Transcriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators.

scientific article published on 29 August 2006

Transcriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1152/PHYSIOLGENOMICS.00055.2006
P698PubMed publication ID16940433
P5875ResearchGate publication ID6849175

P2093author name stringHuang H
Surrey S
Addya S
Vadigepalli R
Keller MA
Delgrosso K
Banini B
P2860cites workGadd34 requirement for normal hemoglobin synthesisQ42137693
Delineation of a negative feedback regulatory loop that controls protein translation during endoplasmic reticulum stressQ42163338
Gene expression profiling during erythroid differentiation of K562 cellsQ42649620
Transcription patterning of uncoupled proliferation and differentiation in myelodysplastic bone marrow with erythroid-focused arraysQ43727831
An examination of heme action in gene expression: heme and heme deficiency affect the expression of diverse genes in erythroid k562 and neuronal PC12 cells.Q44013022
PECAM-1 is expressed on hematopoietic stem cells throughout ontogeny and identifies a population of erythroid progenitorsQ44883092
Annexin1 regulates the erythroid differentiation through ERK signaling pathwayQ46481245
Hematopoiesis following disruption of the Pitx2 homeodomain geneQ46928678
Microarray and serial analysis of gene expression analyses identify known and novel transcripts overexpressed in hematopoietic stem cells.Q47255076
Molecular evidence for stem cell function of the slow-dividing fraction among human hematopoietic progenitor cells by genome-wide analysisQ47749134
Differential gene expression underlying the functional distinctions of primary human CD34+ hematopoietic stem and progenitor cells from peripheral blood and bone marrowQ47844841
The kinetic status of hematopoietic stem cell subpopulations underlies a differential expression of genes involved in self-renewal, commitment, and engraftment.Q50974629
Clonal heterogeneity in growth kinetics of CD34+CD38- human cord blood cells in vitro is correlated with gene expression pattern and telomere length.Q51441345
Comparative genome analysis of Campylobacter jejuni using whole genome DNA microarrays.Q51645764
Targeted disruption of the activating transcription factor 4 gene results in severe fetal anemia in mice.Q52545083
Transcriptional profiling of human hematopoiesis during in vitro lineage-specific differentiation.Q54658974
Silhouettes: A graphical aid to the interpretation and validation of cluster analysisQ57380611
Empirical Bayes Analysis of a Microarray ExperimentQ58618328
Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinationsQ59145982
GATA-1 forms distinct activating and repressive complexes in erythroid cellsQ24303958
Oncogenic transcription factor Evi1 regulates hematopoietic stem cell proliferation through GATA-2 expressionQ24529138
Activation of EVI1 gene expression in human acute myelogenous leukemias by translocations spanning 300-400 kilobases on chromosome band 3q26Q24561670
A gene atlas of the mouse and human protein-encoding transcriptomesQ24568043
MATCH: A tool for searching transcription factor binding sites in DNA sequencesQ24677633
A sequence-based identification of the genes detected by probesets on the Affymetrix U133 plus 2.0 arrayQ24791864
Determination of the differentially expressed genes in microarray experiments using local FDRQ24795812
Functional analysis of human hematopoietic stem cell gene expression using zebrafishQ24814490
Systematic determination of genetic network architectureQ28138580
Identification of binding sites of EVI1 in mammalian cellsQ28260755
Global regulation of erythroid gene expression by transcription factor GATA-1Q28275891
GATA factors lie upstream of Nkx 2.5 in the transcriptional regulatory cascade that effects cardiogenesisQ28506898
CD41 expression defines the onset of primitive and definitive hematopoiesis in the murine embryoQ28510397
Feedback inhibition of the unfolded protein response by GADD34-mediated dephosphorylation of eIF2alphaQ28512201
The erythroid phenotype of EKLF-null mice: defects in hemoglobin metabolism and membrane stabilityQ28591101
TRANSFAC: transcriptional regulation, from patterns to profilesQ29547394
Analysis of gene expression data using self-organizing mapsQ31324838
Systems analysis of circadian time-dependent neuronal epidermal growth factor receptor signalingQ33247231
Biophysical characterization of the alpha-globin binding protein alpha-hemoglobin stabilizing proteinQ34145632
Expression of Pitx2 in stromal cells is required for normal hematopoiesisQ34455431
Hematopoietic differentiation of human embryonic stem cells progresses through sequential hematoendothelial, primitive, and definitive stages resembling human yolk sac developmentQ35847904
Loss of erythropoietin responsiveness in erythroid progenitors due to expression of the Evi-1 myeloid-transforming geneQ36413795
Protein-DNA array-based identification of transcription factor activities regulated by interaction with the glucocorticoid receptorQ38339051
Induction of C/EBPalpha activity alters gene expression and differentiation of human CD34+ cells.Q38361476
Chronic alcohol exposure alters transcription broadly in a key integrative brain nucleus for homeostasis: the nucleus tractus solitariusQ38519733
EVI1 induces myelodysplastic syndrome in miceQ39951095
Hematopoietic progenitor cells and cellular microenvironment: behavioral and molecular changes upon interactionQ40409977
Overexpression of transglutaminase 2 accelerates the erythroid differentiation of human chronic myelogenous leukemia K562 cell line through PI3K/Akt signaling pathwayQ40489594
Erythroid-induced commitment of K562 cells results in clusters of differentially expressed genes enriched for specific transcription regulatory elementsQ40536059
Molecular signatures of self-renewal, differentiation, and lineage choice in multipotential hemopoietic progenitor cells in vitroQ40581709
PAINT: A Promoter Analysis and Interaction Network Generation Tool for Gene Regulatory Network IdentificationQ40622156
Preparation and characterization of invertebrate globin complexesQ40678101
P433issue1
P304page(s)114-128
P577publication date2006-08-29
P1433published inPhysiological GenomicsQ2506446
P1476titleTranscriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators.
P478volume28

