De novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa.

scientific article published on 5 August 2011

De novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1365-313X.2011.04679.X
P698PubMed publication ID21689170
P5875ResearchGate publication ID51234531

P50authorAnnaliese S MasonQ57422988
Joseph Christopher PiresQ21523025
P2093author name stringJun Zou
Wei Xia
Jinling Meng
Ruiyuan Li
Yan Long
Tae-Jin Yang
Wei Qian
Donghui Fu
Huihui Gong
Beom S Park
Yong P Lim
P2860cites workBidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).Q34856038
Do the different parental 'heteromes' cause genomic shock in newly formed allopolyploids?Q35213567
Polyploidy: genome obesity and its consequencesQ35946010
Transposable elements, gene creation and genome rearrangement in flowering plantsQ36283968
Progress in understanding and sequencing the genome of Brassica rapaQ36444996
Chromosome 'speed dating' during meiosis of polyploid Brassica hybrids and haploids.Q37173694
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploidsQ37376096
Genetic regulation of meiosis in polyploid species: new insights into an old questionQ37632579
Homoeologous recombination in allopolyploids: the polyploid ratchetQ37650893
Impact of transposable elements on the organization and function of allopolyploid genomesQ37650904
LINEs mobilize SINEs in the eel through a shared 3' sequence.Q42687400
A and C genome distinction and chromosome identification in brassica napus by sequential fluorescence in situ hybridization and genomic in situ hybridizationQ43171178
Rapid genomic changes in interspecific and intergeneric hybrids and allopolyploids of TriticeaeQ44536294
Pairing and recombination at meiosis of Brassica rapa (AA) x Brassica napus (AACC) hybrids.Q51785818
Interspecific hybridization increases transposition rates of Osvaldo.Q52571548
The first meiosis of resynthesized Brassica napus, a genome blender.Q53064525
Transpositional reactivation of two LTR retrotransposons in rice-Zizania recombinant inbred lines (RILs).Q54396751
Polyploidy, hybridization and reticulate evolution: lessons from the BrassicaceaeQ57206638
Flowering time divergence and genomic rearrangements in resynthesized Brassica polyploids (Brassicaceae)Q58044790
Integration of Brassica A genome genetic linkage map between Brassica napus and B. rapaQ58798739
Plant speciationQ24647925
Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploidsQ24679271
A genomic view of introgression and hybrid speciationQ26810013
Genetic and epigenetic interactions in allopolyploid plantsQ26810051
Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysisQ28137750
Hybrid speciation in plants: new insights from molecular studiesQ28235827
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheatQ28345504
The significance of responses of the genome to challengeQ28913697
Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genomeQ30978658
Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species.Q33201096
Characterization of the centromere and peri-centromere retrotransposons in Brassica rapa and their distribution in related Brassica speciesQ33265926
Parental squabbles and genome expression: lessons from the polyploidsQ33445302
The role of hybridization in plant speciationQ33477947
Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapaQ33502907
Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomesQ33950056
Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolutionQ34001942
Sequencing of a rice centromere uncovers active genesQ34289102
Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in riceQ34338870
Rapid concerted evolution of nuclear ribosomal DNA in two Tragopogon allopolyploids of recent and recurrent originQ34570742
Detection of chromosomal rearrangements derived from homologous recombination in four mapping populations of Brassica napus L.Q34570749
Extensive de Novo genomic variation in rice induced by introgression from wild rice (Zizania latifolia Griseb.).Q34573563
Rapid and repeatable elimination of a parental genome-specific DNA repeat (pGc1R-1a) in newly synthesized wheat allopolyploidsQ34576546
Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thalianaQ34589707
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotypeQ34714961
P433issue2
P921main subjectBrassica rapaQ3384
rapeseedQ177932
trait variationQ112058781
P6104maintained by WikiProjectWikiProject EcologyQ10818384
P304page(s)212-224
P577publication date2011-08-05
P1433published inThe Plant JournalQ15766987
P1476titleDe novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa.
P478volume68

