| P50 | author | Abbas Khan | Q88531862 |
| P2093 | author name string | Arif Ali | |
| | Muhammad Junaid | |
| | Dong-Qing Wei | |
| | Syed Shujait Ali | |
| | Aman Chandra Kaushik | |
| | Aamir Mehmood | |
| P2860 | cites work | A coarse-grained protein force field for folding and structure prediction. | Q51911563 |
| | New and simple method to predict dosage of drugs obeying simple Michaelis-Menten elimination kinetics and to distinguish such kinetics from simple first order and from parallel Michaelis-Menten and first order kinetics. | Q52431235 |
| | A semi-empirical method for prediction of antigenic determinants on protein antigens | Q52466148 |
| | Targeting retinoblastoma protein for degradation by proteasomes. | Q53631242 |
| | The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage | Q56879701 |
| | Therapeutic human papillomavirus vaccines: current clinical trials and future directions | Q56937332 |
| | Role of HLA-A motifs in identification of potential CTL epitopes in human papillomavirus type 16 E6 and E7 proteins | Q71616385 |
| | The kinetic stability of MHC class II:peptide complexes is a key parameter that dictates immunodominance | Q80416551 |
| | Identification of a member of the interferon regulatory factor family that binds to the interferon-stimulated response element and activates expression of interferon-induced genes | Q24311045 |
| | The HPV-16 E6 and E6-AP complex functions as a ubiquitin-protein ligase in the ubiquitination of p53 | Q24317677 |
| | SCRATCH: a protein structure and structural feature prediction server | Q24812422 |
| | A systematic bioinformatics approach for selection of epitope-based vaccine targets | Q27481378 |
| | Reliable prediction of T-cell epitopes using neural networks with novel sequence representations | Q27485882 |
| | Epitope recognition by diverse antibodies suggests conformational convergence in an antibody response | Q27638003 |
| | Inference of macromolecular assemblies from crystalline state | Q27860457 |
| | UCSF Chimera--a visualization system for exploratory research and analysis | Q27860666 |
| | Towards peptide vaccines against Zika virus: Immunoinformatics combined with molecular dynamics simulations to predict antigenic epitopes of Zika viral proteins | Q28119724 |
| | Papillomaviruses and cancer: from basic studies to clinical application | Q29614745 |
| | Classification of papillomaviruses | Q29618731 |
| | ElliPro: a new structure-based tool for the prediction of antibody epitopes | Q30373719 |
| | New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: correlation of predicted surface residues with antigenicity and X-ray-derived accessible sites | Q30708262 |
| | PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data | Q31026348 |
| | Solving and analyzing side-chain positioning problems using linear and integer programming | Q31128789 |
| | Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration | Q33196105 |
| | Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction | Q33304572 |
| | The contribution of vaccination to global health: past, present and future | Q33624593 |
| | Human papillomavirus type 16 DNA cooperates with activated ras in transforming primary cells. | Q33929221 |
| | Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments | Q34021545 |
| | Influence of protein flexibility and peptide conformation on reactivity of monoclonal anti-peptide antibodies with a protein alpha-helix | Q34372807 |
| | Human papillomaviruses and their role in cervical cancer | Q34477831 |
| | A consensus epitope prediction approach identifies the breadth of murine T(CD8+)-cell responses to vaccinia virus | Q34536936 |
| | Genital human papillomavirus infection | Q35114105 |
| | Delivering on the promise: HPV vaccines and cervical cancer | Q35697573 |
| | The CD8+ T-cell response to lymphocytic choriomeningitis virus involves the L antigen: uncovering new tricks for an old virus | Q35857498 |
| | Mechanisms of human papillomavirus-induced oncogenesis. | Q35915935 |
| | Computational methods for prediction of T-cell epitopes--a framework for modelling, testing, and applications | Q35948335 |
| | Human papillomaviruses in the pathogenesis of anogenital cancer | Q36413260 |
| | A novel genital human papillomavirus (HPV), HPV type 74, found in immunosuppressed patients | Q36536470 |
| | NetMHCpan-3.0; improved prediction of binding to MHC class I molecules integrating information from multiple receptor and peptide length datasets | Q36742441 |
| | FireDock: a web server for fast interaction refinement in molecular docking | Q36749421 |
| | Immortalization and altered differentiation of human keratinocytes in vitro by the E6 and E7 open reading frames of human papillomavirus type 18. | Q36800223 |
| | The E6 and E7 genes of the human papillomavirus type 16 together are necessary and sufficient for transformation of primary human keratinocytes | Q36831207 |
| | Induction of hepatitis A virus-neutralizing antibody by a virus-specific synthetic peptide | Q36904908 |
| | Papillomavirus E6 and E7 proteins and their cellular targets | Q36992007 |
| | Rapid clearance of human papillomavirus and implications for clinical focus on persistent infections | Q36994715 |
| | Influence of chromosomal integration on glucocorticoid-regulated transcription of growth-stimulating papillomavirus genes E6 and E7 in cervical carcinoma cells | Q37404835 |
| | HLA class I alleles are associated with peptide-binding repertoires of different size, affinity, and immunogenicity | Q37414385 |
| | Penises not required: a systematic review of the potential for human papillomavirus horizontal transmission that is non-sexual or does not include penile penetration | Q38598413 |
| | Basic concepts in population modeling, simulation, and model-based drug development-part 2: introduction to pharmacokinetic modeling methods. | Q40118820 |
| | The E6-E7 region of human papillomavirus type 18 is sufficient for transformation of NIH 3T3 and rat-1 cells | Q40141212 |
| | Routine Microsecond Molecular Dynamics Simulations with AMBER on GPUs. 2. Explicit Solvent Particle Mesh Ewald | Q40291611 |
| | Immunoinformatics and its relevance to understanding human immune disease | Q40426673 |
| | The biology of human papillomaviruses: from warts to cancer. | Q40742717 |
| | A phase I trial of a human papillomavirus (HPV) peptide vaccine for women with high-grade cervical and vulvar intraepithelial neoplasia who are HPV 16 positive. | Q40746658 |
| | Correlation of modified human papilloma virus early gene expression with altered growth properties in C4-1 cervical carcinoma cells. | Q41335230 |
| | PEP-FOLD3: faster de novo structure prediction for linear peptides in solution and in complex | Q41724271 |
| | Structure and transcription of human papillomavirus sequences in cervical carcinoma cells | Q41914039 |
| | HPV-16 E6 and E7 protein T cell epitopes prediction analysis based on distributions of HLA-A loci across populations: an in silico approach | Q42270718 |
| | AlgPred: prediction of allergenic proteins and mapping of IgE epitopes. | Q42552741 |
| | Mutation analysis of the cross-reactive epitopes of Japanese encephalitis virus envelope glycoprotein. | Q42977764 |
| | FireDock: fast interaction refinement in molecular docking | Q47598103 |
| | Gapped sequence alignment using artificial neural networks: application to the MHC class I system. | Q47601200 |
| | Taking geometry to its edge: fast unbound rigid (and hinge-bent) docking | Q47613348 |
| | Human papillomavirus type distribution in 30,848 invasive cervical cancers worldwide: Variation by geographical region, histological type and year of publication | Q47860026 |
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 5 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | computational biology | Q177005 |
| | systems biology | Q815297 |
| P304 | page(s) | e0196484 | |
| P577 | publication date | 2018-05-01 | |
| P1433 | published in | PLOS One | Q564954 |
| P1476 | title | Computational identification, characterization and validation of potential antigenic peptide vaccines from hrHPVs E6 proteins using immunoinformatics and computational systems biology approaches | |
| P478 | volume | 13 | |