scholarly article | Q13442814 |
P8978 | DBLP publication ID | journals/cphysics/EisenmengerHHH06 |
P356 | DOI | 10.1016/J.CPC.2005.10.013 |
P894 | zbMATH Open document ID | 1196.82046 |
P2093 | author name string | Frank Eisenmenger | |
Chin-Kun Hu | |||
Shura Hayryan | |||
Ulrich H.E. Hansmann | |||
P2860 | cites work | The Protein Data Bank | Q24515306 |
Satisfying hydrogen bonding potential in proteins | Q27860940 | ||
ICM?A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation | Q29010774 | ||
ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations | Q29396390 | ||
Energetic coupling between DNA bending and base pair opening | Q33651506 | ||
Characteristic temperatures of folding of a small peptide | Q36591460 | ||
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations | Q53340989 | ||
AMBER: Assisted model building with energy refinement. A general program for modeling molecules and their interactions | Q53341450 | ||
A new analytical method for computing solvent-accessible surface area of macromolecules and its gradients | Q58429806 | ||
[SMMP] A modern package for simulation of proteins | Q58429998 | ||
P433 | issue | 5 | |
P921 | main subject | software | Q7397 |
open-source software | Q1130645 | ||
software package | Q1995545 | ||
P6104 | maintained by WikiProject | WikiProject Mathematics | Q8487137 |
P304 | page(s) | 422-429 | |
P577 | publication date | 2006-03-01 | |
P1433 | published in | Computer Physics Communications | Q5157466 |
P1476 | title | An enhanced version of SMMP—open-source software package for simulation of proteins | |
P478 | volume | 174 |
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Q34019261 | Charge density distributions derived from smoothed electrostatic potential functions: design of protein reduced point charge models |
Q62570721 | Coarse Point Charge Models For Proteins From Smoothed Molecular Electrostatic Potentials |
Q46303997 | Comparison of predicted native structures of Met-enkephalin based on various accessible-surface-area solvent models |
Q51925984 | Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations |
Q30370678 | Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes. |
Q35062379 | Evaluation of reduced point charge models of proteins through Molecular Dynamics simulations: application to the Vps27 UIM-1-Ubiquitin complex. |
Q30394577 | Fast and Accurate Accessible Surface Area Prediction Without a Sequence Profile |
Q54403688 | Free-energy-driven folding and thermodynamics of the 67-residue protein GS-alpha3W--a large-scale Monte Carlo study. |
Q37183759 | Hydrophobic condensation and modular assembly model of protein folding. |
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Q61730766 | The Mont-Blanc Prototype: An Alternative Approach for HPC Systems |
Q37279490 | Thermostability of the N-terminal RNA-binding domain of the SARS-CoV nucleocapsid protein: experiments and numerical simulations |
Q45955724 | Three-dimensional protein structure prediction: Methods and computational strategies. |
Q37361846 | Toward reliable simulations of protein folding, misfolding and aggregation |
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