scholarly article | Q13442814 |
P6179 | Dimensions Publication ID | 1101298914 |
P356 | DOI | 10.1038/S41396-018-0083-3 |
P932 | PMC publication ID | 6018701 |
P698 | PubMed publication ID | 29515170 |
P50 | author | Thomas Sicheritz-Ponten | Q28741758 |
Barth F Smets | Q39274431 | ||
Arnaud Dechesne | Q47423995 | ||
Anders Gorm Pedersen | Q56510441 | ||
Alejandro Palomo | Q58122202 | ||
Jane Fowler | Q82271377 | ||
P2093 | author name string | S Jane Fowler | |
P2860 | cites work | Relaxed phylogenetics and dating with confidence | Q21146068 |
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes | Q21284200 | ||
Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea | Q24676726 | ||
MrBayes 3: Bayesian phylogenetic inference under mixed models | Q26778438 | ||
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega | Q27860809 | ||
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability | Q27860817 | ||
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida | Q28354983 | ||
A biochemical approach to study the role of the terminal oxidases in aerobic respiration in Shewanella oneidensis MR-1 | Q28539021 | ||
BEAST 2: a software platform for Bayesian evolutionary analysis | Q28660145 | ||
Nitrospira marina gen. nov. sp. nov.: a chemolithotrophic nitrite-oxidizing bacterium | Q29394046 | ||
TimeTree: a public knowledge-base of divergence times among organisms | Q29547188 | ||
Prodigal: prokaryotic gene recognition and translation initiation site identification | Q29547611 | ||
Evolution in bacteria: evidence for a universal substitution rate in cellular genomes | Q29618187 | ||
In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants | Q30756686 | ||
Anvi'o: an advanced analysis and visualization platform for 'omics data | Q31010932 | ||
Toward almost closed genomes with GapFiller | Q33353810 | ||
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria | Q34067963 | ||
genoPlotR: comparative gene and genome visualization in R | Q34110403 | ||
The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer | Q34329676 | ||
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes | Q34346732 | ||
NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing Nitrospira. | Q34377238 | ||
A Bayesian method for analyzing lateral gene transfer. | Q34406222 | ||
Oxygenated complex of cytochrome bd from Escherichia coli: stability and photolability. | Q34441256 | ||
Cyanate as an energy source for nitrifiers | Q34487384 | ||
Complete nitrification by Nitrospira bacteria | Q34503171 | ||
Complete nitrification by a single microorganism | Q34503178 | ||
Functionally relevant diversity of closely related Nitrospira in activated sludge. | Q34771327 | ||
Wolinella succinogenes quinol:fumarate reductase-2.2-A resolution crystal structure and the E-pathway hypothesis of coupled transmembrane proton and electron transfer | Q34985076 | ||
MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences | Q35109643 | ||
The evolution of respiratory chain complex I from a smaller last common ancestor consisting of 11 protein subunits | Q35130054 | ||
The cytochrome bd respiratory oxygen reductases | Q35209505 | ||
MeDuSa: a multi-draft based scaffolder. | Q35587082 | ||
Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira | Q36056928 | ||
Non-HKD phospholipase D enzymes: new players in phosphatidic acid signaling? | Q36226844 | ||
Genomic and metagenomic surveys of hydrogenase distribution indicate H2 is a widely utilised energy source for microbial growth and survival | Q36756517 | ||
Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system | Q36768325 | ||
Diversity, abundance and activity of ammonia-oxidizing microorganisms in fine particulate matter. | Q37492928 | ||
Freshwater Recirculating Aquaculture System Operations Drive Biofilter Bacterial Community Shifts around a Stable Nitrifying Consortium of Ammonia-Oxidizing Archaea and Comammox Nitrospira | Q37611711 | ||
Nucleosomes accelerate transcription factor dissociation. | Q37631853 | ||
Metabolic characteristics and importance of the universal methionine salvage pathway recycling methionine from 5'-methylthioadenosine. | Q37641189 | ||
The stressosome: molecular architecture of a signalling hub. | Q37775649 | ||
Methionine salvage and S-adenosylmethionine: essential links between sulfur, ethylene and polyamine biosynthesis. | Q38093712 | ||
Cytochrome bd oxidase and bacterial tolerance to oxidative and nitrosative stress | Q38184237 | ||
AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment | Q38287479 | ||
Metagenomic Evidence for the Presence of Comammox Nitrospira-Like Bacteria in a Drinking Water System. | Q38379560 | ||
Comammox in drinking water systems. | Q38846739 | ||
A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria. | Q38855546 | ||
Phylogenomic analysis and predicted physiological role of the proton-translocating NADH:quinone oxidoreductase (complex I) across bacteria | Q39018140 | ||
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony | Q39788032 | ||
Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp. | Q39809771 | ||
Copper Hypersensitivity and Uptake in Pseudomonas syringae Containing Cloned Components of the Copper Resistance Operon | Q39857609 | ||
Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters | Q39939880 | ||
Different Functions of Phylogenetically Distinct Bacterial Complex I Isozymes | Q40034841 | ||
Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages | Q40880241 | ||
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes | Q40936712 | ||
Genome-Enabled Insights into the Ecophysiology of the Comammox Bacterium "Candidatus Nitrospira nitrosa" | Q41186875 | ||
An alkaline phosphatase/phosphodiesterase, PhoD, induced by salt stress and secreted out of the cells of Aphanothece halophytica, a halotolerant cyanobacterium | Q41817540 | ||
Transcriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration in Rhodobacter sphaeroides 2.4.1. | Q41911687 | ||
Dissection of ammonium uptake systems in Corynebacterium glutamicum: mechanism of action and energetics of AmtA and AmtB. | Q42063280 | ||
Heme concentration dependence and metalloporphyrin inhibition of the system I and II cytochrome c assembly pathways | Q42089689 | ||
In vivo functional characterization of the Escherichia coli ammonium channel AmtB: evidence for metabolic coupling of AmtB to glutamine synthetase | Q42109194 | ||
Enrichment and physiological characterization of a novel Nitrospira-like bacterium obtained from a marine sponge | Q42735048 | ||
Phosphorus and nitrogen profile measurements to locate phosphorus limitation in a fixed bed filter | Q43311665 | ||
Nitrite concentration influences the population structure of Nitrospira-like bacteria | Q43337659 | ||
Copper deficiency can limit nitrification in biological rapid sand filters for drinking water production | Q43346859 | ||
Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation | Q44602896 | ||
Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle. | Q46315566 | ||
SylvX: a viewer for phylogenetic tree reconciliations | Q46646719 | ||
Selective enrichment and molecular characterization of a previously uncultured Nitrospira-like bacterium from activated sludge | Q46944612 | ||
Nitrospira community composition in nitrifying reactors operated with two different dissolved oxygen levels. | Q47376486 | ||
An outer-membrane porin inducible by short-chain amides and urea in the methylotrophic bacterium Methylophilus methylotrophus | Q48047775 | ||
Transport characteristics of mammalian Rh and Rh glycoproteins expressed in heterologous systems. | Q50651385 | ||
Why is metabolic labour divided in nitrification? | Q51223837 | ||
Variability of the transporter gene complement in ammonia-oxidizing archaea. | Q51413937 | ||
Reaction of Mycobacterium tuberculosis truncated hemoglobin O with hydrogen peroxide: evidence for peroxidatic activity and formation of protein-based radicals | Q79544836 | ||
Functional and physiological evidence for a rhesus-type ammonia transporter in Nitrosomonas europaea | Q80562676 | ||
Phosphorus limitation in nitrifying groundwater filters | Q83157391 | ||
Expressions of alkaline phosphatase genes during phosphate starvation are under positive influences of multiple cell wall hydrolase genes in Bacillus subtilis | Q89303466 | ||
P433 | issue | 7 | |
P921 | main subject | comparative genomics | Q1147112 |
niche differentiation | Q3027700 | ||
P304 | page(s) | 1779-1793 | |
P577 | publication date | 2018-03-07 | |
P1433 | published in | The ISME Journal | Q7741240 |
P1476 | title | Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira. | |
P478 | volume | 12 |
Q90406966 | Activity and Metabolic Versatility of Complete Ammonia Oxidizers in Full-Scale Wastewater Treatment Systems |
Q96577377 | Comammox Nitrospira within the Yangtze River continuum: community, biogeography, and ecological drivers |
Q58555212 | Complete nitrification: insights into the ecophysiology of comammox Nitrospira |
Q90206541 | Controls and Adaptive Management of Nitrification in Agricultural Soils |
Q61805098 | Design and Assessment of Species-Level qPCR Primers Targeting Comammox |
Q102059099 | Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification |
Q41186875 | Genome-Enabled Insights into the Ecophysiology of the Comammox Bacterium "Candidatus Nitrospira nitrosa" |
Q93216952 | High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant |
Q104559388 | Hydroxylamine and the nitrogen cycle: A review |
Q91281786 | Long solids retention times and attached growth phase favor prevalence of comammox bacteria in nitrogen removal systems |
Q64097768 | Low yield and abiotic origin of NO formed by the complete nitrifier Nitrospira inopinata |
Q98563446 | Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters |
Q92155108 | Metagenomic recovery of two distinct comammox Nitrospira from the terrestrial subsurface |
Q104484316 | N2O and NOy production by the comammox bacterium Nitrospira inopinata in comparison with canonical ammonia oxidizers |
Q98187105 | Nutrient removal performance and microbiome of an energy-efficient reciprocation MLE-MBR operated under hypoxic conditions |
Q104515815 | Stronger environmental adaptation of rare rather than abundant bacterioplankton in response to dredging in eutrophic Lake Nanhu (Wuhan, China) |
Q58764854 | The Genomic Potentials of NOB and Comammox in River Sediment Are Impacted by Native Freshwater Mussels |
Search more.