| scholarly article | Q13442814 |
| P2093 | author name string | Biao Ding | |
| Yijun Qi | |||
| P2860 | cites work | Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding | Q24563684 |
| MicroRNAs in plants | Q24674274 | ||
| Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain | Q27748294 | ||
| An extensive class of small RNAs in Caenorhabditis elegans | Q27860626 | ||
| An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans | Q27860895 | ||
| Identification of novel genes coding for small expressed RNAs | Q27860917 | ||
| Prediction of plant microRNA targets | Q28219387 | ||
| Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA | Q29618382 | ||
| Endogenous and silencing-associated small RNAs in plants | Q29618383 | ||
| The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure | Q32020782 | ||
| Cellular basis of potato spindle tuber viroid systemic movement | Q33335265 | ||
| Developmental programming of the shoot meristem | Q33361656 | ||
| Localized upregulation of a new expansin gene predicts the site of leaf formation in the tomato meristem | Q33368792 | ||
| Conserved geometrical base-pairing patterns in RNA. | Q33857766 | ||
| Nucleotide sequence and secondary structure of potato spindle tuber viroid | Q34055713 | ||
| A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs | Q34067749 | ||
| An expanding universe of noncoding RNAs | Q34129019 | ||
| The sarcin/ricin loop, a modular RNA. | Q34321447 | ||
| Analysis of the virulence modulating region of potato spindle tuber viroid (PSTVd) by site-directed mutagenesis | Q34355582 | ||
| The dialogue between viruses and hosts in compatible interactions. | Q34785507 | ||
| Mapping the molecular determinant of pathogenicity in a hammerhead viroid: a tetraloop within the in vivo branched RNA conformation. | Q36440846 | ||
| Identification of multiple structural domains regulating viroid pathogenicity | Q37266771 | ||
| Viroids: from thermodynamics to cellular structure and function | Q37425588 | ||
| Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution | Q37522980 | ||
| Ultraviolet light-induced crosslinking reveals a unique region of local tertiary structure in potato spindle tuber viroid and HeLa 5S RNA. | Q37550714 | ||
| A determinant of disease symptom severity is located in the 3'-terminal noncoding region of the RNA of a plant virus | Q37614883 | ||
| Formation of a thermodynamically metastable structure containing hairpin II is critical for infectivity of potato spindle tuber viroid RNA. | Q38336254 | ||
| Detection and analysis of hairpin II, an essential metastable structural element in viroid replication intermediates | Q39686990 | ||
| Multiple pathways of reversion in viroids for conservation of structural elements | Q40872930 | ||
| Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV). | Q41412196 | ||
| Auxin-regulated genes encoding cell wall-modifying proteins are expressed during early tomato fruit growth | Q41719744 | ||
| Correlation between bending of the VM region and pathogenicity of different Potato Spindle Tuber Viroid strains | Q41998471 | ||
| Temperature-gradient gel electrophoresis. Thermodynamic analysis of nucleic acids and proteins in purified form and in cellular extracts | Q42089766 | ||
| Viroid processing: switch from cleavage to ligation is driven by a change from a tetraloop to a loop E conformation | Q42610441 | ||
| The conformation of loop E of eukaryotic 5S ribosomal RNA. | Q42618856 | ||
| P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction | Q44314640 | ||
| Effects of random mutagenesis upon potato spindle tuber viroid replication and symptom expression | Q44633289 | ||
| Trans-acting untranslated elements of groundnut rosette virus satellite RNA are involved in symptom production | Q45762453 | ||
| CEVd-induced symptom modification as a response to a host-specific temperature-sensitive reaction | Q46066106 | ||
| Potato spindle tuber viroid strains of different pathogenicity induces and suppresses expression of common and unique genes in infected tomato. | Q52112310 | ||
| RNA structural features responsible for potato spindle tuber viroid pathogenicity. | Q52521195 | ||
