| scholarly article | Q13442814 |
| P356 | DOI | 10.1007/S00438-004-1075-8 |
| P2888 | exact match | https://scigraph.springernature.com/pub.10.1007/s00438-004-1075-8 |
| P8608 | Fatcat ID | release_3iknz2n4vbccpe36gf6ouj4b3e |
| P698 | PubMed publication ID | 15583938 |
| P5875 | ResearchGate publication ID | 8143870 |
| P2093 | author name string | Y Sugiyama | |
| M Sugiura | |||
| A Hirai | |||
| M Nagase | |||
| N Makita | |||
| Y Watase | |||
| S Yagura | |||
| P2860 | cites work | The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants | Q22066250 |
| The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools | Q24248165 | ||
| The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. | Q24531822 | ||
| tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence | Q24544402 | ||
| Base-calling of automated sequencer traces using phred. I. Accuracy assessment | Q27860665 | ||
| Consed: a graphical tool for sequence finishing | Q27860740 | ||
| Multiple losses and transfers to the nucleus of two mitochondrial succinate dehydrogenase genes during angiosperm evolution | Q28343970 | ||
| The origin of plants: body plan changes contributing to a major evolutionary radiation | Q28776177 | ||
| REPuter: the manifold applications of repeat analysis on a genomic scale | Q29617500 | ||
| Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology | Q29618182 | ||
| Origin and evolution of the mitochondrial proteome | Q30975353 | ||
| Male-sterile tobacco displays abnormal mitochondrial atp1 transcript accumulation and reduced floral ATP/ADP ratio | Q33334589 | ||
| Evolution of organellar genomes | Q33801588 | ||
| Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates | Q33946950 | ||
| Symbiosis as a mechanism of evolution: status of cell symbiosis theory | Q34090077 | ||
| Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution | Q34097870 | ||
| Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics | Q34353163 | ||
| The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants | Q34529643 | ||
| The enigmatic mitochondrial ORF ymf39 codes for ATP synthase chain b | Q34980190 | ||
| Substoichiometric shifting in the plant mitochondrial genome is influenced by a gene homologous to MutS | Q35022544 | ||
| Three mitochondrial tRNA genes from Arabidopsis thaliana: evidence for the conversion of a tRNAPhe gene into a tRNATyr gene | Q36016385 | ||
| High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene | Q36081161 | ||
| The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana | Q36372919 | ||
| The complete nucleotide sequence of the mitochondrial genome of sugar beet (Beta vulgaris L.) reveals a novel gene for tRNA(Cys)(GCA) | Q39543148 | ||
| A conserved core element is functionally important for maize mitochondrial promoter activity in vitro | Q39721342 | ||
| Chloroplast-like transfer RNA genes expressed in wheat mitochondria. | Q40451752 | ||
| The maize mitochondrial genome: dynamic, yet functional | Q40461982 | ||
| A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon | Q40523311 | ||
| Size and Structure of Replicating Mitochondrial DNA in Cultured Tobacco Cells | Q41218627 | ||
| Both RNA editing and RNA cleavage are required for translation of tobacco chloroplast ndhD mRNA: a possible regulatory mechanism for the expression of a chloroplast operon consisting of functionally unrelated genes. | Q42092164 | ||
| A gene involved in the biogenesis of c-type cytochromes is co-transcribed with a ribosomal protein gene in wheat mitochondria [corrected]. | Q42608188 | ||
| Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. | Q42617674 | ||
| Loss of RNA editing of rps1 sequences in Oenothera mitochondria | Q42644644 | ||
| The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides | Q42647751 | ||
| The ATPase subunit 6 gene of tobacco mitochondria contains an unusual sequence | Q42650710 | ||
| Characterization of the gene urf13-T and an unidentified reading frame, ORF 25, in maize and tobacco mitochondria | Q42659191 | ||
| Complex II subunit 4 (sdh4) homologous sequences in plant mitochondrial genomes. | Q42685523 | ||
| Reversible changes in the composition of the population of mtDNAs during dedifferentiation and regeneration in tobacco. | Q42965150 | ||
| Functional importance of nucleotide identities within the pea atp9 mitochondrial promoter sequence | Q44070143 | ||
