Biomarkers' Responses to Reductive Dechlorination Rates and Oxygen Stress in Bioaugmentation Culture KB-1TM.

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Biomarkers' Responses to Reductive Dechlorination Rates and Oxygen Stress in Bioaugmentation Culture KB-1TM. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3390/MICROORGANISMS6010013
P932PMC publication ID5874627
P698PubMed publication ID29419787

P50authorSage T HellerstedtQ87728019
Annette R RoweQ60485801
Gretchen L W HeavnerQ87728016
P2093author name stringRuth E Richardson
Cresten B Mansfeldt
Garrett E Debs
P2860cites workComparative evaluation of chloroethene dechlorination to ethene by Dehalococcoides-like microorganismsQ45109210
Concurrent ethene generation and growth of Dehalococcoides containing vinyl chloride reductive dehalogenase genes during an enhanced reductive dechlorination field demonstration.Q46143388
Isolation and characterization of Dehalococcoides sp. strain FL2, a trichloroethene (TCE)- and 1,2-dichloroethene-respiring anaerobe.Q46653979
Correlation of respiratory gene expression levels and pseudo-steady-state PCE respiration rates in Dehalococcoides ethenogenesQ46745994
Molecular biomarker-based biokinetic modeling of a PCE-dechlorinating and methanogenic mixed cultureQ46805058
Survival of Vinyl Chloride Respiring Dehalococcoides mccartyi under Long-Term Electron Donor LimitationQ47350656
Relating chloroethene respiration rates in Dehalococcoides to protein and mRNA biomarkers.Q47367490
Chloroethene degradation and expression of Dehalococcoides dehalogenase genes in cultures originating from Yangtze sedimentsQ47811817
Microbial composition of chlorinated ethene-degrading cultures dominated by DehalococcoidesQ48083341
Identification of a multi-protein reductive dehalogenase complex in Dehalococcoides mccartyi strain CBDB1 suggests a protein-dependent respiratory electron transport chain obviating quinone involvementQ48271348
Growth and yields of dechlorinators, acetogens, and methanogens during reductive dechlorination of chlorinated ethenes and dihaloelimination of 1 ,2-dichloroethaneQ48605873
Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiaeQ57997776
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein databaseQ27861106
Isolation of a bacterium that reductively dechlorinates tetrachloroethene to etheneQ28239702
Quantitative real-time RT-PCR data analysis: current concepts and the novel "gene expression's CT difference" formulaQ28263575
Microbial Community Response of an Organohalide Respiring Enrichment Culture to Permanganate OxidationQ28547041
Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysisQ30811004
Quantifying genes and transcripts to assess the in situ physiology of "Dehalococcoides" spp. in a trichloroethene-contaminated groundwater siteQ33322994
Monitoring abundance and expression of "Dehalococcoides" species chloroethene-reductive dehalogenases in a tetrachloroethene-dechlorinating flow columnQ33357278
An internal reference technique for accurately quantifying specific mRNAs by real-time PCR with application to the tceA reductive dehalogenase gene.Q33884655
Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and EuropeQ34099848
Transcriptional expression of the tceA gene in a Dehalococcoides-containing microbial enrichmentQ34143331
Tandem Mass Tags: A Novel Quantification Strategy for Comparative Analysis of Complex Protein Mixtures by MS/MSQ34192662
Meta-analyses of Dehalococcoides mccartyi strain 195 transcriptomic profiles identify a respiration rate-related gene expression transition point and interoperon recruitment of a key oxidoreductase subunitQ34261225
Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating communityQ34347988
Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to-ethene-respiring Dehalococcoides isolateQ34432370
Temporal expression of respiratory genes in an enrichment culture containing Dehalococcoides ethenogenesQ34973967
Comparative proteomics of Dehalococcoides spp. reveals strain-specific peptides associated with activityQ35633957
Inferring Gene Networks for Strains of Dehalococcoides Highlights Conserved Relationships between Genes Encoding Core Catabolic and Cell-Wall Structural ProteinsQ36187481
MASIC: a software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) featuresQ36796026
Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databasesQ37209690
Characterization of a highly enriched dehalococcoides-containing culture that grows on vinyl chloride and trichloroetheneQ37552809
Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distributionQ39305144
Reductive dechlorination of chlorinated ethenes and 1, 2-dichloroethane by "Dehalococcoides ethenogenes" 195.Q39482593
Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespirationQ39958314
Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing culturesQ40717124
Abundance and activity of vinyl chloride (VC)-oxidizing bacteria in a dilute groundwater VC plume biostimulated with oxygen and etheneQ40742989
Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacteriumQ42164123
Expression of reductive dehalogenase genes in Dehalococcoides ethenogenes strain 195 growing on tetrachloroethene, trichloroethene, or 2,3-dichlorophenol.Q42432595
The Hydrogenase Chip: a tiling oligonucleotide DNA microarray technique for characterizing hydrogen-producing and -consuming microbes in microbial communities.Q42574508
Identity and Substrate Specificity of Reductive Dehalogenases Expressed in Dehalococcoides-Containing Enrichment Cultures Maintained on Different Chlorinated EthenesQ42579257
Design and verification of a pangenome microarray oligonucleotide probe set for Dehalococcoides spp.Q42849491
Sustained aerobic oxidation of vinyl chloride at low oxygen concentrationsQ43187214
Comparison of anaerobic dechlorinating enrichment cultures maintained on tetrachloroethene, trichloroethene, cis-dichloroethene and vinyl chlorideQ43358685
A conceptual model linking functional gene expression and reductive dechlorination rates of chlorinated ethenes in clay rich groundwater sediment.Q44460504
Dehalococcoides' gene transcripts as quantitative bioindicators of tetrachloroethene, trichloroethene, and cis-1,2-dichloroethene dehalorespiration ratesQ44531731
Dehalococcoides ethenogenes strain 195 reductively dechlorinates diverse chlorinated aromatic pollutantsQ44867363
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue1
P921main subjectbioaugmentationQ864204
biomarkerQ864574
P577publication date2018-02-08
P1433published inMicroorganismsQ27725360
P1476titleBiomarkers' Responses to Reductive Dechlorination Rates and Oxygen Stress in Bioaugmentation Culture KB-1TM
P478volume6

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cites work (P2860)
Q91971549Detection of Organohalide-Respiring Enzyme Biomarkers at a Bioaugmented TCE-Contaminated Field Site
Q61293872Editorial for Special Issue "Microorganisms for Environmental and Industrial Applications"
Q90981491Impacts of low-temperature thermal treatment on microbial detoxification of tetrachloroethene under continuous flow conditions
Q91609388Structural dynamics and transcriptomic analysis of Dehalococcoides mccartyi within a TCE-Dechlorinating community in a completely mixed flow reactor
Q92092412Targeted detection of Dehalococcoides mccartyi microbial protein biomarkers as indicators of reductive dechlorination activity in contaminated groundwater

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