GWAS Analysis and QTL Identification of Fiber Quality Traits and Yield Components in Upland Cotton Using Enriched High-Density SNP Markers

scientific article published in 2018

GWAS Analysis and QTL Identification of Fiber Quality Traits and Yield Components in Upland Cotton Using Enriched High-Density SNP Markers is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3389/FPLS.2018.01067
P932PMC publication ID6157485
P698PubMed publication ID30283462

P2093author name stringQi Zhang
Zhen Zhang
Aiying Liu
Haihong Shang
Junwen Li
Juwu Gong
Qun Ge
Wankui Gong
Youlu Yuan
Yuzhen Shi
Xianghui Xiao
Abdul Hafeez
Li Duan
Quanwei Lu
Xiaoying Deng
Quanjia Chen
Xiao Jiang
Hongwei Geng
Ruixian Liu
Xianyan Zou
Jingtao Pan
Shaoqi Li
Muhammad S Iqbal
P2860cites workFinding the missing heritability of complex diseasesQ22122198
Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium sppQ28647984
Leveraging models of cell regulation and GWAS data in integrative network-based association studiesQ28704307
Common and rare variants in multifactorial susceptibility to common diseasesQ29616282
Common features of segregation distortion in plants and animalsQ30310701
Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel.Q30621206
Construction and analysis of high-density linkage map using high-throughput sequencing dataQ30829500
Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.).Q31162248
Association mapping for epistasis and environmental interaction of yield traits in 323 cotton cultivars under 9 different environmentsQ33583845
pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studiesQ33701728
Precision mapping of quantitative trait lociQ33962819
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.Q34504872
Variations and transmission of QTL alleles for yield and fiber qualities in upland cotton cultivars developed in ChinaQ34611883
A comprehensive meta QTL analysis for fiber quality, yield, yield related and morphological traits, drought tolerance, and disease resistance in tetraploid cottonQ35038497
Favorable QTL alleles for yield and its components identified by association mapping in Chinese Upland cotton cultivarsQ35079985
Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding linesQ35101737
Genome sequence of the cultivated cotton Gossypium arboreumQ35170209
Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativaQ35367001
Rare and common variants: twenty argumentsQ35533255
The MYB transcription factor GhMYB25 regulates early fibre and trichome development.Q51753306
Identification of GhMYB109 encoding a R2R3 MYB transcription factor that expressed specifically in fiber initials and elongating fibers of cotton (Gossypium hirsutum L.)Q52098579
Toward sequencing cotton (Gossypium) genomes.Q54301690
Genetic Map Construction and Fiber Quality QTL Mapping Using the CottonSNP80K Array in Upland Cotton.Q54950010
Inheritance and QTL mapping of Fusarium wilt race 4 resistance in cottonQ57116816
Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolutionQ57177334
RFLP genetic linkage maps from four F(2.3) populations and a joinmap of Gossypium hirsutum LQ78971211
Cloning and characterization of a calcium dependent protein kinase gene associated with cotton fiber developmentQ81946448
Identification of associations between SSR markers and fiber traits in an exotic germplasm derived from multiple crosses among Gossypium tetraploid speciesQ83634329
A new interspecific, Gossypium hirsutum x G. barbadense, RIL population: towards a unified consensus linkage map of tetraploid cottonQ83706901
QTL Mapping for Fiber and Yield Traits in Upland Cotton under Multiple EnvironmentsQ35673994
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panelQ35705748
Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line populationQ35948373
Construction of a high-density genetic map by specific locus amplified fragment sequencing (SLAF-seq) and its application to Quantitative Trait Loci (QTL) analysis for boll weight in upland cotton (Gossypium hirsutum.).Q35986448
An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations.Q36067252
Identification of favorable SNP alleles and candidate genes for traits related to early maturity via GWAS in upland cottonQ36117293
Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studiesQ36264946
High-Density SNP Map Construction and QTL Identification for the Apetalous Character in Brassica napus L.Q36396534
Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodologyQ36500791
Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in ChinaQ36899262
QTL analysis for early-maturing traits in cotton using two upland cotton (Gossypium hirsutum L.) crossesQ36944448
Advances in molecular marker techniques and their applications in plant sciencesQ37075960