| Transcription of succinate dehydrogenase subunit 4 (sdh4) gene in potato: detection of extensive RNA editing and co-transcription with cytochrome oxidase subunit III (cox3) gene | Q44098291 | ||
| The mitochondrial genome of Arabidopsis is composed of both native and immigrant information | Q44497661 | ||
| Comparison of the mitochondrial genome of Nicotiana tabacum with its progenitor species | Q44870877 | ||
| Repeated, recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants | Q47810371 | ||
| The tobacco apocytochrome b gene predicts sensitivity to the respiratory inhibitors antimycin A and myxothiazol | Q47852939 | ||
| Creation of an initiation codon by RNA editing in the coxI transcript from tomato mitochondria | Q48070074 | ||
| The cox1 Initiation Codon Is Created by RNA Editing in Potato Mitochondria | Q48072483 | ||
| Splicing and editing of rps10 transcripts in potato mitochondria | Q48074240 | ||
| The mitochondrial genome of Chara vulgaris: insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants | Q48234132 | ||
| The tobacco mitochondrial ATPase subunit 9 gene is closely linked to an open reading frame for a ribosomal protein | Q48363595 | ||
| Phage T4-like intermediates of DNA replication and recombination in the mitochondria of the higher plant Chenopodium album (L.). | Q52971490 | ||
| Physical mapping of the mitochondrial genome of Arabidopsis thaliana by cosmid and YAC clones | Q63090343 | ||
| Stoichiometric shifts in the common bean mitochondrial genome leading to male sterility and spontaneous reversion to fertility | Q95435056 | ||
| P433 | issue | 6 | |
| P921 | main subject | mitochondrion | Q39572 |
| P304 | page(s) | 603-615 | |
| P577 | publication date | 2004-12-03 | |
| P1433 | published in | Molecular Genetics and Genomics | Q15753424 |
| P1476 | title | The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants | |
| P478 | volume | 272 |
| Q33525242 | A complete mitochondrial genome of wheat (Triticum aestivum cv. Chinese Yumai), and fast evolving mitochondrial genes in higher plants |
| Q36122505 | A maternally inherited DNA marker, descended from Solanum demissum (2n = 6x = 72) to S. tuberosum (2n = 4x = 48). |
| Q35657318 | A novel mitochondrial genome architecture in thrips (Insecta: Thysanoptera): extreme size asymmetry among chromosomes and possible recent control region duplication |
| Q42650960 | A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii |
| Q34086128 | An efficient procedure for plant organellar genome assembly, based on whole genome data from the 454 GS FLX sequencing platform |
| Q33535517 | An unedited 1.1 kb mitochondrial orfB gene transcript in the wild abortive cytoplasmic male sterility (WA-CMS) system of Oryza sativa L. subsp. indica |
| Q22065312 | An unexpectedly large and loosely packed mitochondrial genome in the charophycean green alga Chlorokybus atmophyticus |
| Q37399481 | Analysis of the Complete Mitochondrial Genome Sequence of the Diploid Cotton Gossypium raimondii by Comparative Genomics Approaches. |
| Q90647480 | Assembly of the Mitochondrial Genome in the Campanulaceae Family Using Illumina Low-Coverage Sequencing |
| Q33890010 | Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing. |
| Q36742705 | Cell-to-cell movement of mitochondria in plants |
| Q35787230 | Cell-to-cell movement of plastids in plants |
| Q89357267 | Characterization of genes specific to sua-CMS in Nicotiana tabacum |
| Q91712356 | Comparative Analysis of the Mitochondrial Genomes of Nicotiana tabacum: Hints Toward the Key Factors Closely Related to the Cytoplasmic Male Sterility Mechanism |
| Q34818105 | Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line |
| Q38058338 | Comparative genomics in the Amoebozoa clade |
| Q35681372 | Comparative studies of mitochondrial proteomics reveal an intimate protein network of male sterility in wheat (Triticum aestivum L.). |
| Q58095212 | Comparative study on mitogenomes of green tide algae |
| Q52598440 | Comparison of mitochondrial and chloroplast genome segments from three onion (Allium cepa L.) cytoplasm types and identification of a trans-splicing intron of cox2. |
| Q47123107 | Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues. |
