scholarly article | Q13442814 |
P50 | author | Johannes Kästner | Q57004811 |
P2860 | cites work | Canonical dynamics: Equilibrium phase-space distributions | Q21709091 |
λ-Dynamics free energy simulation methods | Q27489387 | ||
All-atom empirical potential for molecular modeling and dynamics studies of proteins | Q27860468 | ||
Some applications of the transition state method to the calculation of reaction velocities, especially in solution | Q29013030 | ||
QM/MM Free-Energy Perturbation Compared to Thermodynamic Integration and Umbrella Sampling: Application to an Enzymatic Reaction | Q29396026 | ||
Statistically optimal analysis of samples from multiple equilibrium states | Q30438437 | ||
Reconstructing potential energy functions from simulated force-induced unbinding processes | Q33907359 | ||
Dynamic strength of molecular adhesion bonds | Q33915225 | ||
Molecular dynamics study of unbinding of the avidin-biotin complex | Q33915230 | ||
Escaping free-energy minima | Q34151010 | ||
Artificial reaction coordinate "tunneling" in free-energy calculations: the catalytic reaction of RNase H. | Q34994275 | ||
Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force | Q36793608 | ||
Basic ingredients of free energy calculations: a review | Q37662435 | ||
Free energy via molecular simulation: applications to chemical and biomolecular systems | Q38648060 | ||
Bimolecular reaction rates from ring polymer molecular dynamics | Q39981374 | ||
Implementation of umbrella integration within the framework of the empirical valence bond approach | Q43157992 | ||
Umbrella integration in two or more reaction coordinates | Q45255142 | ||
Calculation of conformation-dependent biomolecular forces. | Q50867834 | ||
Theory of a systematic computational error in free energy differences. | Q52029803 | ||
Bridging the gap between thermodynamic integration and umbrella sampling provides a novel analysis method: "Umbrella integration". | Q52994015 | ||
Comparing measures of sample skewness and kurtosis | Q55878625 | ||
The Activated Complex in Chemical Reactions | Q56672415 | ||
QUASI: A general purpose implementation of the QM/MM approach and its application to problems in catalysis | Q56991637 | ||
Umbrella sampling | Q57229941 | ||
Analysis of the statistical error in umbrella sampling simulations by umbrella integration | Q57397930 | ||
Fast-growth thermodynamic integration: Error and efficiency analysis | Q57875225 | ||
P433 | issue | 23 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 234102 | |
P577 | publication date | 2012-06-01 | |
P1433 | published in | Journal of Chemical Physics | Q900472 |
P1476 | title | Umbrella integration with higher-order correction terms. | |
P478 | volume | 136 |
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Q51340438 | An algorithm to find minimum free-energy paths using umbrella integration. |
Q38986183 | Enhancement of canonical sampling by virtual-state transitions. |
Q47658579 | Multi-dimensional virtual system introduced to enhance canonical sampling |
Q51109755 | Nudged-elastic band used to find reaction coordinates based on the free energy. |
Q37549538 | Roadmaps through free energy landscapes calculated using the multi-dimensional vFEP approach |
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