Primordial origin and diversification of plasmids in Lyme disease agent bacteria.

scientific article published on 27 March 2018

Primordial origin and diversification of plasmids in Lyme disease agent bacteria. is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1101779920
P356DOI10.1186/S12864-018-4597-X
P932PMC publication ID5870499
P698PubMed publication ID29580205

P50authorClaire M. FraserQ3678978
Weigang QiuQ41044925
Benjamin J. LuftQ51739994
Emmanuel F MongodinQ56787109
P2093author name stringSherwood R Casjens
Steven E Schutzer
Lia Di
Saymon Akther
P2860cites workA phylogenomic and molecular signature based approach for characterization of the phylum Spirochaetes and its major clades: proposal for a taxonomic revision of the phylumQ21131121
MUSCLE: a multiple sequence alignment method with reduced time and space complexityQ21284290
Comparative analysis of the Borrelia garinii genomeQ22065986
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferiQ22122357
Lyme disease-a tick-borne spirochetosis?Q22242252
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typingQ24564226
Borrelia valaisiana in cerebrospinal fluidQ24604035
Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmaniiQ24611225
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
First isolation of Borrelia lusitaniae from a human patientQ24624462
Outer surface proteins E and F of Borrelia burgdorferi, the agent of Lyme diseaseQ24676083
Crystal structure of Lyme disease antigen outer surface protein A complexed with an FabQ27735918
Clustal W and Clustal X version 2.0Q27860517
Multifunctional and Redundant Roles of Borrelia burgdorferi Outer Surface Proteins in Tissue Adhesion, Colonization, and Complement EvasionQ28067065
A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferiQ28144621
Antigenic variation in Lyme disease borreliae by promiscuous recombination of VMP-like sequence cassettesQ28235330
Molecular analysis of linear plasmid-encoded major surface proteins, OspA and OspB, of the Lyme disease spirochaete Borrelia burgdorferiQ28278501
Mugsy: fast multiple alignment of closely related whole genomesQ28300407
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogeniesQ28658397
FastTree 2--approximately maximum-likelihood trees for large alignmentsQ28748616
CD-HIT: accelerated for clustering the next-generation sequencing dataQ29616664
Consensus computational network analysis for identifying candidate outer membrane proteins from Borrelia spirochetesQ30152759
Borrelia chilensis, a new member of the Borrelia burgdorferi sensu lato complex that extends the range of this genospecies in the Southern HemisphereQ30576854
Regulatory protein BBD18 of the lyme disease spirochete: essential role during tick acquisition?Q37687831
Lyme borreliosis: reviewing potential vaccines, clinical aspects and health economicsQ38594410
Phage-mediated horizontal gene transfer of both prophage and heterologous DNA by ϕBB-1, a bacteriophage of Borrelia burgdorferiQ38798883
Distribution of twelve linear extrachromosomal DNAs in natural isolates of Lyme disease spirochetes.Q39587360
Demonstration of cotranscription and 1-methyl-3-nitroso-nitroguanidine induction of a 30-gene operon of Borrelia burgdorferi: evidence that the 32-kilobase circular plasmids are prophagesQ39892227
Division of the genus Borrelia into two genera (corresponding to Lyme disease and relapsing fever groups) reflects their genetic and phenotypic distinctiveness and will lead to a better understanding of these two groups of microbes (Margos et al. (2Q40071138
Chromosome and Linear Plasmid Sequences of a 2015 Human Isolate of the Tick-Borne Relapsing Fever Spirochete, Borrelia turicataeQ40096694
Chromosome and Plasmids of the Tick-Borne Relapsing Fever Agent Borrelia hermsiiQ40101918
Immunological and molecular polymorphisms of OspC, an immunodominant major outer surface protein of Borrelia burgdorferi.Q40267193
Fibronectin binding protein BBK32 of the Lyme disease spirochete promotes bacterial attachment to glycosaminoglycansQ40337641
A 9.0-kilobase-pair circular plasmid of Borrelia burgdorferi encodes an exported protein: evidence for expression only during infection.Q40374453
There is inadequate evidence to support the division of the genus BorreliaQ40418630
BGA66 and BGA71 facilitate complement resistance of Borrelia bavariensis by inhibiting assembly of the membrane attack complex.Q40469829