| Interdependence of pathogenicity and replicability with potato spindle tuber viroid | Q57149309 | ||
| The 5′ Noncoding Region of Grapevine Chrome Mosaic Nepovirus RNA-2 Triggers a Necrotic Response on ThreeNicotianaspp | Q57626845 | ||
| Mechanism of viroid pathogenesis: Differential activation of the interferon-induced, double-stranded RNA-activated, Mr 68 000 protein kinase by viroid strains of varying pathogenicity | Q60042541 | ||
| Mutational analysis of viroid pathogenicity: tomato apical stunt viroid | Q68390771 | ||
| Secondary structure probing of potato spindle tuber viroid (PSTVd) and sequence comparison with other small pathogenic RNA replicons provides evidence for central non-canonical base-pairs, large A-rich loops, and a terminal branch | Q71697098 | ||
| A single nucleotide substitution converts potato spindle tuber viroid (PSTVd) from a noninfectious to an infectious RNA for nicotiana tabacum | Q71859859 | ||
| Suppression of potato spindle tuber viroid replication and symptom expression by mutations which stabilize the pathogenicity domain | Q72230129 | ||
| Destabilization of potato spindle tuber viroid by mutations in the left terminal loop | Q73435240 | ||
| A conformational change in the "loop E-like" motif of the hairpin ribozyme is coincidental with domain docking and is essential for catalysis | Q73738771 | ||
| Limited correlation between expansin gene expression and elongation growth rate | Q74153725 | ||
| Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic | Q74776958 | ||
| N-terminal domain, residues 1-91, of ribosomal protein TL5 from Thermus thermophilus binds specifically and strongly to the region of 5S rRNA containing loop E | Q77838136 | ||
| Replication of Potato spindle tuber viroid in cultured cells of tobacco and Nicotiana benthamiana: the role of specific nucleotides in determining replication levels for host adaptation | Q78541602 | ||
| Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants | Q78817501 | ||
| P433 | issue | 6 | |
| P921 | main subject | cell growth | Q189159 |
| P304 | page(s) | 1360-1374 | |
| P577 | publication date | 2003-06-01 | |
| P1433 | published in | The Plant Cell | Q3988745 |
| P1476 | title | Inhibition of cell growth and shoot development by a specific nucleotide sequence in a noncoding viroid RNA. | |
| P478 | volume | 15 |
| Q28607535 | A mutual titer-enhancing relationship and similar localization patterns between Citrus exocortis viroid and Hop stunt viroid co-infecting two citrus cultivars |
| Q39192416 | A single base pair in the right terminal domain of tomato planta macho viroid is a virulence determinant factor on tomato |
| Q44630414 | A single nucleotide change in Hop stunt viroid modulates citrus cachexia symptoms |
| Q35784814 | A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation. |
| Q33344907 | A viroid RNA with a specific structural motif inhibits chloroplast development. |
| Q46005501 | Accumulation of Potato spindle tuber viroid-specific small RNAs is accompanied by specific changes in gene expression in two tomato cultivars. |
| Q48082378 | Accumulation of viroid-specific small RNAs and increase in nucleolytic activities linked to viroid-caused pathogenesis |
| Q42108699 | An element of the tertiary structure of Peach latent mosaic viroid RNA revealed by UV irradiation |
| Q33362548 | Callose Deposition in Plasmodesmata and Viroid Invasion of the Shoot Apical Meristem |
| Q80457763 | Characterization of small RNAs derived from Citrus exocortis viroid (CEVd) in infected tomato plants |
| Q45153936 | Chrysanthemum stunt viroid disturbs the photoperiodic response for flowering of chrysanthemum plants |
| Q42124114 | Cytopathic Effects Incited by Viroid RNAs and Putative Underlying Mechanisms. |
| Q40740837 | Detection of Potato spindle tuber viroid sequence variants derived from PSTVd-infected Phelipanche ramosa in flower organs of tomato plants |
| Q43537026 | Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid |
| Q48186820 | Direct role of a viroid RNA motif in mediating directional RNA trafficking across a specific cellular boundary |
| Q60042536 | Discovering viroids — a personal perspective |
