Development of COS-SNP and HRM markers for high-throughput and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.)

article

Development of COS-SNP and HRM markers for high-throughput and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.) is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/S00122-012-2038-9
P2888exact matchhttps://scigraph.springernature.com/pub.10.1007/s00122-012-2038-9
P698PubMed publication ID23292293

P50authorJames A KolmerQ88477294
Jaroslav DoleželQ38591023
Hana ŠimkováQ39698963
Marco MaccaferriQ57020059
Roberto TuberosaQ57315614
Filippo M BassiQ59203544
P2093author name stringIrma Terracciano
Karim Ammar
Maria C Sanguineti
Silvio Salvi
Andrea Massi
Paola Mantovani
P2860cites workPlant NBS-LRR proteins: adaptable guardsQ21184146
Genome sequencing and analysis of the model grass Brachypodium distachyonQ22122196
The 30-kD subunit of mammalian cleavage and polyadenylation specificity factor and its yeast homolog are RNA-binding zinc finger proteinsQ27938917
Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheatQ28238339
Marker-assisted wheat breeding: present status and future possibilitiesQ29028859
Prediction of total genetic value using genome-wide dense marker mapsQ29619613
Resistance to leaf rust in cultivars of bread wheat and durum wheat grown in SpainQ59327168
A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.).Q80874306
Map-based isolation of disease resistance genes from bread wheat: cloning in a supersize genomeQ81240250
Molecular markers for four leaf rust resistance genes introgressed into wheat from wild relativesQ81249877
Genome-wide analysis of cyclin family in rice (Oryza Sativa L.).Q82364385
Molecular mapping of the major resistance quantitative trait locus qHS2.09 with simple sequence repeat and single nucleotide polymorphism markers in maizeQ83726668
Comparative genetic analysis of a wheat seed dormancy QTL with rice and Brachypodium identifies candidate genes for ABA perception and calcium signalingQ83789813
Genomics in cereals: from genome-wide conserved orthologous set (COS) sequences to candidate genes for trait dissectionQ84164705
Genetic and comparative genomics mapping reveals that a powdery mildew resistance gene Ml3D232 originating from wild emmer co-segregates with an NBS-LRR analog in common wheat (Triticum aestivum L.)Q84668648
High resolution melting analysis for the detection of EMS induced mutations in wheat SBEIIa genesQ30409293
Simultaneous mutation detection of three homoeologous genes in wheat by High Resolution Melting analysis and Mutation SurveyorQ30952059
Comparative genomics in the grass family: molecular characterization of grass genome structure and evolutionQ31092756
CARHTA GENE: multipopulation integrated genetic and radiation hybrid mappingQ31136178
Chromosome-based genomics in the cerealsQ33273365
A genome-wide SNP panel for mapping and association studies in the rat.Q33321064
Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barleyQ33345041
A physical map of the 1-gigabase bread wheat chromosome 3B.Q33373632
ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discoveryQ33510272
Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grassesQ33564210
Comparative DNA sequence analysis of wheat and rice genomesQ33682449
Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.).Q33917352
Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysisQ33953043
An evaluation of genetic distances for use with microsatellite loci.Q33964342
Linear models for breeding values prediction in haplotype-assisted selection - an analysis of QTL-MAS Workshop 2011 DataQ34284497
21st century wheat breeding: plot selection or plate detection?Q35062584
The TIGR Rice Genome Annotation Resource: improvements and new featuresQ35545826
A powerful likelihood method for the analysis of linkage disequilibrium between trait loci and one or more polymorphic marker lociQ35643265
Hybridization of synthetic oligodeoxyribonucleotides to ΦX174 DNA: the effect of single base pair mismatchQ35757169
Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genomeQ35840684
Development and mapping of SNP assays in allotetraploid cottonQ35884301
Contrasting rates of evolution in Pm3 loci from three wheat species and riceQ36083274
SNPs in forensic genetics: a review on SNP typing methodologiesQ36267311
Cereal breeding takes a walk on the wild sideQ37022026
The 'inner circle' of the cereal genomesQ37354535
Sequence-based marker development in wheat: advances and applications to breedingQ37944463
Isolation and sequence analysis of wheat NBS-LRR type disease resistance gene analogs using degenerate PCR primers.Q38302440
Microsatellite behavior with range constraints: parameter estimation and improved distances for use in phylogenetic reconstructionQ38550907
Chromosomal rearrangements in wheat: their types and distributionQ38886927
A genetic linkage map of the Durum x Triticum dicoccoides backcross population based on SSRs and AFLP markers, and QTL analysis for milling traitsQ38992392
Association mapping in durum wheat grown across a broad range of water regimesQ39199252
A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring x SQ1 and its use to compare QTLs for grain yield across a range of environments.Q39374459
MapChart: software for the graphical presentation of linkage maps and QTLsQ39605798
Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.).Q39848975
A major QTL for durable leaf rust resistance widely exploited in durum wheat breeding programs maps on the distal region of chromosome arm 7BL.Q42594862
Unique pattern of R-gene variation within populations in ArabidopsisQ42611209
Prediction of identity by descent probabilities from marker-haplotypesQ43101773
A serine carboxypeptidase-like acyltransferase is required for synthesis of antimicrobial compounds and disease resistance in oatsQ43291174
A rice serine carboxypeptidase-like gene OsBISCPL1 is involved in regulation of defense responses against biotic and oxidative stressQ43515161
Targeted re-sequencing of the allohexaploid wheat exomeQ43580903
Diversity arrays technology (DArT) for high-throughput profiling of the hexaploid wheat genome.Q43908261
Association between allelic variation at the Phytoene synthase 1 gene and yellow pigment content in the wheat grainQ44222366
Fine mapping and targeted SNP survey using rice-wheat gene colinearity in the region of the Bo1 boron toxicity tolerance locus of bread wheatQ44318831
Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping populationQ44859528
Simple Sequence Repeat Diversity of a Worldwide Collection of Puccinia triticina from Durum WheatQ46408815
QTL analysis of pasta quality using a composite microsatellite and SNP map of durum wheatQ46694991
A high-density intervarietal map of the wheat genome enriched with markers derived from expressed sequence tagsQ46779969
Complex microcolinearity among wheat, rice, and barley revealed by fine mapping of the genomic region harboring a major QTL for resistance to Fusarium head blight in wheatQ46790858
Comparison of orthologous loci from small grass genomes Brachypodium and rice: implications for wheat genomics and grass genome annotationQ48081867
Fine genetic mapping of greenbug aphid-resistance gene Gb3 in Aegilops tauschii.Q52729971
An integrated genetic linkage map of cultivated peanut (Arachis hypogaea L.) constructed from two RIL populations.Q52838029
An economic method for the fluorescent labeling of PCR fragments.Q52974515
Identification of a QTL conferring seedling and adult plant resistance to eyespot on chromosome 5A of Cappelle Desprez.Q53461780
Molecular mapping of a powdery mildew resistance gene in common wheat landrace Baihulu and its allelism with Pm24.Q54301917
Genetic map of lps3: a new short petiole gene in soybeans.Q54327330
Collinearity-based marker mining for the fine mapping of Pm6, a powdery mildew resistance gene in wheat.Q54379319
Relationships among durum wheat accessions. II. A comparison of molecular and pedigree informationQ56995495
Genetic Analysis of Slow-Rusting Resistance to Leaf Rust in Durum WheatQ58834067
Identification and Molecular Characterization of Leaf Rust Resistance GeneLr14ain Durum WheatQ58834069
Molecular Mapping of a Leaf Rust Resistance Gene on the Short Arm of Chromosome 6B of Durum WheatQ58834074
Evaluation of slow rusting resistance components to leaf rust in CIMMYT durum wheatsQ58834080
Identification and Mapping of and a Linked Leaf Rust Resistance Gene in Durum WheatQ58834082
Effect of Leaf Rust on Grain Yield and Yield Traits of Durum Wheats with Race-Specific and Slow-Rusting Resistance to Leaf RustQ58834090
New Genes for Leaf Rust Resistance in CIMMYT Durum WheatsQ58834097
Association mapping of leaf rust response in durum wheatQ58899997
Virulence Phenotypes and Molecular Genotypes in Collections of Puccinia triticina from ItalyQ58900004
An integrated DArT-SSR linkage map of durum wheatQ58900009
Genetic analysis of durable resistance against leaf rust in durum wheatQ59327134
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectwheatQ15645384
TriticumQ12106
Triticum durumQ618324
P304page(s)1077-101
P577publication date2013-04-01
P1433published inTheoretical and Applied GeneticsQ2694323
P1476titleDevelopment of COS-SNP and HRM markers for high-throughput and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.)
P478volume126