| Q37000583 | Complete Chloroplast Genome of Nicotiana otophora and its Comparison with Related Species |
| Q35231907 | Complete mitochondrial genome of Eruca sativa Mill. (Garden rocket) |
| Q48040145 | Complete mitochondrial genome sequence and identification of a candidate gene responsible for cytoplasmic male sterility in radish (Raphanus sativus L.) containing DCGMS cytoplasm |
| Q34494496 | Complete sequence of heterogenous-composition mitochondrial genome (Brassica napus) and its exogenous source |
| Q58707859 | Complete sequence of kenaf (Hibiscus cannabinus) mitochondrial genome and comparative analysis with the mitochondrial genomes of other plants |
| Q33712741 | Complete sequences of organelle genomes from the medicinal plant Rhazya stricta (Apocynaceae) and contrasting patterns of mitochondrial genome evolution across asterids |
| Q46327231 | Complete sequencing and comparative analyses of the pepper (Capsicum annuum L.) plastome revealed high frequency of tandem repeats and large insertion/deletions on pepper plastome |
| Q37454899 | Computational models in plant-pathogen interactions: the case of Phytophthora infestans |
| Q52033277 | Constancy of organellar genome copy numbers during leaf development and senescence in higher plants. |
| Q54596145 | Copy number of bean mitochondrial genes estimated by real-time PCR does not correlate with the number of gene loci and transcript levels. |
| Q38316018 | Current status and prospects for the study of Nicotiana genomics, genetics, and nicotine biosynthesis genes |
| Q37212973 | Cytoplasmic male sterility-associated chimeric open reading frames identified by mitochondrial genome sequencing of four Cajanus genotypes |
| Q36220909 | DNA maintenance in plastids and mitochondria of plants |
| Q35085387 | Deep sequencing of the tobacco mitochondrial transcriptome reveals expressed ORFs and numerous editing sites outside coding regions |
| Q33546750 | Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes |
| Q30910897 | Discovery of the rpl10 gene in diverse plant mitochondrial genomes and its probable replacement by the nuclear gene for chloroplast RPL10 in two lineages of angiosperms |
| Q37285646 | Dissecting organ-specific transcriptomes through RNA-sequencing |
| Q33345277 | Do recent findings in plant mitochondrial molecular and population genetics have implications for the study of gynodioecy and cytonuclear conflict? |
| Q34032704 | Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis |
| Q33545269 | EST analysis and annotation of transcripts derived from a trichome-specific cDNA library from Salvia fruticosa |
| Q35273929 | Effective extraction and assembly methods for simultaneously obtaining plastid and mitochondrial genomes |
| Q40304924 | Encapsidation of Host RNAs by Cucumber Necrosis Virus Coat Protein during both Agroinfiltration and Infection. |
| Q35787032 | Environmental stress increases the entry of cytoplasmic organellar DNA into the nucleus in plants |
| Q34245817 | Evidence against equimolarity of large repeat arrangements and a predominant master circle structure of the mitochondrial genome from a monkeyflower (Mimulus guttatus) lineage with cryptic CMS |
| Q35745187 | Exceptional transmission of plastids and mitochondria from the transplastomic pollen parent and its impact on transgene containment |
| Q111629613 | Exploring the potential of nuclear and mitochondrial sequencing data generated through genome‐skimming for plant phylogenetics: A case study from a clade of neotropical lianas |
| Q33652306 | Expression Profiling of Tobacco Leaf Trichomes Identifies Genes for Biotic and Abiotic Stresses |
| Q33352797 | Expression of mitochondrial gene fragments within the tapetum induce male sterility by limiting the biogenesis of the respiratory machinery in transgenic tobacco |
| Q33941509 | Extensive structural variations between mitochondrial genomes of CMS and normal peppers (Capsicum annuum L.) revealed by complete nucleotide sequencing |
| Q38193808 | Group II intron splicing factors in plant mitochondria |
| Q36501296 | Heteroplasmy as a common state of mitochondrial genetic information in plants and animals |
| Q42557005 | Homologous recombination and retention of a single form of most genes shape the highly chimeric mitochondrial genome of a cybrid plant |
