scholarly article | Q13442814 |
P356 | DOI | 10.1002/CHEM.200401120 |
P698 | PubMed publication ID | 15880545 |
P50 | author | Chris Oostenbrink | Q30505204 |
Wilfred F van Gunsteren | Q52153822 | ||
P2860 | cites work | Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid | Q1895685 |
Structure of a B-DNA dodecamer: conformation and dynamics | Q24635075 | ||
The B-DNA dodecamer at high resolution reveals a spine of water on sodium | Q27758585 | ||
Synthetically modified DNAs as substrates for polymerases | Q34096433 | ||
Structure and Base Pairing Properties of a Replicable Nonpolar Isostere for Deoxyadenosine | Q34129242 | ||
Naphthalene, Phenanthrene, and Pyrene as DNA Base Analogues: Synthesis, Structure, and Fluorescence in DNA. | Q34143828 | ||
Factors Contributing to Aromatic Stacking in Water: Evaluation in the Context of DNA. | Q34144275 | ||
Free energy via molecular simulation: applications to chemical and biomolecular systems | Q38648060 | ||
Hoogsteen-based parallel-stranded duplexes of DNA. Effect of 8-amino-purine derivatives. | Q43922829 | ||
Free energies of binding of polychlorinated biphenyls to the estrogen receptor from a single simulation | Q44706733 | ||
Bending of oligonucleotides containing an isosteric nucleobase: 7-deaza-2'-deoxyadenosine replacing dA within d(A)6 tracts | Q46886593 | ||
Single-step perturbations to calculate free energy differences from unphysical reference states: limits on size, flexibility, and character | Q47442749 | ||
Why is it so difficult to simulate entropies, free energies, and their differences? | Q49297337 | ||
An improved nucleic acid parameter set for the GROMOS force field | Q56225273 | ||
Extremely precise free energy calculations of amino acid side chain analogs: Comparison of common molecular mechanics force fields for proteins | Q56776034 | ||
Molecular dynamics with coupling to an external bath | Q57569060 | ||
The GROMOS Biomolecular Simulation Program Package | Q57746723 | ||
Estimating entropies from molecular dynamics simulations | Q58005574 | ||
Simulations of the Estrogen Receptor Ligand-Binding Domain: Affinity of Natural Ligands and Xenoestrogens | Q58005587 | ||
Derivation of an improved simple point charge model for liquid water: SPC/A and SPC/L | Q58616227 | ||
Effect of Ionizing Radiation on Adenine in Aerated and De-Aerated Aqueous Solutions | Q59090625 | ||
P433 | issue | 15 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | general chemistry | Q909510 |
P304 | page(s) | 4340-4348 | |
P577 | publication date | 2005-05-06 | |
P1433 | published in | Chemistry—A European Journal | Q898737 |
P1476 | title | Efficient Calculation of Many Stacking and Pairing Free Energies in DNA from a Few Molecular Dynamics Simulations | |
P478 | volume | 11 |
Q35124317 | Computational model for predicting experimental RNA and DNA nearest-neighbor free energy rankings |
Q50919565 | Estimation of relative binding free energy based on a free energy variational principle for the FKBP-ligand system. |
Q36627376 | Exploring the role of large conformational changes in the fidelity of DNA polymerase beta |
Q41005478 | Free energy analysis and mechanism of base pair stacking in nicked DNA. |
Q36335325 | Intramolecular base stacking of dinucleoside monophosphate anions in aqueous solution |
Q42734930 | On the stability of peptide nucleic acid duplexes in the presence of organic solvents |
Q51115239 | On the use of one-step perturbation to investigate the dependence of NOE-derived atom-atom distance bound violations of peptides upon a variation of force-field parameters. |
Q35212044 | Prechemistry versus preorganization in DNA replication fidelity |
Q27657790 | Structural Perturbations Induced by the α-Anomer of the Aflatoxin B 1 Formamidopyrimidine Adduct in Duplex and Single-Strand DNA |
Q38073986 | Why nature really chose phosphate |
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