Universal genotyping reveals province-level differences in the molecular epidemiology of tuberculosis

Universal genotyping reveals province-level differences in the molecular epidemiology of tuberculosis is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PONE.0214870
P932PMC publication ID6447219
P698PubMed publication ID30943250

P50authorJennifer L. GardyQ18359279
Alex Marchand-AustinQ42208718
Victoria J. CookQ88211158
P2093author name stringFrances B Jamieson
Patrick Tang
David Roth
Mabel Rodrigues
James Johnston
Clare Kong
Danielle Jorgensen
Jennifer L Guthrie
Karen Lam
Kirby Cronin
Daria Pyskir
P2860cites workA clonal outbreak of tuberculosis in a homeless population in the interior of British Columbia, Canada, 2008-2015.Q40896314
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Whole-genome sequencing of the Mycobacterium tuberculosis Manila sublineage results in less clustering and better resolution than mycobacterial interspersed repetitive-unit-variable-number tandem-repeat (MIRU-VNTR) typing and spoligotypingQ42932586
The molecular epidemiology of tuberculosis in western Canada.Q44316289
Tuberculosis contact investigation and DNA fingerprint surveillance in The Netherlands: 6 years' experience with nation-wide cluster feedback and cluster monitoring.Q44900077
Molecular Epidemiology of Tuberculosis in British Columbia, Canada - A 10-Year Retrospective StudyQ47720532
TB-Lineage: an online tool for classification and analysis of strains of Mycobacterium tuberculosis complex.Q53646418
Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 IsolatesQ56880529
A Quantitative Evaluation of MIRU-VNTR Typing Against Whole-Genome Sequencing for Identifying Mycobacterium tuberculosis Transmission: A Prospective Observational Cohort StudyQ58805098
Molecular epidemiological approaches to study the epidemiology of tuberculosis in low-incidence settings receiving immigrantsQ82278413
Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosisQ24672664
Host-pathogen coevolution in human tuberculosisQ27691288
Whole-genome sequencing and social-network analysis of a tuberculosis outbreakQ29614802
Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies.Q30885956
A joint cross-border investigation of a cluster of multidrug-resistant tuberculosis in Austria, Romania and Germany in 2014 using classic, genotyping and whole genome sequencing methods: lessons learntQ33601686
Genome analysis shows a common evolutionary origin for the dominant strains of Mycobacterium tuberculosis in a UK South Asian communityQ34239828
PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods.Q34262338
Prospective evaluation of a complex public health intervention: lessons from an initial and follow-up cross-sectional survey of the tuberculosis strain typing service in EnglandQ34325944
Marked microevolution of a unique Mycobacterium tuberculosis strain in 17 years of ongoing transmission in a high risk populationQ34535653
Comparison between RFLP and MIRU-VNTR genotyping of Mycobacterium tuberculosis strains isolated in Stockholm 2009 to 2011.Q35147883
Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex ParadigmQ35685931
Relationship between Mycobacterium tuberculosis genotype and the clinical phenotype of pulmonary and meningeal tuberculosisQ36539881
Clustering of tuberculosis cases based on variable-number tandem-repeat typing in relation to the population structure of Mycobacterium tuberculosis in the NetherlandsQ36971190
Standard Genotyping Overestimates Transmission of Mycobacterium tuberculosis among Immigrants in a Low-Incidence CountryQ37040514
Recent TB transmission, clustering and predictors of large clusters in London, 2010-2012: results from first 3 years of universal MIRU-VNTR strain typingQ37156356
Cross-jurisdictional transmission of Mycobacterium tuberculosis in Maryland and Washington, D C, 1996-2000, linked to the homelessQ37334524
A tuberculosis outbreak fueled by cross-border travel and illicit substances: Nevada and Arizona.Q37391721
Technology and tuberculosis control: the OUT-TB Web experience.Q38824879
The epidemiology of tuberculosis in San Francisco. A population-based study using conventional and molecular methodsQ39388568
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P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectepidemiology of tuberculosisQ3589138
P304page(s)e0214870
P577publication date2019-01-01
P1433published inPLOS OneQ564954
P1476titleUniversal genotyping reveals province-level differences in the molecular epidemiology of tuberculosis
P478volume14

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