| Q30829828 | Horizontal genome transfer as an asexual path to the formation of new species |
| Q79661468 | Identification of a novel chimeric gene, orf725, and its use in development of a molecular marker for distinguishing among three cytoplasm types in onion (Allium cepa L.). |
| Q48157271 | Identification of different cytoplasms based on newly developed mitotype-specific markers for marker-assisted selection breeding in Brassica napus L. |
| Q45809567 | Identification of highly variable chloroplast sequences and development of cpDNA-based molecular markers that distinguish four cytoplasm types in radish (Raphanus sativus L.). |
| Q46228130 | Identification of mitochondrial genome rearrangements unique to novel cytoplasmic male sterility in radish (Raphanus sativus L.). |
| Q48125184 | Inactivation of organellar glutamyl- and seryl-tRNA synthetases leads to developmental arrest of chloroplasts and mitochondria in higher plants |
| Q42021318 | Interorganellar DNA transfer in wheat: dynamics and phylogenetic origin |
| Q42609462 | Isolation and characterization of the cytoplasmic male sterility-associated orf456 gene of chili pepper (Capsicum annuum L.). |
| Q48049590 | Loss of two introns from the Magnolia tripetala mitochondrial cox2 gene implicates horizontal gene transfer and gene conversion as a novel mechanism of intron loss |
| Q47231372 | Maize Dek37 Encodes a P-Type PPR Protein That Affects Cis-splicing of Mitochondrial nad2 Intron 1 and Seed Development |
| Q40214914 | Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5' and 3' end formation |
| Q46526902 | Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). |
| Q28960327 | Mitochondrial DNA Sequences in Plant Phylogenetics and Evolution: Symposium at XVII IBC, Vienna, Austria |
| Q35979826 | Mitochondrial Genome Analysis of Wild Rice (Oryza minuta) and Its Comparison with Other Related Species |
| Q34046316 | Mitochondrial genome sequencing helps show the evolutionary mechanism of mitochondrial genome formation in Brassica |
| Q54521271 | Mitochondrial mRNA polymorphisms in different Arabidopsis accessions. |
| Q35555967 | Molecular characterization and application of a novel cytoplasmic male sterility-associated mitochondrial sequence in rice |
| Q57179046 | Molecular evolution: Lateral gene transfer and other possibilities |
| Q34181477 | Mosaic origins of a complex chimeric mitochondrial gene in Silene vulgaris |
| Q34029246 | Multiple recent horizontal transfers of the cox1 intron in Solanaceae and extended co-conversion of flanking exons |
| Q59360973 | Next generation sequencing reveals packaging of host RNAs by brome mosaic virus |
| Q86582931 | Nuclear and cytoplasmic genome components of Solanum tuberosum + S. chacoense somatic hybrids and three SSR alleles related to bacterial wilt resistance |
| Q48085874 | Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris |
| Q33250261 | Pervasive survival of expressed mitochondrial rps14 pseudogenes in grasses and their relatives for 80 million years following three functional transfers to the nucleus |
| Q111629303 | Plant mitochondrial genome peculiarities evolving in the earliest vascular plant lineages |
| Q51987533 | Plant mitochondrial recombination surveillance requires unusual RecA and MutS homologs. |
| Q98290579 | Plastid genomics of Nicotiana (Solanaceae): insights into molecular evolution, positive selection and the origin of the maternal genome of Aztec tobacco (Nicotiana rustica) |
| Q34137652 | Rapid sequencing of the bamboo mitochondrial genome using Illumina technology and parallel episodic evolution of organelle genomes in grasses |
| Q90621923 | Repeats of Unusual Size in Plant Mitochondrial Genomes: Identification, Incidence and Evolution |
| Q33516039 | Ribosomal protein L10 is encoded in the mitochondrial genome of many land plants and green algae |
| Q38974421 | Root-knot nematode (Meloidogyne spp.) Me resistance genes in pepper (Capsicum annuum L.) are clustered on the P9 chromosome. |
| Q24812530 | Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome |
| Q33851528 | Substoichiometrically different mitotypes coexist in mitochondrial genomes of Brassica napus L |
| Q28705183 | The "fossilized" mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate |
| Q22066012 | The Complete Chloroplast and Mitochondrial DNA Sequence of Ostreococcus tauri: Organelle Genomes of the Smallest Eukaryote Are Examples of Compaction |
