Genome-Wide Identification, Characterization, and Expression Profiling of the Legume Transcription Factor Gene Family

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Genome-Wide Identification, Characterization, and Expression Profiling of the Legume Transcription Factor Gene Family is …
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scholarly articleQ13442814

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P356DOI10.3389/FPLS.2018.01332
P932PMC publication ID6156370
P698PubMed publication ID30283468

P2093author name stringJing Li
Changning Liu
Yueying Li
Jianghua Chen
Liangliang He
P2860cites workGenome structure of the legume, Lotus japonicusQ22066059
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmersQ22122116
The Medicago genome provides insight into the evolution of rhizobial symbiosesQ22122164
Genome sequence of the palaeopolyploid soybeanQ22122200
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phylaQ22122214
Analysis of the genome sequence of the flowering plant Arabidopsis thalianaQ22122387
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0Q24498082
Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genesQ24563620
SMART, a simple modular architecture research tool: identification of signaling domainsQ24597380
The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thalianaQ24800474
Basic local alignment search toolQ25938991
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0Q27860476
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysisQ27860925
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary modelsQ28144403
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotationQ28603064
Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume familyQ28603088
RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptomeQ28743618
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plantsQ28818092
MEME SUITE: tools for motif discovery and searchingQ29547204
Circos: an information aesthetic for comparative genomicsQ29547653
Multiple sequence alignment using ClustalW and ClustalXQ29547698
CDD: NCBI's conserved domain databaseQ29615740
Gene prediction with a hidden Markov model and a new intron submodelQ29616754
RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implicationsQ33358634
KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategiesQ33572322
webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browserQ33756736
Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factorsQ34022473
A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well-supported subclades within the family.Q34190642
BRASSINOSTEROIDS: Essential Regulators of Plant Growth and DevelopmentQ34304462
An RNA-Seq based gene expression atlas of the common beanQ34333041
Integration of brassinosteroid signal transduction with the transcription network for plant growth regulation in ArabidopsisQ34480196
Regulation of brassinosteroid signaling by a GSK3/SHAGGY-like kinaseQ34521124
Legumes: importance and constraints to greater use.Q35088171
Legume natural products: understanding and manipulating complex pathways for human and animal healthQ35088176
GSDS 2.0: an upgraded gene feature visualization serverQ35367182
Biosynthesis and metabolism of brassinosteroidsQ35540295
HMMER web server: 2015 updateQ35622751
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearityQ35888863
It runs in the family: regulation of brassinosteroid signaling by the BZR1-BES1 class of transcription factorsQ36159426
PGDD: a database of gene and genome duplication in plantsQ36491514
Effects of brassinosteroids on the plant responses to environmental stresses.Q37326061
Brassinosteroid signal transduction from receptor kinases to transcription factorsQ37700622
BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responsesQ38331203
Molecular characterization of BZR transcription factor family and abiotic stress induced expression profiling in Brassica rapaQ39420008
A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana.Q39795918
ExPASy: SIB bioinformatics resource portalQ42232951
A reference genome for common bean and genome-wide analysis of dual domesticationsQ42664823
A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.).Q42773651
Segmental duplications within the Glycine max genome revealed by fluorescence in situ hybridization of bacterial artificial chromosomesQ45000825
β-Amylase1 and β-amylase3 are plastidic starch hydrolases in Arabidopsis That Seem to Be Adapted for Different Thermal, pH, and stress conditionsQ45004222
β-amylase-like proteins function as transcription factors in Arabidopsis, controlling shoot growth and development.Q45898866
Quantitative longitudinal analysis of T cell receptor repertoire expression in HIV-infected patients on antiretroviral and interleukin-2 therapyQ46487774
Nuclear-localized BZR1 mediates brassinosteroid-induced growth and feedback suppression of brassinosteroid biosynthesisQ48307592
Using shared genomic synteny and shared protein functions to enhance the identification of orthologous gene pairs.Q48520805
iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases.Q51415607
A gene expression atlas of the model legume Medicago truncatula.Q51959632
The molecular clock revisited: the rate of synonymous vs. replacement change in Drosophila.Q52904916
Synteny and Collinearity in Plant GenomesQ56029855
Establishment of theLotus japonicusGene Expression Atlas (LjGEA) and its use to explore legume seed maturationQ58001659
The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional ActivationQ58036560
BES1 Accumulates in the Nucleus in Response to Brassinosteroids to Regulate Gene Expression and Promote Stem ElongationQ59303786
A new class of transcription factors mediates brassinosteroid-regulated gene expression in ArabidopsisQ81339021
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P407language of work or nameEnglishQ1860
P304page(s)1332
P577publication date2018-01-01
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleGenome-Wide Identification, Characterization, and Expression Profiling of the Legume Transcription Factor Gene Family
P478volume9

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cites work (P2860)
Q64057155Genome-Wide Identification, Expression Profile, and Alternative Splicing Analysis of the Brassinosteroid-Signaling Kinase (BSK) Family Genes in
Q90076368Genome-wide identification of Diacylglycerol Acyltransferases (DGAT) family genes influencing Milk production in Buffalo
Q64059677Genome-wide identification, characterization, and expression patterns of the BZR transcription factor family in sugar beet (Beta vulgaris L.)

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