case report | Q2782326 |
scholarly article | Q13442814 |
P6179 | Dimensions Publication ID | 1100748513 |
P356 | DOI | 10.1186/S40793-017-0306-7 |
P932 | PMC publication ID | 5796565 |
P698 | PubMed publication ID | 29435100 |
P50 | author | Tomas Cajthaml | Q51504012 |
Tomas Macek | Q54852007 | ||
Ondrej Uhlik | Q56635677 | ||
Michal Strejček | Q115247738 | ||
Jáchym Šuman | Q119521768 | ||
P2093 | author name string | Serena Fraraccio | |
Hynek Strnad | |||
Miluse Hradilova | |||
Jakub Ridl | |||
Andrea Zubrova | |||
P2860 | cites work | The COG database: an updated version includes eukaryotes | Q21284294 |
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya | Q22066209 | ||
The neighbor-joining method: a new method for reconstructing phylogenetic trees | Q25939010 | ||
Confidence Limits on Phylogenies: an Approach using the Bootstrap | Q26778379 | ||
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences | Q27860580 | ||
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes | Q27860838 | ||
Pseudomonas alcaliphila sp. nov., a novel facultatively psychrophilic alkaliphile isolated from seawater | Q28185463 | ||
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation | Q28603064 | ||
Pseudomonads Rule Degradation of Polyaromatic Hydrocarbons in Aerated Sediment | Q28607238 | ||
NCBI prokaryotic genome annotation pipeline | Q28828718 | ||
SignalP 4.0: discriminating signal peptides from transmembrane regions | Q29547202 | ||
Validation List no. 103: Validation of publication of new names and new combinations previously effectively published outside the IJSEM | Q45316120 | ||
Bacterial metabolism of polychlorinated biphenyls | Q46441885 | ||
Functional analyses of Pseudomonas putida benzoate transporters expressed in the yeast Saccharomyces cerevisiae | Q46441965 | ||
Pseudomonas oleovorans subsp. lubricantis subsp. nov., and reclassification of Pseudomonas pseudoalcaligenes ATCC 17440T as later synonym of Pseudomonas oleovorans ATCC 8062 T. | Q48066967 | ||
Broad substrate specificity of naphthalene- and biphenyl-utilizing bacteria | Q74086694 | ||
Field evaluation of in situ aerobic cometabolism of trichloroethylene and three dichloroethylene isomers using phenol and toluene as the primary substrates | Q83323731 | ||
GenBank | Q84894623 | ||
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets | Q29616345 | ||
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes | Q29616745 | ||
Pseudomonas chengduensis sp. nov., isolated from landfill leachate | Q30666042 | ||
Circular genome visualization and exploration using CGView | Q31120465 | ||
Impacts of heavy metal contamination and phytoremediation on a microbial community during a twelve-month microcosm experiment | Q33497585 | ||
Transmissible Plasmid Coding Early Enzymes of Naphthalene Oxidation in Pseudomonas putida | Q33784915 | ||
Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199. | Q33853412 | ||
Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1 | Q33889682 | ||
Dual-bioaugmentation strategy to enhance remediation of cocontaminated soil | Q33989888 | ||
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida | Q33994918 | ||
Hydrocarbon-degrading bacteria and the bacterial community response in gulf of Mexico beach sands impacted by the deepwater horizon oil spill | Q34031002 | ||
Biodegradation of PCBs by ligninolytic fungi and characterization of the degradation products. | Q34271919 | ||
The Pfam protein families database: towards a more sustainable future | Q34505322 | ||
Polychlorinated biphenyl (PCB)-degrading bacteria associated with trees in a PCB-contaminated site | Q34570615 | ||
The Transporter Classification Database (TCDB): recent advances | Q34674354 | ||
Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase | Q34696950 | ||
PcaK, a high-affinity permease for the aromatic compounds 4-hydroxybenzoate and protocatechuate from Pseudomonas putida | Q35627831 | ||
benK encodes a hydrophobic permease-like protein involved in benzoate degradation by Acinetobacter sp. strain ADP1. | Q35630694 | ||
Metabolism of and inhibition by chlorobenzoates in Pseudomonas putida P111. | Q35727715 | ||
Biphenyl dioxygenases: functional versatilities and directed evolution | Q35855080 | ||
Environmental genomics: exploring the unmined richness of microbes to degrade xenobiotics | Q35865801 | ||
Oxidation of substituted phenols by Pseudomonas putida F1 and Pseudomonas sp. strain JS6 | Q36070418 | ||
Degradation of trichloroethylene by toluene dioxygenase in whole-cell studies with Pseudomonas putida F1 | Q36070872 | ||
The Staden sequence analysis package | Q36823231 | ||
KEGG: new perspectives on genomes, pathways, diseases and drugs | Q37556832 | ||
UniProt: the universal protein knowledgebase | Q37556842 | ||
Pseudomonas genomes: diverse and adaptable | Q37848453 | ||
ZapE is a novel cell division protein interacting with FtsZ and modulating the Z-ring dynamics | Q38343804 | ||
A chromosomally based tod-luxCDABE whole-cell reporter for benzene, toluene, ethybenzene, and xylene (BTEX) sensing | Q39561888 | ||
Biodegradation of petroleum hydrocarbons by psychrotrophic Pseudomonas strains possessing both alkane (alk) and naphthalene (nah) catabolic pathways. | Q39803054 | ||
Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes | Q39965430 | ||
The Main Lines of the Natural Bacterial System | Q40724111 | ||
The beta-ketoadipate pathway and the biology of self-identity | Q41199628 | ||
Secondary compound hypothesis revisited: Selected plant secondary metabolites promote bacterial degradation of cis-1,2-dichloroethylene (cDCE). | Q41436357 | ||
Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707 | Q42608900 | ||
Metabolic characterization and genes for the conversion of biphenyl in Dyella ginsengisoli LA-4. | Q43975242 | ||
Toxicity assessment of mono-substituted benzenes and phenols using a Pseudomonas initial oxygen uptake assay | Q45272998 | ||
P921 | main subject | genomics | Q222046 |
whole genome sequencing | Q2068526 | ||
Pseudomonas alcaliphila | Q7255000 | ||
P304 | page(s) | 3 | |
P577 | publication date | 2018-02-01 | |
P1433 | published in | Standards in genomic sciences | Q22965585 |
P1476 | title | Complete genome sequence of Pseudomonas alcaliphila JAB1 (=DSM 26533), a versatile degrader of organic pollutants | |
P478 | volume | 13 |
Q89634399 | Assessment of Biodegradation Efficiency of Polychlorinated Biphenyls (PCBs) and Petroleum Hydrocarbons (TPH) in Soil Using Three Individual Bacterial Strains and Their Mixed Culture |
Q92772823 | Novel PCB-degrading Rhodococcus strains able to promote plant growth for assisted rhizoremediation of historically polluted soils |
Q92857597 | Time-Dependent Changes in Morphostructural Properties and Relative Abundances of Contributors in Pleurotus ostreatus/Pseudomonas alcaliphila Mixed Biofilms |
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