| Q35774021 | The Mosaic Mutants of Cucumber: A Method to Produce Knock-Downs of Mitochondrial Transcripts |
| Q46531338 | The Roles of Mutation, Selection, and Expression in Determining Relative Rates of Evolution in Mitochondrial versus Nuclear Genomes |
| Q34487867 | The chloroplast genome of Nicotiana sylvestris and Nicotiana tomentosiformis: complete sequencing confirms that the Nicotiana sylvestris progenitor is the maternal genome donor of Nicotiana tabacum |
| Q21090952 | The complete chloroplast and mitochondrial genome sequences of Boea hygrometrica: insights into the evolution of plant organellar genomes |
| Q34934455 | The complete mitochondrial genome of Gossypium hirsutum and evolutionary analysis of higher plant mitochondrial genomes |
| Q92777525 | The complete mitochondrial genome of Taxus cuspidata (Taxaceae): eight protein-coding genes have transferred to the nuclear genome |
| Q39783672 | The complete mitochondrial genome sequence of Sua-type cytoplasmic male sterility of tobacco (Nicotiana tabacum). |
| Q43712083 | The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. |
| Q92190038 | The complete organelle genomes of Physochlaina orientalis: Insights into short sequence repeats across seed plant mitochondrial genomes |
| Q37873957 | The evolution of RNA editing and pentatricopeptide repeat genes. |
| Q34632560 | The genome and transcriptome of perennial ryegrass mitochondria |
| Q48064133 | The levels of male gametic mitochondrial DNA are highly regulated in angiosperms with regard to mitochondrial inheritance |
| Q30299998 | The massive mitochondrial genome of the angiosperm Silene noctiflora is evolving by gain or loss of entire chromosomes |
| Q37117402 | The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features |
| Q42656950 | The mitochondrial genome of a cytoplasmic male sterile line of perennial ryegrass (Lolium perenne L.) contains an integrated linear plasmid-like element |
| Q30433394 | The mitochondrial genome of the legume Vigna radiata and the analysis of recombination across short mitochondrial repeats |
| Q34236986 | The mitochondrial genome of the lycophyte Huperzia squarrosa: the most archaic form in vascular plants |
| Q42606770 | The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants |
| Q28744219 | The mitochondrial genomes of the early land plants Treubia lacunosa and Anomodon rugelii: dynamic and conservative evolution |
| Q21089887 | The multipartite mitochondrial genome of Liposcelis bostrychophila: insights into the evolution of mitochondrial genomes in bilateral animals |
| Q52583075 | The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana. |
| Q48106519 | The rice mitochondrial genomes and their variations |
| Q88673319 | Towards a comprehensive picture of C-to-U RNA editing sites in angiosperm mitochondria |
| Q45759996 | Tracing plant Mitochondrial DNA evolution: rearrangements of the ancient mitochondrial gene cluster trnA-trnT-nad7 in liverwort phylogeny |
| Q80240170 | Transcriptional regulation of 10 mitochondrial genes in different tissues of NCa CMS system in Brassica napus L. and their relationship with sterility |
| Q33917608 | Transcriptome map of plant mitochondria reveals islands of unexpected transcribed regions |
| Q34457633 | Transcriptome sequencing and de novo analysis of cytoplasmic male sterility and maintenance in JA-CMS cotton |
| Q35224425 | Transfection of plant mitochondria and in organello gene integration |
| Q33289849 | Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA. |
| Q33384937 | Transfer of rice mitochondrial ribosomal protein L6 gene to the nucleus: acquisition of the 5'-untranslated region via a transposable element |
| Q91708144 | Whole Plastome Sequencing Within Silene Section Psammophilae Reveals Mainland Hybridization and Divergence With the Balearic Island Populations |
| Q43665531 | mCSF1, a nucleus-encoded CRM protein required for the processing of many mitochondrial introns, is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis |
| Q51801853 | nMAT1, a nuclear-encoded maturase involved in the trans-splicing of nad1 intron 1, is essential for mitochondrial complex I assembly and function. |
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