Identification and molecular characterization of a cyclic-di-GMP effector protein, PlzA (BB0733): additional evidence for the existence of a functional cyclic-di-GMP regulatory network in the Lyme disease spirochete, Borrelia burgdorferi.Q40520299
Telomere exchange between linear replicons of Borrelia burgdorferiQ40909296
NGS population genetics analyses reveal divergent evolution of a Lyme Borreliosis agent in Europe and AsiaQ41233070
Complete Genome Sequencing of Borrelia valaisiana and Borrelia afzelii Isolated from Ixodes persulcatus Ticks in Western SiberiaQ41582043
The BBA01 protein, a member of paralog family 48 from Borrelia burgdorferi, is potentially interchangeable with the channel-forming protein P13Q41669582
Geographic survey of vector ticks (Ixodes scapularis and Ixodes pacificus) for infection with the Lyme disease spirochete, Borrelia burgdorferi.Q41683816
The importance of lizards and small mammals as reservoirs for Borrelia lusitaniae in PortugalQ41712524
Genome Sequence of Borrelia chilensis VA1, a South American Member of the Lyme Borreliosis Group.Q41760680
Identification and functional characterization of complement regulator-acquiring surface protein 1 of the Lyme disease spirochetes Borrelia afzelii and Borrelia gariniiQ41818115
CspA from Borrelia burgdorferi inhibits the terminal complement pathwayQ42016535
Characterization and in vitro reaction properties of 19 unique hairpin telomeres from the linear plasmids of the lyme disease spirocheteQ42118277
BBA70 of Borrelia burgdorferi is a novel plasminogen-binding proteinQ42134729
Natural selection promotes antigenic evolvability.Q42906925
Borrelia burgdorferi infection-associated surface proteins ErpP, ErpA, and ErpC bind human plasminogenQ43215349
Plasmid requirements for infection of ticks by Borrelia burgdorferiQ43219221
Published data do not support the notion that Borrelia valaisiana is human pathogenicQ44978711
Variation in the size of the ospA-containing linear plasmid, but not the linear chromosome, among the three Borrelia species associated with Lyme disease.Q47387360
Borrelia burgdorferi RevA antigen binds host fibronectinQ37256541
Fast, adaptive evolution at a bacterial host-resistance locus: the PFam54 gene array in Borrelia burgdorferiQ37345021
Experimental assessment of the roles of linear plasmids lp25 and lp28-1 of Borrelia burgdorferi throughout the infectious cycleQ37523844
Toward a Complete North American Borrelia miyamotoi GenomeQ37621773
BBE02 disruption mutants of Borrelia burgdorferi B31 have a highly transformable, infectious phenotypeQ37623542
Identification of a 47 kDa fibronectin-binding protein expressed by Borrelia burgdorferi isolate B31.Q47988454
Molecular analysis of the channel-forming protein P13 and its paralogue family 48 from different Lyme disease Borrelia speciesQ48016224
Telomeres of the linear chromosomes of Lyme disease spirochaetes: nucleotide sequence and possible exchange with linear plasmid telomeresQ48041628
The Borrelia burgdorferi circular plasmid cp26: conservation of plasmid structure and targeted inactivation of the ospC gene.Q48047520
Evidence for lateral transfer and recombination in OspC variation in Lyme disease BorreliaQ48069987
Intra- and interbacterial genetic exchange of Lyme disease spirochete erp genes generates sequence identity amidst diversityQ48219438
Characterization of the vls antigenic variation loci of the Lyme disease spirochaetes Borrelia garinii Ip90 and Borrelia afzelii ACAI.Q48258178
A plasmid-encoded nicotinamidase (PncA) is essential for infectivity of Borrelia burgdorferi in a mammalian hostQ50104321
Western blot analysis of sera from Lyme borreliosis patients according to the genomic species of the Borrelia strains used as antigens.Q50698005
Gepard: a rapid and sensitive tool for creating dotplots on genome scale.Q51921996
European Reservoir Hosts of Borrelia burgdorferi sensu latoQ56209751
Lyme borreliosisQ56764150
Inactivation of the fibronectin-binding adhesin genebbk32significantly attenuates the infectivity potential ofBorrelia burgdorferiQ62966001
DNA Strider. A Macintosh program for handling protein and nucleic acid sequencesQ71996288
Conservation of gene arrangement and an unusual organization of rRNA genes in the linear chromosomes of the Lyme disease spirochaetes Borrelia burgdorferi, B. garinii and B. afzeliiQ72387089
Genetic diversity and the absence of regional differences of Borrelia garinii as demonstrated by ospA and ospB gene sequence analysisQ73403460
