KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics

KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/GIGASCIENCE/GIY078
P8608Fatcat IDrelease_6xwtghcaarafhig22i4ucrxlee
P932PMC publication ID6048990
P698PubMed publication ID29961849

P50authorPeter van BaarlenQ42439548
Marcela M Fernandez-GutierrezQ59683153
P2093author name stringMichiel Kleerebezem
Andrew P Stubbs
David B H van Zessen
P2860cites workAn optimized method for accurate quantification of cell migration using human small intestine cellsQ50281843
A Threshold Selection Method from Gray-Level HistogramsQ112664308
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciencesQ21092859
Modeling of the bacterial growth curveQ24671987
A high-throughput cell migration assay using scratch wound healing, a comparison of image-based readout methodsQ24796902
Cell migration: integrating signals from front to backQ27860670
A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening AssaysQ28145712
CellProfiler: free, versatile software for automated biological image analysisQ28286175
The ImageJ ecosystem: An open platform for biomedical image analysisQ28364366
Watersheds in digital spaces: an efficient algorithm based on immersion simulationsQ29013909
Collective cell migration in morphogenesis, regeneration and cancerQ29616634
In vitro scratch assay: a convenient and inexpensive method for analysis of cell migration in vitroQ29617927
Substrate stiffness regulates cadherin-dependent collective migration through myosin-II contractility.Q30527788
CellMissy: a tool for management, storage and analysis of cell migration data produced in wound healing-like assaysQ30659486
A high throughput, interactive imaging, bright-field wound healing assay.Q34064039
The influence of oral bacteria on epithelial cell migration in vitroQ35056337
Effect of bacteria on the wound healing behavior of oral epithelial cellsQ35107408
MAP kinases and cell migrationQ35889220
Epidermal growth factor and transforming growth factor-alpha: differential intracellular routing and processing of ligand-receptor complexesQ36745372
Transcriptional control of wound repairQ36809120
How ERK1/2 activation controls cell proliferation and cell death: Is subcellular localization the answer?Q37309204
Histatins enhance wound closure with oral and non-oral cells.Q39797186
TScratch: a novel and simple software tool for automated analysis of monolayer wound healing assaysQ39850044
Identification of genes that regulate epithelial cell migration using an siRNA screening approachQ39892281
Lactobacillus rhamnosus GG Lysate Increases Re-Epithelialization of Keratinocyte Scratch Assays by Promoting MigrationQ40355865
Streptococcus salivarius MS-oral-D6 promotes gingival re-epithelialization in vitro through a secreted serine protease.Q41322319
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesCellProfilerQ5058134
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectautomationQ184199
Galaxy platformQ5518091
P577publication date2018-07-01
P1433published inGigaScienceQ19969338
P1476titleKREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics
P478volume7

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cites work (P2860)
Q89810936A salivary metabolite signature that reflects gingival host-microbe interactions: instability predicts gingivitis susceptibility
Q112726054Human milk extracellular vesicles target nodes in interconnected signalling pathways that enhance oral epithelial barrier function and dampen immune responses

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