Reverse relations

cites work (P2860)
Q55094819Characterization and mapping of leaf rust resistance in four durum wheat cultivars.
Q57434818Characterization of Two Adult-Plant Stripe Rust Resistance Genes on Chromosomes 3BS and 4BL in Soft Red Winter Wheat
Q35599464Chromosomal genomics facilitates fine mapping of a Russian wheat aphid resistance gene
Q38272183Development and use of molecular markers: past and present
Q39680853Development and validation of KASP assays for genes underpinning key economic traits in bread wheat
Q53788235Genetic analysis of a novel broad-spectrum powdery mildew resistance gene from the wheat-Agropyron cristatum introgression line Pubing 74.
Q42237427Genome-wide association analysis identified SNPs closely linked to a gene resistant to Soil-borne wheat mosaic virus
Q99565975Genome-wide association mapping for resistance to leaf, stem, and yellow rusts of common wheat under field conditions of South Kazakhstan
Q94948617Identification of candidate chromosome region of Sbwm1 for Soil-borne wheat mosaic virus resistance in wheat
Q59007096Independent mis-splicing mutations inTaPHS1causing loss of preharvest sprouting (PHS) resistance during wheat domestication
Q26784501Recent trends and perspectives of molecular markers against fungal diseases in wheat
Q92770568Recombination suppression in heterozygotes for a pericentric inversion induces the interchromosomal effect on crossovers in Arabidopsis
Q47251520Unlocking new alleles for leaf rust resistance in the Vavilov wheat collection
Q45840205Wheat Zapper: a flexible online tool for colinearity studies in grass genomes

Search more.