Context dependence, ancestral misidentification, and spurious signatures of natural selection.

scientific article published in June 2007

Context dependence, ancestral misidentification, and spurious signatures of natural selection. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/MOLBEV/MSM108
P698PubMed publication ID17545186
P5875ResearchGate publication ID6291683

P50authorCarlos D. BustamanteQ17612152
P2093author name stringScott H Williamson
Ryan D Hernandez
P433issue8
P304page(s)1792-1800
P577publication date2007-06-01
P1433published inMolecular Biology and EvolutionQ1992656
P1476titleContext dependence, ancestral misidentification, and spurious signatures of natural selection.
P478volume24

Reverse relations

cites work (P2860)
Q89971013A Study of Faster-Z Evolution in the Great Tit (Parus major)
Q37693465A Temporal Perspective on the Interplay of Demography and Selection on Deleterious Variation in Humans.
Q37090710A flexible forward simulator for populations subject to selection and demography
Q35620399A method for inferring the rate of occurrence and fitness effects of advantageous mutations
Q30000667A model-based approach for identifying signatures of ancient balancing selection in genetic data
Q34092400A population genetics-phylogenetics approach to inferring natural selection in coding sequences
Q64285747Adaptation and Conservation throughout the Drosophila melanogaster Life-Cycle
Q62751545Adaptive Landscape of Protein Variation in Human Exomes
Q45541989Analysis of site frequency spectra from Arabidopsis with context-dependent corrections for ancestral misinference
Q33303674Ancestral inference and the study of codon bias evolution: implications for molecular evolutionary analyses of the Drosophila melanogaster subgroup
Q35398774Approximation to the distribution of fitness effects across functional categories in human segregating polymorphisms
Q33339383Assessing the evolutionary impact of amino acid mutations in the human genome
Q35765101Asymmetric Context-Dependent Mutation Patterns Revealed through Mutation-Accumulation Experiments
Q58802595Biased Inference of Selection Due to GC-Biased Gene Conversion and the Rate of Protein Evolution in Flycatchers When Accounting for It
Q41826018Characteristics of neutral and deleterious protein-coding variation among individuals and populations
Q36361047Clinical implications of human population differences in genome-wide rates of functional genotypes
Q42672749Comparative Vertebrate Evolutionary Analyses of Type I Collagen: Potential of COL1a1 Gene Structure and Intron Variation for Common Bone-Related Diseases
Q56934099Context-Dependent Evolutionary Models for Non-Coding Sequences: An Overview of Several Decades of Research and an Analysis of Laurasiatheria and Primate Evolution
Q64276694Demographic History of the Human Commensal Drosophila melanogaster
Q36480410Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population
Q34367064Demographic inference using spectral methods on SNP data, with an analysis of the human out-of-Africa expansion
Q46245685Detecting Recent Positive Selection With a Single Locus Test Bi-Partitioning the Coalescent Tree.
Q34714977Detecting directional selection in the presence of recent admixture in African-Americans
Q33767122Disease-associated alleles in genome-wide association studies are enriched for derived low frequency alleles relative to HapMap and neutral expectations
Q52339977Distinguishing Among Evolutionary Forces Acting on Genome-Wide Base Composition: Computer Simulation Analysis of Approximate Methods for Inferring Site Frequency Spectra of Derived Mutations in Recombining Regions.
Q37275532Estimates of natural selection due to protein tertiary structure inform the ancestry of biallelic loci
Q35882363Evaluation of Ancestral Sequence Reconstruction Methods to Infer Nonstationary Patterns of Nucleotide Substitution
Q45832746Evidence for complex selection on four-fold degenerate sites in Drosophila melanogaster
Q34064841Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans
Q35212592Evidence for recent, population-specific evolution of the human mutation rate
Q60364425Evolutionary genomic dynamics of Peruvians before, during, and after the Inca Empire
Q33491547Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence
Q28647906Examining phylogenetic relationships among gibbon genera using whole genome sequence data using an approximate bayesian computation approach
Q91805925Exploiting selection at linked sites to infer the rate and strength of adaptation
Q35527013Extreme recombination frequencies shape genome variation and evolution in the honeybee, Apis mellifera
Q46299518Genome-Wide Analysis of Colonization History and Concomitant Selection in Arabidopsis lyrata.
