Identification and characterization of NF-Y gene family in walnut (Juglans regia L.)

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Identification and characterization of NF-Y gene family in walnut (Juglans regia L.) is …
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scholarly articleQ13442814

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P356DOI10.1186/S12870-018-1459-2
P932PMC publication ID6199752
P698PubMed publication ID30352551

P50authorShaowen QuanQ87359812
P2093author name stringLi Zhou
Li Ma
Hang Xu
Yang Qin
Jianxin Niu
P2860cites workBLAST+: architecture and applicationsQ21284368
Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitinationQ24309698
The NF-YB/NF-YC structure gives insight into DNA binding and transcription regulation by CCAAT factor NF-YQ24313313
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0Q24498082
Endoplasmic reticulum stress-induced formation of transcription factor complex ERSF including NF-Y (CBF) and activating transcription factors 6alpha and 6beta that activates the mammalian unfolded protein responseQ24548363
Full-length transcriptome assembly from RNA-Seq data without a reference genomeQ24620766
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationQ24627354
Predicting functional gene links from phylogenetic-statistical analyses of whole genomesQ24811440
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
The promiscuous life of plant NUCLEAR FACTOR Y transcription factorsQ27010412
Genetic regulation of flowering time in annual and perennial plantsQ27021592
Clustal W and Clustal X version 2.0Q27860517
Profile hidden Markov modelsQ27860536
Intron-exon organization of the NF-Y genes. Tissue-specific splicing modifies an activation domainQ28116280
The molecular biology of the CCAAT-binding factor NF-YQ28138416
Recombinant rat CBF-C, the third subunit of CBF/NFY, allows formation of a protein-DNA complex with CBF-A and CBF-B and with yeast HAP2 and HAP3Q28582172
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plantsQ28818092
MEME SUITE: tools for motif discovery and searchingQ29547204
Deciphering key features in protein structures with the new ENDscript serverQ29617219
The Arabidopsis thaliana Nuclear Factor Y Transcription FactorsQ30397882
The assembly of the CAAT-box binding complex at a photosynthesis gene promoter is regulated by light, cytokinin, and the stage of the plastids.Q30822805
LEAFY COTYLEDON1 Is an Essential Regulator of Late Embryogenesis and Cotyledon Identity in ArabidopsisQ33337646
MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatulaQ33343414
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexityQ33346337
A miR169 isoform regulates specific NF-YA targets and root architecture in ArabidopsisQ33357864
Identification and characterization of NF-Y transcription factor families in the monocot model plant Brachypodium distachyonQ33955382
AtHAP5A modulates freezing stress resistance in Arabidopsis through binding to CCAAT motif of AtXTH21.Q46904904
A distal CCAAT/NUCLEAR FACTOR Y complex promotes chromatin looping at the FLOWERING LOCUS T promoter and regulates the timing of flowering in ArabidopsisQ46921949
Arabidopsis LEAFY COTYLEDON1 is sufficient to induce embryo development in vegetative cellsQ47872562
CONSTANS and the CCAAT box binding complex share a functionally important domain and interact to regulate flowering of ArabidopsisQ48083169
The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA.Q48091512
Arabidopsis transcription factor genes NF-YA1, 5, 6, and 9 play redundant roles in male gametogenesis, embryogenesis, and seed development.Q50787681
Genome-wide characterization and expression analysis of citrus NUCLEAR FACTOR-Y (NF-Y) transcription factors identified a novel NF-YA gene involved in drought-stress response and tolerance.Q55318911
The transcriptional activity of the CCAAT-binding factor CBF is mediated by two distinct activation domains, one in the CBF-B subunit and the other in the CBF-C subunitQ71143360
Over-expression of HAP3b enhances primary root elongation in ArabidopsisQ83402065
Gene Family Analysis of the Arabidopsis NF-YA Transcription Factors Reveals Opposing Abscisic Acid Responses During Seed GerminationQ34111855