A population genetic study of Borrelia burgdorferi sensu stricto from eastern Long Island, New York, suggested frequency-dependent selection, gene flow and host adaptationQ74219022
Detection of Borrelia afzelii, Borrelia burgdorferi sensu stricto, Borrelia garinii and group VS116 by PCR in skin biopsies of patients with erythema migrans and acrodermatitis chronica atrophicansQ77687372
Defining plasmids required by Borrelia burgdorferi for colonization of tick vector Ixodes scapularis (Acari: Ixodidae)Q81108263
Borrelia bavariensis sp. nov. is widely distributed in Europe and AsiaQ30654269
Evolutionary genomics of Borrelia burgdorferi sensu lato: findings, hypotheses, and the rise of hybridsQ30794348
Lost in plasmids: next generation sequencing and the complex genome of the tick-borne pathogen Borrelia burgdorferiQ30854061
The relapsing fever spirochete Borrelia hermsii contains multiple, antigen-encoding circular plasmids that are homologous to the cp32 plasmids of Lyme disease spirochetesQ30881145
Borrelia bissettiae sp. nov. and Borrelia californiensis sp. nov. Prevail in Diverse Enzootic Transmission CyclesQ31040078
Epidemiological aspects and molecular characterization of Borrelia burgdorferi s.l. from southern Germany with special respect to the new species Borrelia spielmanii sp. nov.Q31117930
Decorin-binding protein of Borrelia burgdorferi is encoded within a two-gene operon and is protective in the murine model of Lyme borreliosisQ32063131
Identification of potential virulence determinants by Himar1 transposition of infectious Borrelia burgdorferi B31.Q33259140
The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degraded subset of tick-borne Borrelia duttoniiQ33369074
Delineation of a new species of the Borrelia burgdorferi Sensu Lato Complex, Borrelia americana sp. novQ33511705
The cyclic-di-GMP signaling pathway in the Lyme disease spirochete, Borrelia burgdorferiQ33579968
High-throughput plasmid content analysis of Borrelia burgdorferi B31 by using Luminex multiplex technologyQ33775277
Induction of type I and type III interferons by Borrelia burgdorferi correlates with pathogenesis and requires linear plasmid 36.Q33778936
bptA (bbe16) is essential for the persistence of the Lyme disease spirochete, Borrelia burgdorferi, in its natural tick vectorQ33784565
Whole genome sequence of an unusual Borrelia burgdorferi sensu lato isolateQ33788979
BorreliaBase: a phylogeny-centered browser of Borrelia genomesQ33891876
Role of Borrelia burgdorferi linear plasmid 25 in infection of Ixodes scapularis ticksQ33937487
A second allele of eppA in Borrelia burgdorferi strain B31 is located on the previously undetected circular plasmid cp9-2Q33994874
Bacteriophages of spirochetesQ34081365
Borrelia genomes in the year 2000.Q34081379
Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates.Q34085198
Evolution and distribution of the ospC Gene, a transferable serotype determinant of Borrelia burgdorferiQ34153670
Genome stability of Lyme disease spirochetes: comparative genomics of Borrelia burgdorferi plasmids.Q34202850
A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia, and the genus Borreliella gen. nov. containing the memQ34415818
Analysis of an ordered, comprehensive STM mutant library in infectious Borrelia burgdorferi: insights into the genes required for mouse infectivityQ34469139
Whole-genome sequences of thirteen isolates of Borrelia burgdorferiQ34528629
Whole Genome Sequence and Comparative Genomics of the Novel Lyme Borreliosis Causing Pathogen, Borrelia mayoniiQ34548192
Genetic diversity of ospC in a local population of Borrelia burgdorferi sensu strictoQ34606054
Defining the plasmid-borne restriction-modification systems of the Lyme disease spirochete Borrelia burgdorferi.Q34740450
Vasculitis-like syndrome associated with Borrelia lusitaniae infectionQ34828884
Evolution of northeastern and midwestern Borrelia burgdorferi, United StatesQ34908070
Immunogenicity of Borrelia burgdorferi arthritis-related proteinQ34944212
In vivo expression technology identifies a novel virulence factor critical for Borrelia burgdorferi persistence in miceQ34979354
Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation.Q35013523
The absence of linear plasmid 25 or 28-1 of Borrelia burgdorferi dramatically alters the kinetics of experimental infection via distinct mechanismsQ35165125
Correlation of plasmids with infectivity of Borrelia burgdorferi sensu stricto type strain B31.Q35519913
Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacteriumQ35542002