Genome-Wide SNP Linkage Mapping and QTL Analysis for Fiber Quality and Yield Traits in the Upland Cotton Recombinant Inbred Lines PopulationQ37239366
Quantitative Trait Locus Mapping for Verticillium wilt Resistance in an Upland Cotton Recombinant Inbred Line Using SNP-Based High Density Genetic Map.Q37737623
Rare Variant Association Analysis Methods for Complex TraitsQ37806780
High-density 80 K SNP array is a powerful tool for genotyping G. hirsutum accessions and genome analysisQ38611375
Enriching an intraspecific genetic map and identifying QTL for fiber quality and yield component traits across multiple environments in Upland cotton (Gossypium hirsutum L.).Q38667064
Detection and validation of one stable fiber strength QTL on c9 in tetraploid cottonQ38875192
Genome-wide association study (GWAS) of carbon isotope ratio (δ13C) in diverse soybean [Glycine max (L.) Merr.] genotypes.Q38971827
Methodological implementation of mixed linear models in multi-locus genome-wide association studiesQ38980608
Metabolite and mineral analyses of cotton near-isogenic lines introgressed with QTLs for productivity and drought-related traitsQ39172884
MapChart: software for the graphical presentation of linkage maps and QTLsQ39605798
Maize association population: a high-resolution platform for quantitative trait locus dissectionQ40364631
Genome-wide association study discovered genetic variation and candidate genes of fibre quality traits in Gossypium hirsutum L.Q40989995
Construction of a high-density genetic map and lint percentage and cottonseed nutrient trait QTL identification in upland cotton (Gossypium hirsutum L.).Q41184162
Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G. hirsutum × G. barbadense populations.Q41250453
A R2R3-MYB transcription factor that is specifically expressed in cotton (Gossypium hirsutum) fibers affects secondary cell wall biosynthesis and deposition in transgenic ArabidopsisQ41656788
Genetic structure, linkage disequilibrium and association mapping of Verticillium wilt resistance in elite cotton (Gossypium hirsutum L.) germplasm populationQ41813736
GIGANTUS1 (GTS1), a member of Transducin/WD40 protein superfamily, controls seed germination, growth and biomass accumulation through ribosome-biogenesis protein interactions in Arabidopsis thalianaQ41915673
Population structure and genetic basis of the agronomic traits of upland cotton in China revealed by a genome-wide association study using high-density SNPsQ42373457
Cotton GhMYB7 is predominantly expressed in developing fibers and regulates secondary cell wall biosynthesis in transgenic ArabidopsisQ42488003
Molecular mapping of Verticillium wilt resistance QTL clustered on chromosomes D7 and D9 in upland cottonQ43645766
Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping populationQ44859528
Dwarf8 polymorphisms associate with variation in flowering timeQ44875638
Genome-wide association studies of 14 agronomic traits in rice landraces.Q45908136
Association analysis of fiber quality traits and exploration of elite alleles in Upland cotton cultivars/accessions (Gossypium hirsutum L.).Q46946000
Molecular diversity and association mapping of fiber quality traits in exotic G. hirsutum L. germplasm.Q47866683
The cotton ACTIN1 gene is functionally expressed in fibers and participates in fiber elongationQ48149738
Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvementQ48198330
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P407language of work or nameEnglishQ1860
P921main subjectgenome-wide association studyQ1098876
P304page(s)1067
P577publication date2018-01-01
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleGWAS Analysis and QTL Identification of Fiber Quality Traits and Yield Components in Upland Cotton Using Enriched High-Density SNP Markers
P478volume9

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cites work (P2860)
Q92539169Fiber Quality Improvement in Upland Cotton (Gossypium hirsutum L.): Quantitative Trait Loci Mapping and Marker Assisted Selection Application
Q99709699Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods
Q64236545Identification of Loci and Candidate Genes Responsible for Fiber Length in Upland Cotton ( L.) via Association Mapping and Linkage Analyses
Q92851030Identification of candidate genes for key fibre-related QTLs and derivation of favourable alleles in Gossypium hirsutum recombinant inbred lines with G. barbadense introgressions
Q61449955Identifying Functional Genes Influencing Fiber Quality
Q89965928Linkage Analysis and Multi-Locus Genome-Wide Association Studies Identify QTNs Controlling Soybean Plant Height
Q59792158Multi-Locus Genome-Wide Association Studies for 14 Main Agronomic Traits in Barley

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