Reverse relations

cites work (P2860)
Q37151202Alternative pre-mRNA splicing switches modulate gene expression in late erythropoiesis.
Q34834133Association between active genes occurs at nuclear speckles and is modulated by chromatin environment
Q28391523CRNDE: A Long Non-Coding RNA Involved in CanceR, Neurobiology, and DEvelopment
Q34248320Characterization of the transcriptome profiles related to globin gene switching during in vitro erythroid maturation
Q58781785Comparison of gene expression profiles between human erythroid cells derived from fetal liver and adult peripheral blood
Q38622483Control of intestinal stem cell function and proliferation by mitochondrial pyruvate metabolism
Q38198870Democratizing systems immunology with modular transcriptional repertoire analyses
Q33991726Developmental transcriptome analysis of human erythropoiesis.
Q41041947Differential gene expression analysis in early and late erythroid progenitor cells in β-thalassaemia
Q37350017Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis.
Q36171095Distinct gene expression program dynamics during erythropoiesis from human induced pluripotent stem cells compared with adult and cord blood progenitors
Q33452882Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Q37969335Ex-vivo expansion of red blood cells: how real for transfusion in humans?
Q41575402Expression of ABCG2 (BCRP) in mouse models with enhanced erythropoiesis
Q33538888Functional annotation of novel lineage-specific genes using co-expression and promoter analysis
Q33883840Gene transcript abundance profiles distinguish Kawasaki disease from adenovirus infection
Q33697238Global transcriptome analyses of human and murine terminal erythroid differentiation
Q38653999Hierarchical role for transcription factors and chromatin structure in genome organization along adipogenesis.
Q37174211In silico promoters: modelling of cis-regulatory context facilitates target predictio
Q42287793Modeling dynamic functional relationship networks and application to ex vivo human erythroid differentiation
Q34270548Mutations in the mechanotransduction protein PIEZO1 are associated with hereditary xerocytosis
Q36916087Novel hematopoietic target genes in the NRF2-mediated transcriptional pathway
Q38640493Novel methods for studying normal and disordered erythropoiesis
Q24624628Ontogeny of erythroid gene expression
Q42174972PathCluster: a framework for gene set-based hierarchical clustering
Q40896161Positive receptor feedback during lineage commitment can generate ultrasensitivity to ligand and confer robustness to a bistable switch
Q42330746SMIM1 variants rs1175550 and rs143702418 independently modulate Vel blood group antigen expression.
Q41824565Secreted Compounds of the Probiotic Bacillus clausii Strain O/C Inhibit the Cytotoxic Effects Induced by Clostridium difficile and Bacillus cereus Toxins.
Q36584835Simvastatin and t-butylhydroquinone suppress KLF1 and BCL11A gene expression and additively increase fetal hemoglobin in primary human erythroid cells
Q36015223Spry1 as a novel regulator of erythropoiesis, EPO/EPOR target, and suppressor of JAK2.
Q24293178Targets of the Tal1 transcription factor in erythrocytes: E2 ubiquitin conjugase regulation by Tal1
Q28565768Temporal and functional profile of the transcriptional regulatory network in the early regenerative response to partial hepatectomy in the rat
Q34291437The effect of erythropoietin on normal and neoplastic cells
Q37851826The p53 target Wig-1: a regulator of mRNA stability and stem cell fate?
Q37471843Transcriptional response in the peripheral blood of patients infected with Salmonella enterica serovar Typhi
Q28589759Translocator protein 2 is involved in cholesterol redistribution during erythropoiesis

Search more.