Towards an Evolutionary Model of Animal-Associated Microbiomes

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Towards an Evolutionary Model of Animal-Associated Microbiomes is …
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scholarly articleQ13442814

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P8978DBLP publication IDjournals/entropy/YeomanCYMKSLNWW11
P356DOI10.3390/E13030570
P5875ResearchGate publication ID225274181

P50authorKaren E. NelsonQ20829795
Angela D. KentQ55090023
Suleyman YildirimQ58339853
Margret E Berg MillerQ58457159
P2093author name stringNicholas Chia
Rebecca Stumpf
Brenda A. Wilson
Bryan A. White
Carl J. Yeoman
Steven R. Leigh
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Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolasesQ24642606
A core gut microbiome in obese and lean twinsQ24649648
Is evolution Darwinian or/and Lamarckian?Q24651873
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Uncultured microorganisms as a source of secondary metabolitesQ37774548
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Atopobium vaginae triggers an innate immune response in an in vitro model of bacterial vaginosis.Q39993233
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Human metabolic phenotypes link directly to specific dietary preferences in healthy individualsQ44299468
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Distinct microbiome in pouchitis compared to healthy pouches in ulcerative colitis and familial adenomatous polyposisQ45019303
Relationship between a toll-like receptor-4 gene polymorphism, bacterial vaginosis-related flora and vaginal cytokine responses in pregnant womenQ45052566
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Origin of life. Some like it hot, but not the first biomolecules.Q46225210
Linkage of microbial ecology to phenotype: correlation of rumen microbial ecology to cattle's feed efficiencyQ46373909
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Differences between the normal vaginal bacterial community of baboons and that of humansQ47359835
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Commensal anaerobic gut bacteria attenuate inflammation by regulating nuclear-cytoplasmic shuttling of PPAR-gamma and RelA.Q50101913
Clonal interference, multiple mutations and adaptation in large asexual populationsQ37011413
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Multilevel selection 1: Quantitative genetics of inheritance and response to selectionQ24685204
Multilevel selection 2: Estimating the genetic parameters determining inheritance and response to selectionQ24685222
Evolutionary relationships of wild hominids recapitulated by gut microbial communitiesQ27322706
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Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiotaQ27660452
Microbial ecology: human gut microbes associated with obesityQ27861004
Stromatolite reef from the Early Archaean era of AustraliaQ28244909
The genetical evolution of social behaviour. IQ28256872
Evolution of cross-feeding in microbial populationsQ28273191
Aberrant expansion of segmented filamentous bacteria in IgA-deficient gutQ28505481
Thermostable enzymes as biocatalysts in the biofuel industryQ28607919
Worlds within worlds: evolution of the vertebrate gut microbiotaQ28754891
Evolution of mammals and their gut microbesQ28755326
Genomic changes following host restriction in bacteriaQ29039035
Competitive ExclusionQ29542311
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newbornsQ29547261
Bacterial community variation in human body habitats across space and timeQ29547432
The human microbiome projectQ29547661
An ecological and evolutionary perspective on human-microbe mutualism and diseaseQ29614265
CRISPR/Cas, the immune system of bacteria and archaeaQ29614423
The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic miceQ29614457
Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5Q29615053
Microbiota and SCFA in lean and overweight healthy subjectsQ29615812
Normal gut microbiota modulates brain development and behaviorQ29616855
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termiteQ29618893
THE EDIACARA BIOTA: Neoproterozoic Origin of Animals and Their EcosystemsQ30051548
Are viruses driving microbial diversification and diversity?Q31033752
The impact of phages on interspecific competition in experimental populations of bacteriaQ33266457
Disturbance and recovery of microbial community structure and function following Hurricane FrancesQ33273658
The diversity of coliphages and coliforms in horse feces reveals a complex pattern of ecological interactionsQ33294397
Environmental variability and modularity of bacterial metabolic networksQ33299957
Interplay between ecological communities and evolution: review of feedbacks from microevolutionary to macroevolutionary scalesQ33344378
Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiomeQ33359584
Heterogeneity of vaginal microbial communities within individualsQ33401468
Microbial diversity in ostrich ceca as revealed by 16S ribosomal RNA gene clone library and detection of novel Fibrobacter speciesQ33486991
Intestinal microbiota regulate xenobiotic metabolism in the liverQ33501739
Association between intracellular infectious agents and Tourette's syndromeQ33515059
A catalog of reference genomes from the human microbiomeQ33583040
The ecological role of bacteriocins in bacterial competitionQ33594391
Inference and characterization of horizontally transferred gene families using stochastic mappingQ33654633
Dietary modulation of gut functional ecology studied by fecal metabonomicsQ33679199
CRISPR associated diversity within a population of Sulfolobus islandicusQ33712112
Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communitiesQ33754443
Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy productionQ33856881
Horizontal gene transfer in bacterial and archaeal complete genomesQ33925228
Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relativesQ33959353
Predator-specific enrichment of actinobacteria from a cosmopolitan freshwater clade in mixed continuous culture.Q33989471
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivoresQ34093130
Compartments revealed in food-web structureQ34277967
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factorsQ34279235
Predation on prokaryotes in the water column and its ecological implicationsQ34426183
The speed of adaptation in large asexual populationsQ34645731
Coevolution with viruses drives the evolution of bacterial mutation rates.Q34722064
Vaccines for Proteus mirabilis in urinary tract infectionQ34756591
Collective evolution and the genetic codeQ34771128
Human metabolic phenotype diversity and its association with diet and blood pressure.Q34772005
Genome evolution reveals biochemical networks and functional modulesQ34787866
Evolution of cooperation by multilevel selectionQ34984209
Modular assembly of genes and the evolution of new functionsQ35179965
Long-term maintenance of species-specific bacterial microbiota in the basal metazoan HydraQ35916818
Off the hook--how bacteria survive protozoan grazingQ36151453
Molecular interactions between bacterial symbionts and their hostsQ36562498
The evolution of modularity in bacterial metabolic networks.Q36657624
The role of ecological theory in microbial ecology.Q36792562
Intestinal bacteria and ageingQ36797288
The influence of sex, handedness, and washing on the diversity of hand surface bacteriaQ36976749
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue3
P921main subjectmicrobiomeQ1330402
P304page(s)570-594
P577publication date2011-02-25
P1433published inEntropyQ3011618
P1476titleTowards an Evolutionary Model of Animal-Associated Microbiomes
P478volume13

Reverse relations

cites work (P2860)
Q41872070Aging and the human gut microbiota-from correlation to causality
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Q27318410Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen
Q33898119Fecal microbiomes of non-human primates in Western Uganda reveal species-specific communities largely resistant to habitat perturbation
Q39192424Gene Sequence Analyses of the Healthy Oral Microbiome in Humans and Companion Animals
Q35610842Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes
Q36363783Gut Microbiota as a Trigger of Accelerated Directional Adaptive Evolution: Acquisition of Herbivory in the Context of Extracellular Vesicles, MicroRNAs and Inter-Kingdom Crosstalk
Q35560135Influence of age, reproductive cycling status, and menstruation on the vaginal microbiome in baboons (Papio anubis)
Q38795638Microbial processes driving coral reef organic carbon flow.
Q35705552Neutral Models of Microbiome Evolution
Q34336377Oligotyping reveals differences between gut microbiomes of free-ranging sympatric Namibian carnivores (Acinonyx jubatus, Canis mesomelas) on a bacterial species-like level
Q36672404Sex differences in the gut microbiome-brain axis across the lifespan
Q38031315The microbiome of the chicken gastrointestinal tract.

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