| Q40558566 | Dissecting the secondary structure of the circular RNA of a nuclear viroid in vivo: A "naked" rod-like conformation similar but not identical to that observed in vitro. |
| Q28068223 | Diverse Functions of Small RNAs in Different Plant-Pathogen Communications |
| Q35635446 | Evidence for the existence of the loop E motif of Potato spindle tuber viroid in vivo |
| Q34335075 | Exon B of human surfactant protein A2 mRNA, alone or within its surrounding sequences, interacts with 14-3-3; role of cis-elements and secondary structure |
| Q57812959 | Genome-Wide Transcriptomic Analysis Reveals Insights into the Response to (CBCVd) in Hop ( L.) |
| Q46238613 | Identification of differentially expressed root genes upon rhizomania disease. |
| Q44963663 | In memory of Professor Biao Ding (1960-2015). |
| Q84586644 | In vivo generated Citrus exocortis viroid progeny variants display a range of phenotypes with altered levels of replication, systemic accumulation and pathogenicity |
| Q33360272 | Invasion of shoot apical meristems by Chrysanthemum stunt viroid differs among Argyranthemum cultivars |
| Q33362764 | Low Temperature Treatment Affects Concentration and Distribution of Chrysanthemum Stunt Viroid in Argyranthemum. |
| Q48059229 | Mexican papita viroid and tomato planta macho viroid belong to a single species in the genus Pospiviroid. |
| Q33494738 | Modification of tobacco plant development by sense and antisense expression of the tomato viroid-induced AGC VIIIa protein kinase PKV suggests involvement in gibberellin signaling |
| Q40999118 | Molecular dissection of a dahlia isolate of potato spindle tuber viroid inciting a mild symptoms in tomato |
| Q24623882 | On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites |
| Q58702436 | Pospiviroid Infection of Tomato Regulates the Expression of Genes Involved in Flower and Fruit Development |
| Q90697264 | Potato Spindle Tuber Viroid Modulates Its Replication through a Direct Interaction with a Splicing Regulator |
| Q48690695 | Potato spindle tuber viroid: the simplicity paradox resolved? |
| Q33308248 | Processing of nuclear viroids in vivo: an interplay between RNA conformations. |
| Q33348342 | RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a viroid that replicates in the nucleus |
| Q39263059 | Replication of a pathogenic non-coding RNA increases DNA methylation in plants associated with a bromodomain-containing viroid-binding protein |
| Q91604973 | Silencing of transcription factor encoding gene StTCP23 by small RNAs derived from the virulence modulating region of potato spindle tuber viroid is associated with symptom development in potato |
| Q37587009 | Small RNA-mediated regulation of host-pathogen interactions |
| Q34261434 | Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo |
| Q41923126 | Structural differences within the loop E motif imply alternative mechanisms of viroid processing |
| Q35024188 | Tertiary structural and functional analyses of a viroid RNA motif by isostericity matrix and mutagenesis reveal its essential role in replication |
| Q35950434 | Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking |
| Q39181215 | The Arabidopsis tandem zinc finger protein AtTZF1 affects ABA- and GA-mediated growth, stress and gene expression responses |
| Q41955730 | The RNA strands of the plus and minus polarities of peach latent mosaic viroid fold into different structures |
| Q55085341 | Time-Course Microarray Analysis Reveals Differences between Transcriptional Changes in Tomato Leaves Triggered by Mild and Severe Variants of Potato Spindle Tuber Viroid. |
| Q83102246 | Two nucleotide positions in the Citrus exocortis viroid RNA associated with symptom expression in Etrog citron but not in experimental herbaceous hosts |
| Q38613324 | Viroid pathogenicity: one process, many faces |
| Q38613337 | Viroid replication: rolling-circles, enzymes and ribozymes |
| Q30316229 | Viroids, infectious long non-coding RNAs with autonomous replication |
| Q21131141 | Viroids: from genotype to phenotype just relying on RNA sequence and structural motifs |
| Q26851921 | Viroids: self-replicating, mobile, and fast-evolving noncoding regulatory RNAs |
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