82265563
Differences in expression of the RBCS multigene family and rubisco protein content in various rice plant tissues at different growth stagesQ84499362
Organ-specific quality control of plant peroxisomes is mediated by autophagyQ87165186
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectautophagyQ288322
P304page(s)1307-1320
P577publication date2015-02-25
P1433published inPlant PhysiologyQ3906288
P1476titleEstablishment of monitoring methods for autophagy in rice reveals autophagic recycling of chloroplasts and root plastids during energy limitation
P478volume167

Reverse relations

cites work (P2860)
Q42048667ATG5-knockout mutants of Physcomitrella provide a platform for analyzing the involvement of autophagy in senescence processes in plant cells
Q37599034ATG9 regulates autophagosome progression from the endoplasmic reticulum in Arabidopsis.
Q90209740An additional role for chloroplast proteins-an amino acid reservoir for energy production during sugar starvation
Q64061733Autophagic Turnover of Chloroplasts: Its Roles and Regulatory Mechanisms in Response to Sugar Starvation
Q60916602Autophagy in crop plants: what's new beyond ?
Q46757132Autophagy supports biomass production and nitrogen use efficiency at the vegetative stage in rice
Q46392657Autophagy, programmed cell death and reactive oxygen species in sexual reproduction in plants.
Q42376895Autophagy-mediated regulation of phytohormone metabolism during rice anther development.
Q55033804Chloroplast Protein Turnover: The Influence of Extraplastidic Processes, Including Autophagy.
Q26779161Chloroplast signaling within, between and beyond cells
Q46559827Delaying chloroplast turnover increases water-deficit stress tolerance through the enhancement of nitrogen assimilation in rice
Q96431853Diel magnesium fluctuations in chloroplasts contribute to photosynthesis in rice
Q35937539Differential Subplastidial Localization and Turnover of Enzymes Involved in Isoprenoid Biosynthesis in Chloroplasts
Q48310961Entire Photodamaged Chloroplasts Are Transported to the Central Vacuole by Autophagy.
Q91767804Essential roles of autophagy in metabolic regulation in endosperm development during rice seed maturation
Q58788053Evidence for preservation of vacuolar compartments during foehn-induced chalky ring formation of Oryza sativa L
Q94561496Friend or Enemy: A Dual Role of Autophagy in Plant Virus Infection
Q42754935From Arabidopsis to cereal crops: Conservation of chloroplast protein degradation by autophagy indicates its fundamental role in plant productivity
Q64059577Imaging Amyloplasts in the Developing Endosperm of Barley and Rice
Q90640001Impact of Autophagy on Gene Expression and Tapetal Programmed Cell Death During Pollen Development in Rice
Q64248996Increased Autophagy of Rice Can Increase Yield and Nitrogen Use Efficiency (NUE)
Q92405469Marchantia polymorpha, a New Model Plant for Autophagy Studies
Q47190200Multiscale and Multimodal Approaches to Study Autophagy in Model Plants
Q47097486Partial or entire: Distinct responses of two types of chloroplast autophagy
Q88633728Selective Elimination of Membrane-Damaged Chloroplasts via Microautophagy
Q48373529Stromules: Probing Formation and Function.
Q47259619The role of chloroplasts in plant pathology
Q47676654Vacuolar degradation of chloroplast components: autophagy and beyond