Functional and transcriptome analysis reveals an acclimatization strategy for abiotic stress tolerance mediated by Arabidopsis NF-YA family members.Q34464795
Role of the CCAAT-binding protein CBF/NF-Y in transcriptionQ34470368
NFYA1 is involved in regulation of postgermination growth arrest under salt stress in ArabidopsisQ34700171
Arabidopsis LEAFY COTYLEDON1 represents a functionally specialized subunit of the CCAAT binding transcription factorQ34763885
The Arabidopsis NF-YA3 and NF-YA8 genes are functionally redundant and are required in early embryogenesisQ35058681
Genome-wide expression analysis of soybean NF-Y genes reveals potential function in development and drought responseQ35619628
Genome-wide analysis of tomato NF-Y factors and their role in fruit ripeningQ35888295
Identification and expression profile analysis of NUCLEAR FACTOR-Y families in Physcomitrella patensQ35969922
Plant nuclear factor Y (NF-Y) B subunits confer drought tolerance and lead to improved corn yields on water-limited acresQ36082203
Genome-wide identification and characterization of the NF-Y gene family in grape (vitis vinifera L.).Q36102322
Arabidopsis LEAFY COTYLEDON1 controls cell fate determination during post-embryonic developmentQ36241939
Three classes of mutations in the A subunit of the CCAAT-binding factor CBF delineate functional domains involved in the three-step assembly of the CBF-DNA complexQ36556847
Involvement of miR169 in the nitrogen-starvation responses in ArabidopsisQ36650326
Approaches for extracting practical information from gene co-expression networks in plant biologyQ36717674
CCAAT-box binding transcription factors in plants: Y so many?Q38039662
The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance.Q38288532
AtHAP3b plays a crucial role in the regulation of flowering time in Arabidopsis during osmotic stressQ38295905
A putative CCAAT-binding transcription factor is a regulator of flowering timing in Arabidopsis.Q38300012
bZIP28 and NF-Y transcription factors are activated by ER stress and assemble into a transcriptional complex to regulate stress response genes in ArabidopsisQ38346003
TaNF-YC11, one of the light-upregulated NF-YC members in Triticum aestivum, is co-regulated with photosynthesis-related genes.Q38346858
TaNF-YB3 is involved in the regulation of photosynthesis genes in Triticum aestivum.Q38503415
Overexpression of a rice heme activator protein gene (OsHAP2E) confers resistance to pathogens, salinity and drought, and increases photosynthesis and tiller numberQ38866961
Y flowering? Regulation and activity of CONSTANS and CCT-domain proteins in Arabidopsis and crop species.Q38994102
Plant NF-Y transcription factors: Key players in plant-microbe interactions, root development and adaptation to stressQ39035099
Homologous NF-YC2 subunit from Arabidopsis and tobacco is activated by photooxidative stress and induces floweringQ39039569
The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessibleQ39125771
NF-YC3, NF-YC4 and NF-YC9 are required for CONSTANS-mediated, photoperiod-dependent flowering in Arabidopsis thalianaQ39152124
Identification and characterization of NF-Y transcription factor families in Canola (Brassica napus L.).Q39178410
Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunitsQ39432771
Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum.Q39489888
Annotation, phylogeny and expression analysis of the nuclear factor Y gene families in common bean (Phaseolus vulgaris).Q41928990
Studies on differential nuclear translocation mechanism and assembly of the three subunits of the Arabidopsis thaliana transcription factor NF-Y.Q44813282
LEAFY COTYLEDON1-LIKE defines a class of regulators essential for embryo developmentQ46174593
The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenolsQ46553634
The Nuclear Factor Y subunits NF-YB2 and NF-YB3 play additive roles in the promotion of flowering by inductive long-day photoperiods in Arabidopsis.Q46878260
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesedgeRQ113334690
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectJuglans regiaQ46871
P304page(s)255
P577publication date2018-10-23
P1433published inBMC Plant BiologyQ15760766
P1476titleIdentification and characterization of NF-Y gene family in walnut (Juglans regia L.).
P478volume18