Comparative transcriptome analysis reveals the mechanism underlying 3,5-dibromo-4-hydroxybenzoate catabolism via a new oxidative-decarboxylation pathway

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Comparative transcriptome analysis reveals the mechanism underlying 3,5-dibromo-4-hydroxybenzoate catabolism via a new oxidative-decarboxylation pathway is …
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scholarly articleQ13442814

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P356DOI10.1128/AEM.02467-17
P932PMC publication ID5835745
P698PubMed publication ID29305508

P50authorYanzheng GaoQ48301005
P2093author name stringYang Mu
Kai Chen
Qing Chen
Jiandong Jiang
Weibin Jia
Shanshan Jian
Xiaoxia Zang
Zhuang Ke
P2860cites workMEGA6: Molecular Evolutionary Genetics Analysis version 6.0Q24498082
Dehalogenation of the herbicides bromoxynil (3,5-dibromo-4-hydroxybenzonitrile) and ioxynil (3,5-diiodino-4-hydroxybenzonitrile) by Desulfitobacterium chlororespiransQ24532027
Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of gamma-hexachlorocyclohexane in Sphingomonas paucimobilisQ24549124
Complete nucleotide sequence and evolutionary significance of a chromosomally encoded naphthalene-degradation lower pathway from Pseudomonas stutzeri AN10.Q42621286
Hydrolysis of benzonitrile herbicides by soil actinobacteria and metabolite toxicityQ43142258
Dioxygenative cleavage of C-methylated hydroquinones and 2,6-dichlorohydroquinone by Pseudomonas sp. HH35.Q43814092
Characterization of a gene cluster encoding the maleylacetate reductase from Ralstonia eutropha 335T, an enzyme recruited for growth with 4-fluorobenzoateQ44758466
Molecular characterization of the enzymes involved in the degradation of a brominated aromatic herbicideQ45053689
Versatile suicide vectors which allow direct selection for gene replacement in gram-negative bacteria.Q50782746
Reductive dehalogenation of 3,5-dibromo-4-hydroxybenzoate by an aerobic strain of Delftia sp. EOB-17.Q51812939
Evidence that pcpA encodes 2,6-dichlorohydroquinone dioxygenase, the ring cleavage enzyme required for pentachlorophenol degradation in Sphingomonas chlorophenolica strain ATCC 39723.Q52571249
Growth of Dehalococcoides mccartyi strain CBDB1 by reductive dehalogenation of brominated benzenes to benzene.Q52887493
Purification and characterization of salicylate hydroxylase from Pseudomonas putida PpG7Q68839115
Gentisate and 3-oxoadipate pathways in the yeast Candida parapsilosis: identification and functional analysis of the genes coding for 3-hydroxybenzoate 6-hydroxylase and 4-hydroxybenzoate 1-hydroxylaseQ83808566
A Monooxygenase from Boreostereum vibrans Catalyzes Oxidative Decarboxylation in a Divergent Vibralactone Biosynthesis PathwayQ89049112
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationQ24627354
A novel NADH-dependent and FAD-containing hydroxylase is crucial for nicotine degradation by Pseudomonas putidaQ24630215
Identification and characterization of catabolic para-nitrophenol 4-monooxygenase and para-benzoquinone reductase from Pseudomonas sp. strain WBC-3Q24642946
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
The neighbor-joining method: a new method for reconstructing phylogenetic treesQ25939010
Crystal structures of two aromatic hydroxylases involved in the early tailoring steps of angucycline biosynthesisQ27646929
Molecular Insight into Substrate Recognition and Catalysis of Baeyer–Villiger Monooxygenase MtmOIV, the Key Frame-Modifying Enzyme in the Biosynthesis of Anticancer Agent MithramycinQ27679838
Uncovering the enzymes that catalyze the final steps in oxytetracycline biosynthesisQ27684486
The catalytic mechanism of decarboxylative hydroxylation of salicylate hydroxylase revealed by crystal structure analysis at 2.5 Å resolutionQ27702893
Fast gapped-read alignment with Bowtie 2Q27860699
Overexpression, purification and characterization of a new salicylate hydroxylase from naphthalene-degrading Pseudomonas sp. strain ND6Q28184715
Flavin dependent monooxygenasesQ28304493
Sequence analysis of a gene cluster involved in metabolism of 2,4,5-trichlorophenoxyacetic acid by Burkholderia cepacia AC1100Q28367682
Characterization of 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA) of Sphingomonas chlorophenolica ATCC 39723Q28377682
Purification and properties of 4-hydroxybenzoate 1-hydroxylase (decarboxylating), a novel flavin adenine dinucleotide-dependent monooxygenase from Candida parapsilosis CBS604Q28379203
SignalP 4.0: discriminating signal peptides from transmembrane regionsQ29547202
PHD: predicting one-dimensional protein structure by profile-based neural networksQ29614390
HTSeq--a Python framework to work with high-throughput sequencing dataQ29614489
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettesQ29615258
Terbinafine resistance mediated by salicylate 1-monooxygenase in Aspergillus nidulans.Q31108109
sal genes determining the catabolism of salicylate esters are part of a supraoperonic cluster of catabolic genes in Acinetobacter sp. strain ADP1.Q33602601
Gene ontology analysis for RNA-seq: accounting for selection biasQ33861598
Novel three-component Rieske non-heme iron oxygenase system catalyzing the N-dealkylation of chloroacetanilide herbicides in sphingomonads DC-6 and DC-2.Q34057223
NAD(P)H:flavin oxidoreductase of Escherichia coli. A ferric iron reductase participating in the generation of the free radical of ribonucleotide reductaseQ34173456
Anaerobic microbial dehalogenationQ34359365
Evidence that the transcription activator encoded by the Pseudomonas putida nahR gene is evolutionarily related to the transcription activators encoded by the Rhizobium nodD genesQ36175629
Comparison of Four Comamonas Catabolic Plasmids Reveals the Evolution of pBHB To Catabolize HaloaromaticsQ36631257
Microbial degradation of the benzonitrile herbicides dichlobenil, bromoxynil and ioxynil in soil and subsurface environments--insights into degradation pathways, persistent metabolites and involved degrader organismsQ36995677
NahW, a novel, inducible salicylate hydroxylase involved in mineralization of naphthalene by Pseudomonas stutzeri AN10.Q39495095
Expanding the set of rhodococcal Baeyer-Villiger monooxygenases by high-throughput cloning, expression and substrate screeningQ39667717
Genetic and biochemical characterization of a 2,4,6-trichlorophenol degradation pathway in Ralstonia eutropha JMP134.Q39679593
Purification and characterization of a novel 3-chlorobenzoate-reductive dehalogenase from the cytoplasmic membrane of Desulfomonile tiedjei DCB-1.Q39838215
Cloning and expression in Escherichia coli of a Klebsiella ozaenae plasmid-borne gene encoding a nitrilase specific for the herbicide bromoxynilQ39955969
A Two-Component para-Nitrophenol Monooxygenase Initiates a Novel 2-Chloro-4-Nitrophenol Catabolism Pathway in Rhodococcus imtechensis RKJ300.Q41124153
The Structure of the Antibiotic Deactivating, N-hydroxylating Rifampicin Monooxygenase.Q42281328
An unexpected gene cluster for downstream degradation of alkylphenols in Sphingomonas sp. strain TTNP3.Q42609002
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
P577publication date2018-01-05
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titleComparative transcriptome analysis reveals the mechanism underlying 3,5-dibromo-4-hydroxybenzoate catabolism via a new oxidative-decarboxylation pathway

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