Correlation between plasmid content and infectivity in Borrelia burgdorferiQ35579222
Complete genome sequence of Borrelia afzelii K78 and comparative genome analysisQ35583668
Linear chromosomes of Lyme disease agent spirochetes: genetic diversity and conservation of gene order.Q35585678
Molecular and evolutionary analyses of a variable series of genes in Borrelia burgdorferi that are related to ospE and ospF, constitute a gene family, and share a common upstream homology box.Q35613858
Homology throughout the multiple 32-kilobase circular plasmids present in Lyme disease spirochetes.Q35618631
Identification of the minimal cytolytic unit for streptolysin S and an expansion of the toxin family.Q35708754
Molecular characterization of the Borrelia burgdorferi in vivo-essential protein PncA.Q35963842
Analysis of the distribution and molecular heterogeneity of the ospD gene among the Lyme disease spirochetes: evidence for lateral gene exchangeQ35967434
The critical role of the linear plasmid lp36 in the infectious cycle of Borrelia burgdorferiQ35987393
Requirements for Borrelia burgdorferi plasmid maintenanceQ36007488
Complete nucleotide sequence of a circular plasmid from the Lyme disease spirochete, Borrelia burgdorferiQ36107298
Lyme borreliosis in Europe and North AmericaQ36153262
Progress in the molecular diagnosis of Lyme diseaseQ36205210
Comprehensive Spatial Analysis of the Borrelia burgdorferi Lipoproteome Reveals a Compartmentalization Bias toward the Bacterial SurfaceQ36245018
Whole-genome sequencing of Borrelia garinii BgVir, isolated from Taiga ticks (Ixodes persulcatus).Q36281032
Plasmid diversity and phylogenetic consistency in the Lyme disease agent Borrelia burgdorferiQ36281604
Essential role for OspA/B in the life cycle of the Lyme disease spirocheteQ36403858
Genetic basis for retention of a critical virulence plasmid of Borrelia burgdorferiQ36434723
Borrelia burgdorferi complement regulator-acquiring surface protein 2 (CspZ) as a serological marker of human Lyme disease.Q36497655
Trans-Atlantic exchanges have shaped the population structure of the Lyme disease agent Borrelia burgdorferi sensu strictoQ36666759
The failure of immune response evasion by linear plasmid 28-1-deficient Borrelia burgdorferi is attributable to persistent expression of an outer surface proteinQ36845230
Differences in Genotype, Clinical Features, and Inflammatory Potential of Borrelia burgdorferi sensu stricto Strains from Europe and the United StatesQ36884963
Low-passage-associated proteins of Borrelia burgdorferi B31: characterization and molecular cloning of OspD, a surface-exposed, plasmid-encoded lipoprotein.Q36970492
Distribution of cp32 prophages among Lyme disease-causing spirochetes and natural diversity of their lipoprotein-encoding erp lociQ36970682
Changes in infectivity and plasmid profile of the Lyme disease spirochete, Borrelia burgdorferi, as a result of in vitro cultivationQ36997714
Borrelia burgdorferi linear plasmid 28-3 confers a selective advantage in an experimental mouse-tick infection modelQ37036072
Peaceful coexistence amongst Borrelia plasmids: getting by with a little help from their friends?Q37079791
Large linear plasmids of Borrelia species that cause relapsing feverQ37124884
Plasmid analysis of Borrelia burgdorferi, the Lyme disease agentQ37145010
Characterization of a circular plasmid from Borrelia burgdorferi, etiologic agent of Lyme disease.Q37157226
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectLyme diseaseQ201989
P304page(s)218
P577publication date2018-03-27
P1433published inBMC GenomicsQ15765854
P1476titlePrimordial origin and diversification of plasmids in Lyme disease agent bacteria.
P478volume19

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cites work (P2860)
Q84497059A fast alignment-free bioinformatics procedure to infer accurate distance-based phylogenetic trees from genome assemblies
Q92901379Distinction between Borrelia and Borreliella is more robustly supported by molecular and phenotypic characteristics than all other neighbouring prokaryotic genera: Response to Margos' et al. "The genus Borrelia reloaded" (PLoS ONE 13(12): e0208432)
Q55512454Genomic and phenotypic characterization of Borrelia afzelii BO23 and Borrelia garinii CIP 103362.
Q92328408Lyme Disease Frontiers: Reconciling Borrelia Biology and Clinical Conundrums
Q92450254Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome

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