Q26991993Genome-scale analysis of demographic history and adaptive selection
Q35467878Genome-wide survey of natural selection on functional, structural, and network properties of polymorphic sites in Saccharomyces paradoxus
Q21145834Hotspots of biased nucleotide substitutions in human genes
Q35422999Human piRNAs are under selection in Africans and repress transposable elements
Q42693407Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data.
Q30620384Inference of gorilla demographic and selective history from whole-genome sequence data.
Q33642802Inference of the Distribution of Selection Coefficients for New Nonsynonymous Mutations Using Large Samples
Q36480397Inferences of demography and selection in an African population of Drosophila melanogaster
Q38835112Inferring Demographic History Using Two-Locus Statistics
Q55480211Inferring the Probability of the Derived vs. the Ancestral Allelic State at a Polymorphic Site.
Q41209718Inferring the demographic history of Drosophila subobscura from nucleotide variation at regions not affected by chromosomal inversions
Q21144993Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
Q92639546Intraspecific diversification of the crop wild relative Brassica cretica Lam. using demographic model selection
Q28601091Joint Estimation of Contamination, Error and Demography for Nuclear DNA from Ancient Humans
Q64270361Linked Mutations at Adjacent Nucleotides Have Shaped Human Population Differentiation and Protein Evolution
Q35970436Low Genetic Quality Alters Key Dimensions of the Mutational Spectrum
Q30396861Meiotic recombination favors the spreading of deleterious mutations in human populations
Q93072885Methods for Estimating Demography and Detecting Between-Locus Differences in the Effective Population Size and Mutation Rate
Q33414073Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data
Q26852755Methods to detect selection on noncoding DNA
Q33784387Molecular hyperdiversity and evolution in very large populations
Q28597003Multispecies Outcomes of Sympatric Speciation after Admixture with the Source Population in Two Radiations of Nicaraguan Crater Lake Cichlids
Q35211692Mutation rate distribution inferred from coincident SNPs and coincident substitutions
Q43218001Natural Selection at the Brush-Border: Adaptations to Carbohydrate Diets in Humans and Other Mammals.
Q52596070New methods for inferring the distribution of fitness effects for INDELs and SNPs.
Q31171686Nucleosomes shape DNA polymorphism and divergence
Q35169862Ongoing GC-biased evolution is widespread in the human genome and enriched near recombination hot spots
Q92061023Population History and Gene Divergence in Native Mexicans Inferred from 76 Human Exomes
Q44870531Population genomic analysis reveals no evidence for GC-biased gene conversion in Drosophila melanogaster
Q30367885Proportionally more deleterious genetic variation in European than in African populations.
Q33699821Rapid evolution of the human mutation spectrum
Q33344253Relative effects of mutability and selection on single nucleotide polymorphisms in transcribed regions of the human genome
Q30000777Robust demographic inference from genomic and SNP data
Q33883126Selection on amino acid substitutions in Arabidopsis
Q37330187Site frequency spectra from genomic SNP surveys
Q37428432Strong heterogeneity in mutation rate causes misleading hallmarks of natural selection on indel mutations in the human genome
Q24810381Strong purifying selection at synonymous sites in D. melanogaster
Q35941597The Impact of Selection, Gene Conversion, and Biased Sampling on the Assessment of Microbial Demography
Q41166744The effects of demography and linkage on the estimation of selection and mutation parameters
Q35840674The functional spectrum of low-frequency coding variation
Q37011423The polymorphism frequency spectrum of finitely many sites under selection
Q34636272The projection of a test genome onto a reference population and applications to humans and archaic hominins
Q33786266The tendency to recreate ancestral CG dinucleotides in the human genome
Q97070419The use of SARS-CoV-2-related coronaviruses from bats and pangolins to polarize mutations in SARS-Cov-2
Q36875689Triallelic Population Genomics for Inferring Correlated Fitness Effects of Same Site Nonsynonymous Mutations
Q30558142Unconstrained evolution in short introns? - an analysis of genome-wide polymorphism and divergence data from Drosophila
Q30383578Viruses are a dominant driver of protein adaptation in mammals.
Q28603568Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection
Q28662073Why to account for finite sites in population genetic studies and how to do this with Jaatha 2.0

Search more.