Reverse relations

cites work (P2860)
Q27011339A comparative analysis of insertional effects in genetically engineered plants: considerations for pre-market assessments
Q35377372A complex recombination pattern in the genome of allotetraploid Brassica napus as revealed by a high-density genetic map.
Q34708678Assessing and broadening genetic diversity of a rapeseed germplasm collection
Q36173105Characterization and Development of EST-SSRs by Deep Transcriptome Sequencing in Chinese Cabbage (Brassica rapa L. ssp. pekinensis).
Q35781250Chromosomal distribution and evolution of abundant retrotransposons in plants: gypsy elements in diploid and polyploid Brachiaria forage grasses
Q28603265Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes
Q46894648Constructing a dense genetic linkage map and mapping QTL for the traits of flower development in Brassica carinata.
Q31086582Construction of a high-density genetic map for grape using next generation restriction-site associated DNA sequencing
Q38051595Editor's choice: Crop genome plasticity and its relevance to food and feed safety of genetically engineered breeding stacks
Q89783147Examination of Genomic and Transcriptomic Alterations in a Morphologically Stable Line, MU1, Generated by Intergeneric Pollination
Q30700523Extensive tRNA gene changes in synthetic Brassica napus
Q36789103Genetic and Epigenetic Changes in Oilseed Rape (Brassica napus L.) Extracted from Intergeneric Allopolyploid and Additions with Orychophragmus
Q46336626Genetic changes in a novel breeding population of Brassica napus synthesized from hundreds of crosses between B. rapa and B. carinata
Q34994712Genomewide variation in an introgression line of rice-Zizania revealed by whole-genome re-sequencing
Q34611453Genomic change, retrotransposon mobilization and extensive cytosine methylation alteration in Brassica napus introgressions from two intertribal hybridizations
Q42640149High-resolution molecular karyotyping uncovers pairing between ancestrally related Brassica chromosomes
Q41496364High-throughput genotyping for species identification and diversity assessment in germplasm collections
Q46247928Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus
Q34378431Identification and characterization of improved nitrogen efficiency in interspecific hybridized new-type Brassica napus
Q90667954Interspecific hybridisation and LTR-retrotransposon mobilisation-related structural variation in plants: A case study
Q28959137Introgressing Subgenome Components from Brassica rapa and B. carinata to B. juncea for Broadening Its Genetic Base and Exploring Intersubgenomic Heterosis
Q50557433Map-based cloning reveals the complex organization of the BnRf locus and leads to the identification of BnRf(b), a male sterility gene, in Brassica napus.
Q36396460Microsatellite mutation rate during allohexaploidization of newly resynthesized wheat
Q61798618Phenotypic, cytogenetic, and molecular marker analysis of Brassica napus introgressants derived from an intergeneric hybridization with Orychophragmus
Q40412277Population Genomic Analysis Reveals Differential Evolutionary Histories and Patterns of Diversity across Subgenomes and Subpopulations of Brassica napus L.
Q89495236Potential of the C Genome of the Different Variants of Brassica oleracea for Heterosis in Spring B. napus Canola
Q34323524Rapid SNP discovery and a RAD-based high-density linkage map in jujube (Ziziphus Mill.).
Q35559015Rapid genomic DNA changes in allotetraploid fish hybrids
Q64263457Reconstituting the genome of a young allopolyploid crop, Brassica napus, with its related species
Q48245724Resynthesis of Brassica napus through hybridization between B. juncea and B. carinata
Q39827817Small RNA changes in synthetic Brassica napus
Q33575804The fate of chromosomes and alleles in an allohexaploid Brassica population
Q48164784The high-quality genome of Brassica napus cultivar 'ZS11' reveals the introgression history in semi-winter morphotype
Q26738916The importance of reproductive barriers and the effect of allopolyploidization on crop breeding
Q45400516Transposon variation by order during allopolyploidisation between Brassica oleracea and Brassica rapa.
Q58802716Whole Genome Incorporation and Epigenetic Stability in a Newly Synthetic Allopolyploid of Gynogenetic Gibel Carp

Search more.